Pcdha1 cDNA ORF clone, Mus musculus(house mouse)

Gene
Clones
gRNAs

Summary

Gene Symbol	Pcdha1
Entrez Gene ID	116731
Full Name	protocadherin alpha 1
Synonyms	CNR
General protein information	Preferred Names protocadherin alpha 1 Names protocadherin alpha-1 protocadherin alpha 2
Gene Type	protein-coding
Organism	Mus musculus(house mouse)
Genome	Chromosome: 18 Map Location: 18\|18 B2-B3

mRNA and Protein(s)

mRNA	Protein	Name
NM_054072.1	NP_473413.1	protocadherin alpha-1 precursor

Pathways from BioSystems

Homologies

Homo sapiens (human)	PCDHA1	NP_061723.1
Rattus norvegicus (Norway rat)	Pcdha1	NP_955797.1
	PCDHA1	XP_001088861.1
Mus musculus (house mouse)	Pcdha1	NP_473413.1

Gene Ontology
Bibliography

Related articles in PubMed

Developmental epigenetic modification regulates stochastic expression of clustered protocadherin genes, generating single neuron diversity.
Toyoda S, Kawaguchi M, Kobayashi T, Tarusawa E, Toyama T, Okano M, Oda M, Nakauchi H, Yoshimura Y, Sanbo M, Hirabayashi M, Hirayama T, Hirabayashi T, Yagi T
Neuron82(1)94-108(2014 Apr)

Epigenetic functions of smchd1 repress gene clusters on the inactive X chromosome and on autosomes.
Gendrel AV, Tang YA, Suzuki M, Godwin J, Nesterova TB, Greally JM, Heard E, Brockdorff N
Molecular and cellular biology33(16)3150-65(2013 Aug)

A variable cytoplasmic domain segment is necessary for ?-protocadherin trafficking and tubulation in the endosome/lysosome pathway.
O'Leary R, Reilly JE, Hanson HH, Kang S, Lou N, Phillips GR
Molecular biology of the cell22(22)4362-72(2011 Nov)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Pcdha1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Pcdha1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OMu09551	NM_054072.1 Latest version!	Mus musculus protocadherin alpha 1 (Pcdha1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$559.30 $799.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Pcdha1 ( NM_054072.1 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_473413.1 Mus musculus protocadherin alpha 1 (Pcdha1), mRNA.

Price & Availability↑

CloneID	OMu09551
Clone ID Related Accession (Same CDS sequence)	NM_054072.1
Accession Version	NM_054072.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2847bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-09-10
Organism	Mus musculus(house mouse)
Product	protocadherin alpha-1 precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY013756.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AY013756.1, BP768431.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131, SAMN01164132 [ECO:0000348] ##Evidence-Data-END##

