PDE6D cDNA ORF clone, Macaca mulatta(Rhesus monkey)

Gene
Clones
gRNAs

Summary

Gene Symbol	PDE6D
Entrez Gene ID	712629
Full Name	phosphodiesterase 6D
Gene Type	protein-coding
Organism	Macaca mulatta(Rhesus monkey)

mRNA and Protein(s)

mRNA	Protein	Name
XM_015111249.1	XP_014966735.1	retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta isoform X1
NM_001194606.1	NP_001181535.1	retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta
XM_015111249.2	XP_014966735.1	retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta isoform X1

Pathways from BioSystems

Homologies

Homo sapiens (human)	PDE6D	NP_002592.1
Canis lupus familiaris (dog)	PDE6D	NP_001003156.1
Mus musculus (house mouse)	Pde6d	NP_032827.1
Rattus norvegicus (Norway rat)	Pde6d	NP_001102276.1
Gallus gallus (chicken)	PDE6D	XP_422739.3
Drosophila melanogaster (fruit fly)	PrBP	NP_609246.1
Pan troglodytes (chimpanzee)	PDE6D	XP_001144711.1
Danio rerio (zebrafish)	pde6d	NP_001002708.1
	PDE6D	XP_001113642.1
Bos taurus (cattle)	PDE6D	NP_776845.1
Xenopus tropicalis (tropical clawed frog)	pde6d	XP_002937389.1
Anopheles gambiae (African malaria mosquito)	PDE6D_ANOGA	XP_320754.1
Caenorhabditis elegans (roundworm)	pdl-1	NP_495490.1

Gene Ontology
Bibliography

Related articles in PubMed

A new rhesus macaque assembly and annotation for next-generation sequencing analyses.
Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S, Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Mar?ais G, Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA, Norgren RB Jr
Biology direct9(1)20(2014 Oct)

Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques.
Yan G, Zhang G, Fang X, Zhang Y, Li C, Ling F, Cooper DN, Li Q, Li Y, van Gool AJ, Du H, Chen J, Chen R, Zhang P, Huang Z, Thompson JR, Meng Y, Bai Y, Wang J, Zhuo M, Wang T, Huang Y, Wei L, Li J, Wang Z, Hu H, Yang P, Le L, Stenson PD, Li B, Liu X, Ball EV, An N, Huang Q, Zhang Y, Fan W, Zhang X, Li Y, Wang W, Katze MG, Su B, Nielsen R, Yang H, Wang J, Wang X, Wang J
Nature biotechnology29(11)1019-23(2011 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following PDE6D gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PDE6D cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OMb00729	NM_001194606.1 Latest version!	Macaca mulatta phosphodiesterase 6D (PDE6D), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
OMb44746	XM_015111249.2 Latest version!	Macaca mulatta phosphodiesterase 6D (PDE6D), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$104.30 $149.00
View Old Accession Versions >>
OMb44746	XM_015111249.1	Macaca mulatta phosphodiesterase 6D (PDE6D), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$104.30 $149.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

PDE6D ( NM_001194606.1 ) cDNA ORF clone, Macaca mulatta(Rhesus monkey) -> NP_001181535.1 Macaca mulatta phosphodiesterase 6D (PDE6D), mRNA.

Price & Availability↑

CloneID	OMb00729
Clone ID Related Accession (Same CDS sequence)	NM_001194606.1
Accession Version	NM_001194606.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 453bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-11
Organism	Macaca mulatta(Rhesus monkey)
Product	retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from QNVO02000079.1. On Aug 11, 2010 this sequence version replaced XM_001113642.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: JV547387.1, JV584037.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA4688317, SAMEA4688328 [ECO:0000350] ##Evidence-Data-END##

