Sec13 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	Sec13
Entrez Gene ID	44437
Full Name	Secretory 13
Synonyms	BEST:CK00043,BcDNA:LD03471,CG6773,CK00043,Dmel\CG6773,Dsec13,SEC13,l(3)01031,sec13
General protein information	Preferred Names Secretory 13 Names CG6773 gene product from transcript CG6773-RB CG6773-PA CG6773-PB Sec13 ortholog Sec13-PA Sec13-PB sec13 secretory 13
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3R Map Location: 94E13-94E13

mRNA and Protein(s)

mRNA	Protein	Name
NM_143720.4	NP_651977.1	secretory 13, isoform A
NM_001300551.1	NP_001287480.1	secretory 13, isoform B

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	SEC13	XP_516277.3
Bos taurus (cattle)	SEC13	NP_001069033.1
Rattus norvegicus (Norway rat)	Sec13	NP_001006979.1
Danio rerio (zebrafish)	sec13	NP_998500.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP003183	XP_312881.4
Caenorhabditis elegans (roundworm)	npp-20	NP_500086.1
Eremothecium gossypii	AGOS_ACR199C	NP_983601.1
Arabidopsis thaliana (thale cress)	AT3G01340	NP_186783.1
Mus musculus (house mouse)	Sec13	NP_077168.2
Gallus gallus (chicken)	SEC13	NP_001264770.1
Drosophila melanogaster (fruit fly)	sec13	NP_651977.1
Arabidopsis thaliana (thale cress)	AT2G30050	NP_180566.1
Xenopus tropicalis (tropical clawed frog)	sec13	NP_988967.1
Homo sapiens (human)	SEC13	NP_001129498.1
	SEC13	XP_001089862.2
Saccharomyces cerevisiae (baker's yeast)	SEC13	NP_013309.1
Kluyveromyces lactis	KLLA0C16643g	XP_452944.1
Schizosaccharomyces pombe (fission yeast)	sec13	NP_596692.1
Magnaporthe oryzae (rice blast fungus)	MGG_14666	XP_003718375.1
Neurospora crassa	NCU04063	XP_957678.2
Oryza sativa (rice)	Os02g0135800	NP_001045820.1
Canis lupus familiaris (dog)	SEC13	XP_850437.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Nup88 localizes to silent loci, Sec13, Nup98, and a subset of FG-repeat nucleoporins bind to developmentally regulated genes undergoing transcription induction.
Title: Chromatin-bound nuclear pore components regulate gene expression in higher eukaryotes.

The following Sec13 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Sec13 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa06846	NM_001300551.1 Latest version!	Drosophila melanogaster secretory 13, transcript variant B (Sec13), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
OFa06846	NM_143720.4 Latest version!	Drosophila melanogaster secretory 13, transcript variant A (Sec13), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Sec13 ( NM_143720.4 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_651977.1 Drosophila melanogaster secretory 13, transcript variant A (Sec13), mRNA.

