SMYD1 cDNA ORF clone, Echinops telfairi(small Madagascar hedgehog)

Gene
Clones
gRNAs

Summary

Gene Symbol	SMYD1
Entrez Gene ID	101643197
Full Name	SET and MYND domain containing 1
Gene Type	protein-coding
Organism	Echinops telfairi(small Madagascar hedgehog)

mRNA and Protein(s)

mRNA	Protein	Name
XM_004707945.1	XP_004708002.1	histone-lysine N-methyltransferase SMYD1 isoform X1
XM_030888478.1	XP_030744338.1	histone-lysine N-methyltransferase SMYD1 isoform X2

Pathways from BioSystems
Gene Ontology

The following SMYD1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SMYD1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OEc14900	XM_004707945.1 Latest version!	Echinops telfairi SET and MYND domain containing 1 (SMYD1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OEc40737	XM_030888478.1 Latest version!	Echinops telfairi SET and MYND domain containing 1 (SMYD1), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

SMYD1 ( XM_004707945.1 ) cDNA ORF clone, Echinops telfairi(small Madagascar hedgehog) -> XP_004708002.1 Echinops telfairi SET and MYND domain containing 1 (SMYD1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OEc14900
Clone ID Related Accession (Same CDS sequence)	XM_004707945.1
Accession Version	XM_004707945.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1470bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-09-18
Organism	Echinops telfairi(small Madagascar hedgehog)
Product	histone-lysine N-methyltransferase SMYD1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_022111368.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Echinops telfairi Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACAATAG GGGCCATGGA GAACGTGGAC GTCTTCACCT CCGAGGGCAA AGGCAGGGGT 
CTGAAGGCCA CTAAGGAGCT CTGGGCAGCG GATGTCATCT TTGCGGAGCG GGCTTACTCT 
GCCGTGGTCT TCGACAGCCT CGTGAATGTC GTGTGCCACA CCTGCTTCAA GAGGCAGGAG 
AAGCTCCATC GCTGTGGGCA GTGCAAGTTT GCCCACTACT GTGACCGTAC CTGCCAGAAG 
GATGCCTGGC TGAACCACAA GAATGAGTGC TCAGCCCTCA AGAGATACGG GAAGGTGCCC 
AATGAGAACA TCAGGCTGGC TGCCCGGATC ATGTGGCGGG TGGAGAGAGA GGGCACCGGG 
CTCACGGAGG GCTGCCTGGT CTCTGTGGAC GACTTGCAGA ACCACGTGGA GCATTTTGGG 
GAGGAGGAGC AGAAGGCCCT GCGGGTGGAC GTGGACACCT TCTTGGAGTA TTGGCCGCCT 
CAGAGCCAGC AGTTCAGCAT GCAGTACATC TCGCACATCT TCGGAGTGAT CAATTGCAAC 
GGCTTCACTC TCAGCGATCA GAGAGGCCTG CAGGCAGTGG GGGTGGGCAT CTTCCCTAAC 
CTGGGTTTGG TGAACCATGA CTGTTGGCCC AACTGTACCG TCATCTTTAA CAATGGCAAT 
CATGAGGCAG TGAAATCCAT GTTTCACACC CAGATGAGAA TTGAGCTCCG GGCCCTGGGA 
AAGATCTCGG AAGGAGAGGA GTTGACGGTG TCCTATATCG ACTTCCTCAA TGTCAGCGAG 
GAACGCAAGA AGCAGCTGAA GAAGCAGTAC TACTTTGACT GCACGTGTGA GCACTGCCAG 
AAGGGGCTGA AAGATGATCT CTTCCTGGGC GTGAAAGACG ACCCAAAGCC TTCTCAGGAA 
GTGGTGAAGG AGATGATCCA GTTCTCCAAG GAGACCATGG ACAACATTGA CAAAGCTCGC 
TCAGAGGGTT TGTACCATGA GGTGGTGAAG TTATGCCGGG AGTGCCTGCA GAAGCAGGAG 
GCGGTGTTCG CAGACACCAA CCTCTACACG CTGCGCCTGC TGAGCATTGT GTCTGAGGTC 
CTGTCTTACC TCCAGGCCTT TGAAGAGGCT GCTGACTATG CCCGGAGGAT GGTCGATGGC 
TATATGAAGC TCTACCACCC CAACAATGCT CAGCTGGGCA TGGCCGTGAT GCGGGCAGGG 
CTGACCAACT GGCATGCTGG GAACATCGAG GTGGGGCATG GGATGATATG CAAAGCCTAT 
GCCATTCTCT TGGTGACCCA CGGGCCTTCC CACCCAATCA CGAAGGACTT AGAGGCCATG 
CGGGTGCAGA CTGAGATGGA GCTGCGCATG TTCCGCCAGA ATGAGTTCAT GTACCACAAG 
ATGCGCGAGG CTGCCCTGAC CAACCAGCCC ATGCAGGTCA TGGCTGAGCC CAGCAAAGAG 
CCGGCCCCAG CCCTGTTCCA TAAGAAATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_004708002.1
CDS	75..1544
Translation	MTIGAMENVDVFTSEGKGRGLKATKELWAADVIFAERAYSAVVFDSLVNVVCHTCFKRQEKLHRCGQCKFAHYCDRTCQKDAWLNHKNECSALKRYGKVPNENIRLAARIMWRVEREGTGLTEGCLVSVDDLQNHVEHFGEEEQKALRVDVDTFLEYWPPQSQQFSMQYISHIFGVINCNGFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFLNVSEERKKQLKKQYYFDCTCEHCQKGLKDDLFLGVKDDPKPSQEVVKEMIQFSKETMDNIDKARSEGLYHEVVKLCRECLQKQEAVFADTNLYTLRLLSIVSEVLSYLQAFEEAADYARRMVDGYMKLYHPNNAQLGMAVMRAGLTNWHAGNIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRVQTEMELRMFRQNEFMYHKMREAALTNQPMQVMAEPSKEPAPALFHKK