ATGCTGTTTT CCAGGCTCCG AGGCCTGAGA GCCCGGCGCC TGCTCTTGTT CTCGCTTCTG 
TTTCTTGCAG CCTGGGAGGC AGGGAGCGGC CAGATTCATT ACTCTGTCCC AGAGGAAGCC 
AAACACGGCA CCTTTGTGGG CCGCATCGCG CAGGACCTGG GGCTGGAGCT GACGGAGCTG 
GTGCCCCGCC TATTCAGGGT GGCGTCCAAG GATCGCGGGG ACCTTCTGGA GGTAAATCTG 
CAGAATGGCA TTTTGTTTGT GAATTCTCGG ATCGACCGGG AGGAGCTGTG CGGGCGGAGC 
GCGGAGTGTA GCATCCACCT GGAGGTGATC GTGGACAGGC CGCTGCAGGT TTTCCACGTG 
GAGGTGAAGG TTAAAGATAT TAATGATAAC CCACCAGTTT TCAAAGGCGC AGAGCAAAGG 
ATATTTATTC CTGAAAACAG ACAACTAGAT TCACGGTTTC CACTAGAGGG CGCCGTGGAC 
GCAGACATTG GTGCCAATTC TCTTTTAACT TACACGCTGA GCCCCACTGA TTACTTTTCT 
TTAAAGGTAG AGACAACAGA CGAACTCAGT AAATCCCTTT CGCTTGAACT GAGAAAATCT 
TTGGATAGAG AAGAAACACC AGAACTTCAG TTATTACTGA CAGCCACCGA CGGGGGCAAG 
CCAGAGCTGG AGGGGACAGT TCGGCTGCAG ATTACTGTGC TCGATGTTAA TGACAACGCC 
CCACTGTTTG ACCAGGCCAT CTACAGAGCA CAGTTAGTAG AATCTACAGT GAATGGGACA 
TTAGTGACGA CGTTAAATGC CACTGACGCT GATGAAGGTG TTAATGGTGA AGTTGTGTTT 
TCCTTTGGCA ATGACGTTTC TCTTGACATT CAAGAAAAAT TCAATGTGGA TTCTCTTTCA 
GGAGAAATTA GAGTGATCGG TGATCTAGAT TATGAAAAAA CAAAATCCTA TGAAATTCAA 
ATAAAGGCAG TTGATAAAGG GACTCCCTCC ATGTCAAATC ACTGCAAGGT TTTGGTGAAA 
GTACTGGATA TAAATGATAA TGCTCCAGAG CTGTCGATCA CATCCTTGTC TTTGCCCATC 
AAAGAGGATA CTCCACTTAA CACTATCATC GCACTCATCA AGGTGTCCGA CATCGACTCA 
GGTGTCAACG GGCAGGTGAC CTGCTCCCTA ACTCCTCATG TCCCTTTCAA GTTGGTGTCC 
ACCTTCAAGA ATTACTATTC GCTTGTGCTG GACAGCACCC TGGACCGAGA GACCACAGCG 
GACTATAAGG TGGTGGTGAC AGCCCGCGAC GGGGGCTCGC CCTCGCTGTG GGCCACGGCC 
AGCGTGTCTG TGGAGGTGGC TGACGTGAAC GACAATGCTC CAGTGTTCGC GCAGCCCGAA 
TACACTGTGT TCGTGAAGGA GAACAACCCG CCTGGTGCGC ACATCTTCAC GGTGTCAGCG 
ATGGACGCGG ATGCGCAGGA GAATGCGCTG GTGTCCTACT CGCTGGTGGA GCGGAGGGTG 
GGCGAGCGCT TGCTGTCGAG CTATGTGTCT GTGCACGCGG AGAGCGGCAA GGTGTTCGCG 
CTGCAGCCTC TGGACCATGA GGAGCTGGAG CTGCTGCAGT TCCAGGTGAG CGCGCGGGAT 
GCTGGTGTGC CTGCCCTGGG CAGCAATGTG ACTCTGCAGG TGTTTGTGCT GGACGAGAAT 
GACAATCCAC CCACACTGCT GGGGCCTCAC GCAGGCAGCG CAGTGAGCGA ACTGGTGTCA 
CGGACAATGG GTGCAGGGCA TGTGGTGACA AAGGTGCGCG CGGTGGACGC GGACTCTGGC 
TACAATGCGT GGCTGTCCTA TGAACTACAA CCTCCTACAG GTGGTGCGCG CAACCCGTTT 
