| Gene Symbol | commd8 |
| Entrez Gene ID | 108263433 |
| Full Name | COMM domain containing 8 |
| Gene Type | protein-coding |
| Organism | Ictalurus punctatus(channel catfish) |
ORF » Species Summary » Ictalurus punctatus » commd8 cDNA ORF clone
| Gene Symbol | commd8 |
| Entrez Gene ID | 108263433 |
| Full Name | COMM domain containing 8 |
| Gene Type | protein-coding |
| Organism | Ictalurus punctatus(channel catfish) |
| mRNA | Protein | Name |
|---|---|---|
| NM_001200843.2 | NP_001187772.2 | comm domain-containing protein 8 |
| XM_017464202.1 | XP_017319691.1 | COMM domain-containing protein 8 |
Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote.
Liu S, Zhang Y, Zhou Z, Waldbieser G, Sun F, Lu J, Zhang J, Jiang Y, Zhang H, Wang X, Rajendran KV, Khoo L, Kucuktas H, Peatman E, Liu Z
BMC genomics13595(2012 Nov)
Identification and characterization of full-length cDNAs in channel catfish (Ictalurus punctatus) and blue catfish (Ictalurus furcatus).
Chen F, Lee Y, Jiang Y, Wang S, Peatman E, Abernathy J, Liu H, Liu S, Kucuktas H, Ke C, Liu Z
PloS one5(7)e11546(2010 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following commd8 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the commd8 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OIc86163 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001200843.2 | |
| Accession Version | NM_001200843.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 531bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-05-04 | |
| Organism | Ictalurus punctatus(channel catfish) | |
| Product | comm domain-containing protein 8 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from LBML01005459.1. On or before Mar 30, 2018 this sequence version replaced XM_017464202.1, NM_001200843.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: GH657168.1, JT417663.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00116755, SAMN00739092 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGCTCAAAT TGCTCGATAA AATATCTCCA ACTGAGTGTC CTAAACTCTT GCACAGGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001187772.2 |
| CDS | 45..575 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001200843.2 |
1 | ATGCTCAAAT TGCTCGATAA AATATCTCCA ACTGAGTGTC CTAAACTCTT GCACAGGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OIc29027 | |
| Clone ID Related Accession (Same CDS sequence) | XM_017464202.1 | |
| Accession Version | XM_017464202.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 597bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-07-05 | |
| Organism | Ictalurus punctatus(channel catfish) | |
| Product | COMM domain-containing protein 8 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030418.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ictalurus punctatus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGGCTTCA GTCATGTGAC ATGCGTGTCA GCTGATGTGT GGAGGAAAGA GGACCTGCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_017319691.1 |
| CDS | 33..629 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_017464202.1 |
1 | ATGGGCTTCA GTCATGTGAC ATGCGTGTCA GCTGATGTGT GGAGGAAAGA GGACCTGCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote. |
Identification and characterization of full-length cDNAs in channel catfish (Ictalurus punctatus) and blue catfish (Ictalurus furcatus). |