Target ORF information:

RefSeq Version	XM_004707945.1
Organism	Echinops telfairi(small Madagascar hedgehog)
Definition	Echinops telfairi SET and MYND domain containing 1 (SMYD1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_004707945.1

ORF Insert Sequence:

ATGACAATAG GGGCCATGGA GAACGTGGAC GTCTTCACCT CCGAGGGCAA AGGCAGGGGT 
CTGAAGGCCA CTAAGGAGCT CTGGGCAGCG GATGTCATCT TTGCGGAGCG GGCTTACTCT 
GCCGTGGTCT TCGACAGCCT CGTGAATGTC GTGTGCCACA CCTGCTTCAA GAGGCAGGAG 
AAGCTCCATC GCTGTGGGCA GTGCAAGTTT GCCCACTACT GTGACCGTAC CTGCCAGAAG 
GATGCCTGGC TGAACCACAA GAATGAGTGC TCAGCCCTCA AGAGATACGG GAAGGTGCCC 
AATGAGAACA TCAGGCTGGC TGCCCGGATC ATGTGGCGGG TGGAGAGAGA GGGCACCGGG 
CTCACGGAGG GCTGCCTGGT CTCTGTGGAC GACTTGCAGA ACCACGTGGA GCATTTTGGG 
GAGGAGGAGC AGAAGGCCCT GCGGGTGGAC GTGGACACCT TCTTGGAGTA TTGGCCGCCT 
CAGAGCCAGC AGTTCAGCAT GCAGTACATC TCGCACATCT TCGGAGTGAT CAATTGCAAC 
GGCTTCACTC TCAGCGATCA GAGAGGCCTG CAGGCAGTGG GGGTGGGCAT CTTCCCTAAC 
CTGGGTTTGG TGAACCATGA CTGTTGGCCC AACTGTACCG TCATCTTTAA CAATGGCAAT 
CATGAGGCAG TGAAATCCAT GTTTCACACC CAGATGAGAA TTGAGCTCCG GGCCCTGGGA 
AAGATCTCGG AAGGAGAGGA GTTGACGGTG TCCTATATCG ACTTCCTCAA TGTCAGCGAG 
GAACGCAAGA AGCAGCTGAA GAAGCAGTAC TACTTTGACT GCACGTGTGA GCACTGCCAG 
AAGGGGCTGA AAGATGATCT CTTCCTGGGC GTGAAAGACG ACCCAAAGCC TTCTCAGGAA 
GTGGTGAAGG AGATGATCCA GTTCTCCAAG GAGACCATGG ACAACATTGA CAAAGCTCGC 
TCAGAGGGTT TGTACCATGA GGTGGTGAAG TTATGCCGGG AGTGCCTGCA GAAGCAGGAG 
GCGGTGTTCG CAGACACCAA CCTCTACACG CTGCGCCTGC TGAGCATTGT GTCTGAGGTC 
CTGTCTTACC TCCAGGCCTT TGAAGAGGCT GCTGACTATG CCCGGAGGAT GGTCGATGGC 
TATATGAAGC TCTACCACCC CAACAATGCT CAGCTGGGCA TGGCCGTGAT GCGGGCAGGG 
CTGACCAACT GGCATGCTGG GAACATCGAG GTGGGGCATG GGATGATATG CAAAGCCTAT 
GCCATTCTCT TGGTGACCCA CGGGCCTTCC CACCCAATCA CGAAGGACTT AGAGGCCATG 
CGGGTGCAGA CTGAGATGGA GCTGCGCATG TTCCGCCAGA ATGAGTTCAT GTACCACAAG 
ATGCGCGAGG CTGCCCTGAC CAACCAGCCC ATGCAGGTCA TGGCTGAGCC CAGCAAAGAG 
CCGGCCCCAG CCCTGTTCCA TAAGAAATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