CGCGTGGGTC TGTACACTGG TGAGATTAGC ACCACACGCT CCTTAGATGA GGTCGATGTT 
CCACGACAGC GTCTCTTGGT GCTGGTGAAG GACCATGGAG AGCCAATGCT GACTGCTACC 
GCTACCGTGT TGGTATCTCT GGTGGAAAGC AGTCCGATTC AGAAAGCCTC TTTGCCTGTA 
TTAACCGGTG CAGTGGGTTC CAAGGCATCG CTGGTGGATG TCAACGTGTA CCTGATCATC 
GCCATCTGTG CCGTGTCCAG CCTGTTAGTG CTCACTTTGC TTCTGTACAC AGCGCTGCGC 
TGCTCCGCGA CACCCACTGA TGGAGCCTGT GGTCCGGGGA AGCCCATGCT GGTGTGCTCC 
AGCGCGGTGG GGAGCTGGTC ATACTCGCAG CAGAGGCGAC AGAAGGTGTG CTCTGGAGAG 
GGTCCACCTA AGACCGACCT CATGGCCTTC AGCCCGGGTT TAGCCCCAGG TTTGAACATA 
GCGGAAAGAA GTGACCACGC AGAAGTAAAT TCAGATCTTT CTGGTAATCC CCGGCAGCCC 
AACCCTGACT GGCGCTACTC TGCCTCGCTA AGAGCAGGCA TGCACAGCTC TGTGCACCTG 
GAGGAGGCTG GCATTCTACG GGCTGGTCCA GGAGGGCCTG ATCAGCAGTG GCCAACAGTA 
TCCAGTGCAA CACCAGAACC TGAGGCAGGA GAGGTGTCCC CTCCGGTGGG CGCCGGTGTC 
AACAGCAACA GCTGGACCTT TAAATACGGA CCAGGCAACC CCAAACAGTC CGGTCCCGGT 
GAGTTGCCAG ACAAATTCAT TATCCCAGGA TCTCCTGCAA TCATCTCCAT CCGGCAGGAG 
CCTGCTAACA ACCAAATTGA CAAAAGCGAT TTTATAACCT TCGGCAAAAA GGAGGAGACC 
AAGAAAAAGA AGAAAAAGAA GAAGGGTAAC AAGACCCAGG AGAAAAAAGA GAAAGGGAAC 
AGCACGACGG ACAACAGTGA CCAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_473413.1
CDS	1..2847
Translation	MLFSRLRGLRARRLLLFSLLFLAAWEAGSGQIHYSVPEEAKHGTFVGRIAQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVEVKVKDINDNPPVFKGAEQRIFIPENRQLDSRFPLEGAVDADIGANSLLTYTLSPTDYFSLKVETTDELSKSLSLELRKSLDREETPELQLLLTATDGGKPELEGTVRLQITVLDVNDNAPLFDQAIYRAQLVESTVNGTLVTTLNATDADEGVNGEVVFSFGNDVSLDIQEKFNVDSLSGEIRVIGDLDYEKTKSYEIQIKAVDKGTPSMSNHCKVLVKVLDINDNAPELSITSLSLPIKEDTPLNTIIALIKVSDIDSGVNGQVTCSLTPHVPFKLVSTFKNYYSLVLDSTLDRETTADYKVVVTARDGGSPSLWATASVSVEVADVNDNAPVFAQPEYTVFVKENNPPGAHIFTVSAMDADAQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELELLQFQVSARDAGVPALGSNVTLQVFVLDENDNPPTLLGPHAGSAVSELVSRTMGAGHVVTKVRAVDADSGYNAWLSYELQPPTGGARNPFRVGLYTGEISTTRSLDEVDVPRQRLLVLVKDHGEPMLTATATVLVSLVESSPIQKASLPVLTGAVGSKASLVDVNVYLIIAICAVSSLLVLTLLLYTALRCSATPTDGACGPGKPMLVCSSAVGSWSYSQQRRQKVCSGEGPPKTDLMAFSPGLAPGLNIAERSDHAEVNSDLSGNPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQEPANNQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ

Target ORF information:

RefSeq Version	NM_054072.1
Organism	Mus musculus(house mouse)
Definition	Mus musculus protocadherin alpha 1 (Pcdha1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_054072.1

ORF Insert Sequence:

ATGCTGTTTT CCAGGCTCCG AGGCCTGAGA GCCCGGCGCC TGCTCTTGTT CTCGCTTCTG 
TTTCTTGCAG CCTGGGAGGC AGGGAGCGGC CAGATTCATT ACTCTGTCCC AGAGGAAGCC 
AAACACGGCA CCTTTGTGGG CCGCATCGCG CAGGACCTGG GGCTGGAGCT GACGGAGCTG 
GTGCCCCGCC TATTCAGGGT GGCGTCCAAG GATCGCGGGG ACCTTCTGGA GGTAAATCTG 
CAGAATGGCA TTTTGTTTGT GAATTCTCGG ATCGACCGGG AGGAGCTGTG CGGGCGGAGC 
GCGGAGTGTA GCATCCACCT GGAGGTGATC GTGGACAGGC CGCTGCAGGT TTTCCACGTG 
GAGGTGAAGG TTAAAGATAT TAATGATAAC CCACCAGTTT TCAAAGGCGC AGAGCAAAGG 
ATATTTATTC CTGAAAACAG ACAACTAGAT TCACGGTTTC CACTAGAGGG CGCCGTGGAC 
GCAGACATTG GTGCCAATTC TCTTTTAACT TACACGCTGA GCCCCACTGA TTACTTTTCT 
TTAAAGGTAG AGACAACAGA CGAACTCAGT AAATCCCTTT CGCTTGAACT GAGAAAATCT 
TTGGATAGAG AAGAAACACC AGAACTTCAG TTATTACTGA CAGCCACCGA CGGGGGCAAG 
CCAGAGCTGG AGGGGACAGT TCGGCTGCAG ATTACTGTGC TCGATGTTAA TGACAACGCC 
CCACTGTTTG ACCAGGCCAT CTACAGAGCA CAGTTAGTAG AATCTACAGT GAATGGGACA 
TTAGTGACGA CGTTAAATGC CACTGACGCT GATGAAGGTG TTAATGGTGA AGTTGTGTTT 
TCCTTTGGCA ATGACGTTTC TCTTGACATT CAAGAAAAAT TCAATGTGGA TTCTCTTTCA 
GGAGAAATTA GAGTGATCGG TGATCTAGAT TATGAAAAAA CAAAATCCTA TGAAATTCAA 
ATAAAGGCAG TTGATAAAGG GACTCCCTCC ATGTCAAATC ACTGCAAGGT TTTGGTGAAA 
GTACTGGATA TAAATGATAA TGCTCCAGAG CTGTCGATCA CATCCTTGTC TTTGCCCATC 
AAAGAGGATA CTCCACTTAA CACTATCATC GCACTCATCA AGGTGTCCGA CATCGACTCA 
GGTGTCAACG GGCAGGTGAC CTGCTCCCTA ACTCCTCATG TCCCTTTCAA GTTGGTGTCC 
ACCTTCAAGA ATTACTATTC GCTTGTGCTG GACAGCACCC TGGACCGAGA GACCACAGCG 
GACTATAAGG TGGTGGTGAC AGCCCGCGAC GGGGGCTCGC CCTCGCTGTG GGCCACGGCC 
AGCGTGTCTG TGGAGGTGGC TGACGTGAAC GACAATGCTC CAGTGTTCGC GCAGCCCGAA 
TACACTGTGT TCGTGAAGGA GAACAACCCG CCTGGTGCGC ACATCTTCAC GGTGTCAGCG 
ATGGACGCGG ATGCGCAGGA GAATGCGCTG GTGTCCTACT CGCTGGTGGA GCGGAGGGTG 
GGCGAGCGCT TGCTGTCGAG CTATGTGTCT GTGCACGCGG AGAGCGGCAA GGTGTTCGCG 
CTGCAGCCTC TGGACCATGA GGAGCTGGAG CTGCTGCAGT TCCAGGTGAG CGCGCGGGAT 
GCTGGTGTGC CTGCCCTGGG CAGCAATGTG ACTCTGCAGG TGTTTGTGCT GGACGAGAAT 
GACAATCCAC CCACACTGCT GGGGCCTCAC GCAGGCAGCG CAGTGAGCGA ACTGGTGTCA 
CGGACAATGG GTGCAGGGCA TGTGGTGACA AAGGTGCGCG CGGTGGACGC GGACTCTGGC 