Price & Availability↑

CloneID	OFa06846
Clone ID Related Accession (Same CDS sequence)	NM_143720.4 , NM_001300551.1
Accession Version	NM_143720.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1071bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	secretory 13, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jan 16, 2013 this sequence version replaced NM_143720.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGTGAGCC TGCTGCAAGA GATCGACACC GAGCACGAGG ACATGGTCCA CCACGCAGCG 
CTGGACTTCT ACGGCCTACT GTTGGCCACC TGCTCCTCGG ACGGCAGCGT CCGCATCTTT 
CACTCGCGCA AAAACAATAA GGCGCTCGCC GAGCTCAAGG GACACCAGGG ACCAGTGTGG 
CAGGTGGCCT GGGCACATCC CAAGTTTGGC AACATACTGG CATCGTGCTC CTACGACCGC 
AAGGTGATCG TCTGGAAGTC CACAACGCCC CGGGATTGGA CTAAGCTCTA CGAATACAGC 
AACCACGACT CCTCGGTAAA CTCGGTGGAC TTCGCGCCAT CCGAGTACGG ATTGGTGTTG 
GCCTGCGCCA GTTCGGATGG CTCGGTATCG GTGCTCACCT GCAACACGGA GTACGGTGTG 
TGGGATGCCA AGAAGATACC GAATGCGCAC ACGATCGGAG TGAATGCCAT CTCGTGGTGC 
CCCGCCCAGG CACCAGATCC AGCATTTGAC CAGCGCGTAA CTTCGCGTTC GGCGGCCGTA 
AAGCGCCTAG TGAGCGGTGG TTGCGATAAT TTAGTGAAGA TTTGGCGGGA GGACAACGAC 
CGCTGGGTGG AGGAGCACCG ACTGGAGGCG CACTCGGATT GGGTGCGCGA CGTGGCCTGG 
GCGCCGTCGA TCGGATTGCC CCGCTCGCAG ATTGCCACGG CTTCGCAGGA TCGCCATGTG 
ATTGTGTGGA GCAGCAACGC AGATCTATCC GAGTGGACCT CGACTGTGCT GCACACATTC 
GACGATGCCG TGTGGAGCAT CTCGTGGTCA ACCACCGGCA ACATTCTTGC CGTCACCGGT 
GGGGACAACA ATGTCACATT GTGGAAGGAG AACACGGAGG GCCAATGGAT CCGCATCAAC 
TACGAGTCGG GTACGGCCAT CCAGTCGAAG CAGCCCTCGC ACCTTCCGCA TTCCCACTCC 
CAGCAGCAGC AGGCGCTACA ACAGCACCAA CAACAGGCGC CATCGCATCC AGGTCCTTCC 
TCCGATTCGG AGCATAGCTC GAACCTGTCC AACTCGCAGC TCTCCAACTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_651977.1
CDS	104..1174
Translation	MVSLLQEIDTEHEDMVHHAALDFYGLLLATCSSDGSVRIFHSRKNNKALAELKGHQGPVWQVAWAHPKFGNILASCSYDRKVIVWKSTTPRDWTKLYEYSNHDSSVNSVDFAPSEYGLVLACASSDGSVSVLTCNTEYGVWDAKKIPNAHTIGVNAISWCPAQAPDPAFDQRVTSRSAAVKRLVSGGCDNLVKIWREDNDRWVEEHRLEAHSDWVRDVAWAPSIGLPRSQIATASQDRHVIVWSSNADLSEWTSTVLHTFDDAVWSISWSTTGNILAVTGGDNNVTLWKENTEGQWIRINYESGTAIQSKQPSHLPHSHSQQQQALQQHQQQAPSHPGPSSDSEHSSNLSNSQLSN

Target ORF information:

RefSeq Version	NM_143720.4
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster secretory 13, transcript variant A (Sec13), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_143720.4

ORF Insert Sequence:

ATGGTGAGCC TGCTGCAAGA GATCGACACC GAGCACGAGG ACATGGTCCA CCACGCAGCG 
CTGGACTTCT ACGGCCTACT GTTGGCCACC TGCTCCTCGG ACGGCAGCGT CCGCATCTTT 
CACTCGCGCA AAAACAATAA GGCGCTCGCC GAGCTCAAGG GACACCAGGG ACCAGTGTGG 
CAGGTGGCCT GGGCACATCC CAAGTTTGGC AACATACTGG CATCGTGCTC CTACGACCGC 
AAGGTGATCG TCTGGAAGTC CACAACGCCC CGGGATTGGA CTAAGCTCTA CGAATACAGC 
AACCACGACT CCTCGGTAAA CTCGGTGGAC TTCGCGCCAT CCGAGTACGG ATTGGTGTTG 
GCCTGCGCCA GTTCGGATGG CTCGGTATCG GTGCTCACCT GCAACACGGA GTACGGTGTG 
TGGGATGCCA AGAAGATACC GAATGCGCAC ACGATCGGAG TGAATGCCAT CTCGTGGTGC 
CCCGCCCAGG CACCAGATCC AGCATTTGAC CAGCGCGTAA CTTCGCGTTC GGCGGCCGTA 
AAGCGCCTAG TGAGCGGTGG TTGCGATAAT TTAGTGAAGA TTTGGCGGGA GGACAACGAC 
CGCTGGGTGG AGGAGCACCG ACTGGAGGCG CACTCGGATT GGGTGCGCGA CGTGGCCTGG 
GCGCCGTCGA TCGGATTGCC CCGCTCGCAG ATTGCCACGG CTTCGCAGGA TCGCCATGTG 
ATTGTGTGGA GCAGCAACGC AGATCTATCC GAGTGGACCT CGACTGTGCT GCACACATTC 
GACGATGCCG TGTGGAGCAT CTCGTGGTCA ACCACCGGCA ACATTCTTGC CGTCACCGGT 
GGGGACAACA ATGTCACATT GTGGAAGGAG AACACGGAGG GCCAATGGAT CCGCATCAAC 
TACGAGTCGG GTACGGCCAT CCAGTCGAAG CAGCCCTCGC ACCTTCCGCA TTCCCACTCC 
CAGCAGCAGC AGGCGCTACA ACAGCACCAA CAACAGGCGC CATCGCATCC AGGTCCTTCC 
TCCGATTCGG AGCATAGCTC GAACCTGTCC AACTCGCAGC TCTCCAACTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Sec13 ( NM_001300551.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001287480.1 Drosophila melanogaster secretory 13, transcript variant B (Sec13), mRNA.

Price & Availability↑

CloneID	OFa06846
Clone ID Related Accession (Same CDS sequence)	NM_143720.4 , NM_001300551.1
Accession Version	NM_001300551.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1071bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	secretory 13, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGTGAGCC TGCTGCAAGA GATCGACACC GAGCACGAGG ACATGGTCCA CCACGCAGCG 
CTGGACTTCT ACGGCCTACT GTTGGCCACC TGCTCCTCGG ACGGCAGCGT CCGCATCTTT 
CACTCGCGCA AAAACAATAA GGCGCTCGCC GAGCTCAAGG GACACCAGGG ACCAGTGTGG 
CAGGTGGCCT GGGCACATCC CAAGTTTGGC AACATACTGG CATCGTGCTC CTACGACCGC 
AAGGTGATCG TCTGGAAGTC CACAACGCCC CGGGATTGGA CTAAGCTCTA CGAATACAGC 
AACCACGACT CCTCGGTAAA CTCGGTGGAC TTCGCGCCAT CCGAGTACGG ATTGGTGTTG 
GCCTGCGCCA GTTCGGATGG CTCGGTATCG GTGCTCACCT GCAACACGGA GTACGGTGTG 
TGGGATGCCA AGAAGATACC GAATGCGCAC ACGATCGGAG TGAATGCCAT CTCGTGGTGC 
CCCGCCCAGG CACCAGATCC AGCATTTGAC CAGCGCGTAA CTTCGCGTTC GGCGGCCGTA 
AAGCGCCTAG TGAGCGGTGG TTGCGATAAT TTAGTGAAGA TTTGGCGGGA GGACAACGAC 
CGCTGGGTGG AGGAGCACCG ACTGGAGGCG CACTCGGATT GGGTGCGCGA CGTGGCCTGG 
GCGCCGTCGA TCGGATTGCC CCGCTCGCAG ATTGCCACGG CTTCGCAGGA TCGCCATGTG 
ATTGTGTGGA GCAGCAACGC AGATCTATCC GAGTGGACCT CGACTGTGCT GCACACATTC 
GACGATGCCG TGTGGAGCAT CTCGTGGTCA ACCACCGGCA ACATTCTTGC CGTCACCGGT 
GGGGACAACA ATGTCACATT GTGGAAGGAG AACACGGAGG GCCAATGGAT CCGCATCAAC 
TACGAGTCGG GTACGGCCAT CCAGTCGAAG CAGCCCTCGC ACCTTCCGCA TTCCCACTCC 
CAGCAGCAGC AGGCGCTACA ACAGCACCAA CAACAGGCGC CATCGCATCC AGGTCCTTCC 
TCCGATTCGG AGCATAGCTC GAACCTGTCC AACTCGCAGC TCTCCAACTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001287480.1
CDS	389..1459
Translation	MVSLLQEIDTEHEDMVHHAALDFYGLLLATCSSDGSVRIFHSRKNNKALAELKGHQGPVWQVAWAHPKFGNILASCSYDRKVIVWKSTTPRDWTKLYEYSNHDSSVNSVDFAPSEYGLVLACASSDGSVSVLTCNTEYGVWDAKKIPNAHTIGVNAISWCPAQAPDPAFDQRVTSRSAAVKRLVSGGCDNLVKIWREDNDRWVEEHRLEAHSDWVRDVAWAPSIGLPRSQIATASQDRHVIVWSSNADLSEWTSTVLHTFDDAVWSISWSTTGNILAVTGGDNNVTLWKENTEGQWIRINYESGTAIQSKQPSHLPHSHSQQQQALQQHQQQAPSHPGPSSDSEHSSNLSNSQLSN