ATGTCAGCCA AGGACGAGCG GGCCAGGGAG ATCCTGAGGG GCTTCAAACT AAATTGGATG 
AACCTTCGGG ATGCTGAAAC AGGGAAGATA CTCTGGCAAG GAACAGAAGA CCTGTCTGTC 
CCTGGTGTGG AGCATGAAGC CCGTGTTCCC AAGAAAATCC TCAAGTGCAA GGCCGTGTCT 
CGAGAACTCA ATTTTTCTTC AACAGAACAA ATGGAAAAAT TCCGCCTGGA ACAAAAAATT 
TACTTCAAAG GGCAATGCCT AGAAGAATGG TTCTTCGAGT TTGGCTTTGT GATCCCTAAC 
TCCACAAATA CCTGGCAGTC CTTGATAGAG GCAGCACCCG AGTCCCAGAT GATGCCAGCA 
AGCGTCTTAA CTGGGAACGT TATCATAGAA ACAAAGTTTT TTGACGACGA TCTTCTTGTA 
AGCACATCCA GAGTGAGACT TTTCTATGTT TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001181535.1
CDS	196..648
Translation	MSAKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRELNFSSTEQMEKFRLEQKIYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASVLTGNVIIETKFFDDDLLVSTSRVRLFYV

Target ORF information:

RefSeq Version	NM_001194606.1
Organism	Macaca mulatta(Rhesus monkey)
Definition	Macaca mulatta phosphodiesterase 6D (PDE6D), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001194606.1

ORF Insert Sequence:

ATGTCAGCCA AGGACGAGCG GGCCAGGGAG ATCCTGAGGG GCTTCAAACT AAATTGGATG 
AACCTTCGGG ATGCTGAAAC AGGGAAGATA CTCTGGCAAG GAACAGAAGA CCTGTCTGTC 
CCTGGTGTGG AGCATGAAGC CCGTGTTCCC AAGAAAATCC TCAAGTGCAA GGCCGTGTCT 
CGAGAACTCA ATTTTTCTTC AACAGAACAA ATGGAAAAAT TCCGCCTGGA ACAAAAAATT 
TACTTCAAAG GGCAATGCCT AGAAGAATGG TTCTTCGAGT TTGGCTTTGT GATCCCTAAC 
TCCACAAATA CCTGGCAGTC CTTGATAGAG GCAGCACCCG AGTCCCAGAT GATGCCAGCA 
AGCGTCTTAA CTGGGAACGT TATCATAGAA ACAAAGTTTT TTGACGACGA TCTTCTTGTA 
AGCACATCCA GAGTGAGACT TTTCTATGTT TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PDE6D ( XM_015111249.1 ) cDNA ORF clone, Macaca mulatta(Rhesus monkey) -> XP_014966735.1 Macaca mulatta phosphodiesterase 6D (PDE6D), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OMb44746
Clone ID Related Accession (Same CDS sequence)	XM_015111249.1 , XM_015111249.2
Accession Version	XM_015111249.1	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 282bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-12-20
Organism	Macaca mulatta(Rhesus monkey)
Product	retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014805371.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTCAGCCA AGGACGAGCG GGCCAGGGAG ATCCTGAGGG GCTTCAAACT AAATTGGATG 
AACCTTCGGG ATGCTGAAAC AGGGAAGATA CTCTGGCAAG GAACAGAAGA CCTGTCTGTC 
CCTGGTGTGG AGCATGAAGC CCGTGTTCCC AAGAAAATCC TCAAGTGCAA GGCCGTGTCT 
CGAGAACTCA ATTTTTCTTC AACAGAACAA ATGGAAAAAT TCCGCCTGGA ACAAAAAATT 
TACTTCAAAG GGCAATGCCT AGAAGTGGGA ACGTTATCAT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_014966735.1
CDS	214..495
Translation	MSAKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRELNFSSTEQMEKFRLEQKIYFKGQCLEVGTLS

Target ORF information:

RefSeq Version	XM_015111249.1
Organism	Macaca mulatta(Rhesus monkey)
Definition	Macaca mulatta phosphodiesterase 6D (PDE6D), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_015111249.1

ORF Insert Sequence:

ATGTCAGCCA AGGACGAGCG GGCCAGGGAG ATCCTGAGGG GCTTCAAACT AAATTGGATG 
AACCTTCGGG ATGCTGAAAC AGGGAAGATA CTCTGGCAAG GAACAGAAGA CCTGTCTGTC 
CCTGGTGTGG AGCATGAAGC CCGTGTTCCC AAGAAAATCC TCAAGTGCAA GGCCGTGTCT 
CGAGAACTCA ATTTTTCTTC AACAGAACAA ATGGAAAAAT TCCGCCTGGA ACAAAAAATT 
TACTTCAAAG GGCAATGCCT AGAAGTGGGA ACGTTATCAT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PDE6D ( XM_015111249.2 ) cDNA ORF clone, Macaca mulatta(Rhesus monkey) -> XP_014966735.1 Macaca mulatta phosphodiesterase 6D (PDE6D), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OMb44746
Clone ID Related Accession (Same CDS sequence)	XM_015111249.1 , XM_015111249.2
Accession Version	XM_015111249.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 282bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-25
Organism	Macaca mulatta(Rhesus monkey)
Product	retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041765.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2019 this sequence version replaced XM_015111249.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTCAGCCA AGGACGAGCG GGCCAGGGAG ATCCTGAGGG GCTTCAAACT AAATTGGATG 
AACCTTCGGG ATGCTGAAAC AGGGAAGATA CTCTGGCAAG GAACAGAAGA CCTGTCTGTC 
CCTGGTGTGG AGCATGAAGC CCGTGTTCCC AAGAAAATCC TCAAGTGCAA GGCCGTGTCT 
CGAGAACTCA ATTTTTCTTC AACAGAACAA ATGGAAAAAT TCCGCCTGGA ACAAAAAATT 
TACTTCAAAG GGCAATGCCT AGAAGTGGGA ACGTTATCAT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_014966735.1
CDS	571..852
Translation	MSAKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRELNFSSTEQMEKFRLEQKIYFKGQCLEVGTLS

Target ORF information:

RefSeq Version	XM_015111249.2
Organism	Macaca mulatta(Rhesus monkey)
Definition	Macaca mulatta phosphodiesterase 6D (PDE6D), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_015111249.2

ORF Insert Sequence:

ATGTCAGCCA AGGACGAGCG GGCCAGGGAG ATCCTGAGGG GCTTCAAACT AAATTGGATG 
AACCTTCGGG ATGCTGAAAC AGGGAAGATA CTCTGGCAAG GAACAGAAGA CCTGTCTGTC 
CCTGGTGTGG AGCATGAAGC CCGTGTTCCC AAGAAAATCC TCAAGTGCAA GGCCGTGTCT 
CGAGAACTCA ATTTTTCTTC AACAGAACAA ATGGAAAAAT TCCGCCTGGA ACAAAAAATT 
TACTTCAAAG GGCAATGCCT AGAAGTGGGA ACGTTATCAT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

A new rhesus macaque assembly and annotation for next-generation sequencing analyses.
Biology direct9(1)20(2014 Oct)
Zimin AV,Cornish AS,Maudhoo MD,Gibbs RM,Zhang X,Pandey S,Meehan DT,Wipfler K,Bosinger SE,Johnson ZP,Tharp GK,Mar?ais G,Roberts M,Ferguson B,Fox HS,Treangen T,Salzberg SL,Yorke JA,Norgren RB Jr

Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques.
Nature biotechnology29(11)1019-23(2011 Oct)
Yan G,Zhang G,Fang X,Zhang Y,Li C,Ling F,Cooper DN,Li Q,Li Y,van Gool AJ,Du H,Chen J,Chen R,Zhang P,Huang Z,Thompson JR,Meng Y,Bai Y,Wang J,Zhuo M,Wang T,Huang Y,Wei L,Li J,Wang Z,Hu H,Yang P,Le L,Stenson PD,Li B,Liu X,Ball EV,An N,Huang Q,Zhang Y,Fan W,Zhang X,Li Y,Wang W,Katze MG,Su B,Nielsen R,Yang H,Wang J,Wang X,Wang J

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PDE6D cDNA ORF clone, Macaca mulatta(Rhesus monkey)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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