The following OTOP3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the OTOP3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OHu00033 |
|
| Clone ID Related Accession (Same CDS sequence) | NM_178233.2 | |
| Accession Version | NM_178233.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1791bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector |  User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-08-04 | |
| Organism | Homo sapiens(human) | |
| Product | proton channel OTOP3 isoform 1 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BK000568.2 and AC087651.19. On Jan 16, 2013 this sequence version replaced NM_178233.1. Transcript Variant: This variant (1) encodes the longer isoform (1). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BK000568.2 [ECO:0000332] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. | |
1 | ATGGGCCGCG GAGCCCGAGC GGCGGCTGCG CAGTCCCGCT GGGGGAGGGC GTCGCGGGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_839947.1 |
| CDS | 1..1791 |
| Translation |
Target ORF information:
Target ORF information:
|
 NM_178233.2 |
1 | ATGGGCCGCG GAGCCCGAGC GGCGGCTGCG CAGTCCCGCT GGGGGAGGGC GTCGCGGGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OHu10662 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001272005.1 , NM_001272005.2 | |
| Accession Version | NM_001272005.1 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1737bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2018-06-14 | |
| Organism | Homo sapiens(human) | |
| Product | proton channel OTOP3 isoform 2 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BK000568.2, AB593153.1 and AC087651.19. Transcript Variant: This variant (2) uses alternate splice sites at the end of two exons compared to variant 1. The resulting isoform (2) has a shorter and distinct N-terminus compared to isoform 1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AB593153.1, SRR1660803.37083.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2144835, SAMEA2147975 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. | |
1 | ATGCCTCTCC CGGCCTCAGC CCCTGCTGAG GCTACACCCA TGCCTTCTTC AGAAGCACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001258934.1 |
| CDS | 121..1857 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001272005.1 |
1 | ATGCCTCTCC CGGCCTCAGC CCCTGCTGAG GCTACACCCA TGCCTTCTTC AGAAGCACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OHu10662 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001272005.1 , NM_001272005.2 | |
| Accession Version | NM_001272005.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1737bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-10-24 | |
| Organism | Homo sapiens(human) | |
| Product | proton channel OTOP3 isoform 2 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AB593153.1, BK000568.2 and AC087651.19. On May 17, 2019 this sequence version replaced NM_001272005.1. Transcript Variant: This variant (2) uses alternate splice sites at the end of two exons compared to variant 1. The resulting isoform (2) has a shorter and distinct N-terminus compared to isoform 1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AB593153.1, SRR1660803.37083.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2144835, SAMEA2147975 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000328801.6/ ENSP00000328090.5 RefSeq Select criteria :: based on conservation, expression ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. | |
1 | ATGCCTCTCC CGGCCTCAGC CCCTGCTGAG GCTACACCCA TGCCTTCTTC AGAAGCACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001258934.1 |
| CDS | 25..1761 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001272005.2 |
1 | ATGCCTCTCC CGGCCTCAGC CCCTGCTGAG GCTACACCCA TGCCTTCTTC AGAAGCACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OHu79495 | |
| Clone ID Related Accession (Same CDS sequence) | XM_011524744.2 | |
| Accession Version | XM_011524744.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1704bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-12-05 | |
| Organism | Homo sapiens(human) | |
| Product | proton channel OTOP3 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000017.11) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_011524744.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCCTCTCC CGGCCTCAGA AGCACAGGAG ACTGAAGCAG CCCCGGAGAA GGAGAACCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_011523046.1 |
| CDS | 84..1787 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_011524744.2 |
1 | ATGCCTCTCC CGGCCTCAGA AGCACAGGAG ACTGAAGCAG CCCCGGAGAA GGAGAACCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Full-length transcriptome analysis of human retina-derived cell lines ARPE-19 and Y79 using the vector-capping method. |
Non-syndromic vestibular disorder with otoconial agenesis in tilted/mergulhador mice caused by mutations in otopetrin 1. |