TACAATGCGT GGCTGTCCTA TGAACTACAA CCTCCTACAG GTGGTGCGCG CAACCCGTTT 
CGCGTGGGTC TGTACACTGG TGAGATTAGC ACCACACGCT CCTTAGATGA GGTCGATGTT 
CCACGACAGC GTCTCTTGGT GCTGGTGAAG GACCATGGAG AGCCAATGCT GACTGCTACC 
GCTACCGTGT TGGTATCTCT GGTGGAAAGC AGTCCGATTC AGAAAGCCTC TTTGCCTGTA 
TTAACCGGTG CAGTGGGTTC CAAGGCATCG CTGGTGGATG TCAACGTGTA CCTGATCATC 
GCCATCTGTG CCGTGTCCAG CCTGTTAGTG CTCACTTTGC TTCTGTACAC AGCGCTGCGC 
TGCTCCGCGA CACCCACTGA TGGAGCCTGT GGTCCGGGGA AGCCCATGCT GGTGTGCTCC 
AGCGCGGTGG GGAGCTGGTC ATACTCGCAG CAGAGGCGAC AGAAGGTGTG CTCTGGAGAG 
GGTCCACCTA AGACCGACCT CATGGCCTTC AGCCCGGGTT TAGCCCCAGG TTTGAACATA 
GCGGAAAGAA GTGACCACGC AGAAGTAAAT TCAGATCTTT CTGGTAATCC CCGGCAGCCC 
AACCCTGACT GGCGCTACTC TGCCTCGCTA AGAGCAGGCA TGCACAGCTC TGTGCACCTG 
GAGGAGGCTG GCATTCTACG GGCTGGTCCA GGAGGGCCTG ATCAGCAGTG GCCAACAGTA 
TCCAGTGCAA CACCAGAACC TGAGGCAGGA GAGGTGTCCC CTCCGGTGGG CGCCGGTGTC 
AACAGCAACA GCTGGACCTT TAAATACGGA CCAGGCAACC CCAAACAGTC CGGTCCCGGT 
GAGTTGCCAG ACAAATTCAT TATCCCAGGA TCTCCTGCAA TCATCTCCAT CCGGCAGGAG 
CCTGCTAACA ACCAAATTGA CAAAAGCGAT TTTATAACCT TCGGCAAAAA GGAGGAGACC 
AAGAAAAAGA AGAAAAAGAA GAAGGGTAAC AAGACCCAGG AGAAAAAAGA GAAAGGGAAC 
AGCACGACGG ACAACAGTGA CCAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Developmental epigenetic modification regulates stochastic expression of clustered protocadherin genes, generating single neuron diversity.
Neuron82(1)94-108(2014 Apr)
Toyoda S,Kawaguchi M,Kobayashi T,Tarusawa E,Toyama T,Okano M,Oda M,Nakauchi H,Yoshimura Y,Sanbo M,Hirabayashi M,Hirayama T,Hirabayashi T,Yagi T

Epigenetic functions of smchd1 repress gene clusters on the inactive X chromosome and on autosomes.
Molecular and cellular biology33(16)3150-65(2013 Aug)
Gendrel AV,Tang YA,Suzuki M,Godwin J,Nesterova TB,Greally JM,Heard E,Brockdorff N

A variable cytoplasmic domain segment is necessary for ?-protocadherin trafficking and tubulation in the endosome/lysosome pathway.
Molecular biology of the cell22(22)4362-72(2011 Nov)
O'Leary R,Reilly JE,Hanson HH,Kang S,Lou N,Phillips GR

見積依頼

Eメール

japanmarket@genscript.com

電話

03-6811-6572

FAX

03-6811-6573
050-3174-7589(受注専用)

オンラインフォーム

オンライン注文

Pcdha1 cDNA ORF clone, Mus musculus(house mouse)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

見積依頼

Eメール

電話

FAX

オンラインフォーム

サポート

会社情報

サポート

会社情報