SMYD1 ( XM_030888478.1 ) cDNA ORF clone, Echinops telfairi(small Madagascar hedgehog) -> XP_030744338.1 Echinops telfairi SET and MYND domain containing 1 (SMYD1), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OEc40737
Clone ID Related Accession (Same CDS sequence)	XM_030888478.1
Accession Version	XM_030888478.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1431bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-09-18
Organism	Echinops telfairi(small Madagascar hedgehog)
Product	histone-lysine N-methyltransferase SMYD1 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_022111368.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Echinops telfairi Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACAATAG GGGCCATGGA GAACGTGGAC GTCTTCACCT CCGAGGGCAA AGGCAGGGGT 
CTGAAGGCCA CTAAGGAGCT CTGGGCAGCG GATGTCATCT TTGCGGAGCG GGCTTACTCT 
GCCGTGGTCT TCGACAGCCT CGTGAATGTC GTGTGCCACA CCTGCTTCAA GAGGCAGGAG 
AAGCTCCATC GCTGTGGGCA GTGCAAGTTT GCCCACTACT GTGACCGTAC CTGCCAGAAG 
GATGCCTGGC TGAACCACAA GAATGAGTGC TCAGCCCTCA AGAGATACGG GAAGGTGCCC 
AATGAGAACA TCAGGCTGGC TGCCCGGATC ATGTGGCGGG TGGAGAGAGA GGGCACCGGG 
CTCACGGAGG GCTGCCTGGT CTCTGTGGAC GACTTGCAGA ACCACGTGGA GCATTTTGGG 
GAGGAGGAGC AGAAGGCCCT GCGGGTGGAC GTGGACACCT TCTTGGAGTA TTGGCCGCCT 
CAGAGCCAGC AGTTCAGCAT GCAGTACATC TCGCACATCT TCGGAGTGAT CAATTGCAAC 
GGCTTCACTC TCAGCGATCA GAGAGGCCTG CAGGCAGTGG GGGTGGGCAT CTTCCCTAAC 
CTGGGTTTGG TGAACCATGA CTGTTGGCCC AACTGTACCG TCATCTTTAA CAATGGCAAA 
ATTGAGCTCC GGGCCCTGGG AAAGATCTCG GAAGGAGAGG AGTTGACGGT GTCCTATATC 
GACTTCCTCA ATGTCAGCGA GGAACGCAAG AAGCAGCTGA AGAAGCAGTA CTACTTTGAC 
TGCACGTGTG AGCACTGCCA GAAGGGGCTG AAAGATGATC TCTTCCTGGG CGTGAAAGAC 
GACCCAAAGC CTTCTCAGGA AGTGGTGAAG GAGATGATCC AGTTCTCCAA GGAGACCATG 
GACAACATTG ACAAAGCTCG CTCAGAGGGT TTGTACCATG AGGTGGTGAA GTTATGCCGG 
GAGTGCCTGC AGAAGCAGGA GGCGGTGTTC GCAGACACCA ACCTCTACAC GCTGCGCCTG 
CTGAGCATTG TGTCTGAGGT CCTGTCTTAC CTCCAGGCCT TTGAAGAGGC TGCTGACTAT 
GCCCGGAGGA TGGTCGATGG CTATATGAAG CTCTACCACC CCAACAATGC TCAGCTGGGC 
ATGGCCGTGA TGCGGGCAGG GCTGACCAAC TGGCATGCTG GGAACATCGA GGTGGGGCAT 
GGGATGATAT GCAAAGCCTA TGCCATTCTC TTGGTGACCC ACGGGCCTTC CCACCCAATC 
ACGAAGGACT TAGAGGCCAT GCGGGTGCAG ACTGAGATGG AGCTGCGCAT GTTCCGCCAG 
AATGAGTTCA TGTACCACAA GATGCGCGAG GCTGCCCTGA CCAACCAGCC CATGCAGGTC 
ATGGCTGAGC CCAGCAAAGA GCCGGCCCCA GCCCTGTTCC ATAAGAAATA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_030744338.1
CDS	1..1431
Translation	MTIGAMENVDVFTSEGKGRGLKATKELWAADVIFAERAYSAVVFDSLVNVVCHTCFKRQEKLHRCGQCKFAHYCDRTCQKDAWLNHKNECSALKRYGKVPNENIRLAARIMWRVEREGTGLTEGCLVSVDDLQNHVEHFGEEEQKALRVDVDTFLEYWPPQSQQFSMQYISHIFGVINCNGFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGKIELRALGKISEGEELTVSYIDFLNVSEERKKQLKKQYYFDCTCEHCQKGLKDDLFLGVKDDPKPSQEVVKEMIQFSKETMDNIDKARSEGLYHEVVKLCRECLQKQEAVFADTNLYTLRLLSIVSEVLSYLQAFEEAADYARRMVDGYMKLYHPNNAQLGMAVMRAGLTNWHAGNIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRVQTEMELRMFRQNEFMYHKMREAALTNQPMQVMAEPSKEPAPALFHKK