Target ORF information:

RefSeq Version	NM_001300551.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster secretory 13, transcript variant B (Sec13), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001300551.1

ORF Insert Sequence:

ATGGTGAGCC TGCTGCAAGA GATCGACACC GAGCACGAGG ACATGGTCCA CCACGCAGCG 
CTGGACTTCT ACGGCCTACT GTTGGCCACC TGCTCCTCGG ACGGCAGCGT CCGCATCTTT 
CACTCGCGCA AAAACAATAA GGCGCTCGCC GAGCTCAAGG GACACCAGGG ACCAGTGTGG 
CAGGTGGCCT GGGCACATCC CAAGTTTGGC AACATACTGG CATCGTGCTC CTACGACCGC 
AAGGTGATCG TCTGGAAGTC CACAACGCCC CGGGATTGGA CTAAGCTCTA CGAATACAGC 
AACCACGACT CCTCGGTAAA CTCGGTGGAC TTCGCGCCAT CCGAGTACGG ATTGGTGTTG 
GCCTGCGCCA GTTCGGATGG CTCGGTATCG GTGCTCACCT GCAACACGGA GTACGGTGTG 
TGGGATGCCA AGAAGATACC GAATGCGCAC ACGATCGGAG TGAATGCCAT CTCGTGGTGC 
CCCGCCCAGG CACCAGATCC AGCATTTGAC CAGCGCGTAA CTTCGCGTTC GGCGGCCGTA 
AAGCGCCTAG TGAGCGGTGG TTGCGATAAT TTAGTGAAGA TTTGGCGGGA GGACAACGAC 
CGCTGGGTGG AGGAGCACCG ACTGGAGGCG CACTCGGATT GGGTGCGCGA CGTGGCCTGG 
GCGCCGTCGA TCGGATTGCC CCGCTCGCAG ATTGCCACGG CTTCGCAGGA TCGCCATGTG 
ATTGTGTGGA GCAGCAACGC AGATCTATCC GAGTGGACCT CGACTGTGCT GCACACATTC 
GACGATGCCG TGTGGAGCAT CTCGTGGTCA ACCACCGGCA ACATTCTTGC CGTCACCGGT 
GGGGACAACA ATGTCACATT GTGGAAGGAG AACACGGAGG GCCAATGGAT CCGCATCAAC 
TACGAGTCGG GTACGGCCAT CCAGTCGAAG CAGCCCTCGC ACCTTCCGCA TTCCCACTCC 
CAGCAGCAGC AGGCGCTACA ACAGCACCAA CAACAGGCGC CATCGCATCC AGGTCCTTCC 
TCCGATTCGG AGCATAGCTC GAACCTGTCC AACTCGCAGC TCTCCAACTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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Sec13 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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