Target ORF information:

RefSeq Version	XM_030888478.1
Organism	Echinops telfairi(small Madagascar hedgehog)
Definition	Echinops telfairi SET and MYND domain containing 1 (SMYD1), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_030888478.1

ORF Insert Sequence:

ATGACAATAG GGGCCATGGA GAACGTGGAC GTCTTCACCT CCGAGGGCAA AGGCAGGGGT 
CTGAAGGCCA CTAAGGAGCT CTGGGCAGCG GATGTCATCT TTGCGGAGCG GGCTTACTCT 
GCCGTGGTCT TCGACAGCCT CGTGAATGTC GTGTGCCACA CCTGCTTCAA GAGGCAGGAG 
AAGCTCCATC GCTGTGGGCA GTGCAAGTTT GCCCACTACT GTGACCGTAC CTGCCAGAAG 
GATGCCTGGC TGAACCACAA GAATGAGTGC TCAGCCCTCA AGAGATACGG GAAGGTGCCC 
AATGAGAACA TCAGGCTGGC TGCCCGGATC ATGTGGCGGG TGGAGAGAGA GGGCACCGGG 
CTCACGGAGG GCTGCCTGGT CTCTGTGGAC GACTTGCAGA ACCACGTGGA GCATTTTGGG 
GAGGAGGAGC AGAAGGCCCT GCGGGTGGAC GTGGACACCT TCTTGGAGTA TTGGCCGCCT 
CAGAGCCAGC AGTTCAGCAT GCAGTACATC TCGCACATCT TCGGAGTGAT CAATTGCAAC 
GGCTTCACTC TCAGCGATCA GAGAGGCCTG CAGGCAGTGG GGGTGGGCAT CTTCCCTAAC 
CTGGGTTTGG TGAACCATGA CTGTTGGCCC AACTGTACCG TCATCTTTAA CAATGGCAAA 
ATTGAGCTCC GGGCCCTGGG AAAGATCTCG GAAGGAGAGG AGTTGACGGT GTCCTATATC 
GACTTCCTCA ATGTCAGCGA GGAACGCAAG AAGCAGCTGA AGAAGCAGTA CTACTTTGAC 
TGCACGTGTG AGCACTGCCA GAAGGGGCTG AAAGATGATC TCTTCCTGGG CGTGAAAGAC 
GACCCAAAGC CTTCTCAGGA AGTGGTGAAG GAGATGATCC AGTTCTCCAA GGAGACCATG 
GACAACATTG ACAAAGCTCG CTCAGAGGGT TTGTACCATG AGGTGGTGAA GTTATGCCGG 
GAGTGCCTGC AGAAGCAGGA GGCGGTGTTC GCAGACACCA ACCTCTACAC GCTGCGCCTG 
CTGAGCATTG TGTCTGAGGT CCTGTCTTAC CTCCAGGCCT TTGAAGAGGC TGCTGACTAT 
GCCCGGAGGA TGGTCGATGG CTATATGAAG CTCTACCACC CCAACAATGC TCAGCTGGGC 
ATGGCCGTGA TGCGGGCAGG GCTGACCAAC TGGCATGCTG GGAACATCGA GGTGGGGCAT 
GGGATGATAT GCAAAGCCTA TGCCATTCTC TTGGTGACCC ACGGGCCTTC CCACCCAATC 
ACGAAGGACT TAGAGGCCAT GCGGGTGCAG ACTGAGATGG AGCTGCGCAT GTTCCGCCAG 
AATGAGTTCA TGTACCACAA GATGCGCGAG GCTGCCCTGA CCAACCAGCC CATGCAGGTC 
ATGGCTGAGC CCAGCAAAGA GCCGGCCCCA GCCCTGTTCC ATAAGAAATA G