Ephrin cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	Ephrin
Entrez Gene ID	43799
Full Name	CG1862 gene product from transcript CG1862-RC
Synonyms	CG1862,Dmel\CG1862,ephrin,lincRNA.922
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 4 Map Location: 102C5-102C6

mRNA and Protein(s)

mRNA	Protein	Name
NM_143670.5	NP_651927.1	ephrin, isoform B
NM_166770.2	NP_726583.1	ephrin, isoform A
NM_166771.2	NP_726584.1	ephrin, isoform C

Pathways from BioSystems

Homologies

Drosophila melanogaster (fruit fly)	Ephrin	NP_651927.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP009426	XP_560403.3

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

DNrx promotes ephrin clustering and reveals that ephrin/Eph signaling from adjacent L4 neurons restricts axonal branches of L4 neurons in columns.
Title: Neurexin Restricts Axonal Branching in Columns by Promoting Ephrin Clustering.

a transmembrane ephrin with a unique structure prevents interneuronal axons from exiting the Drosophila embryonic CNS
Title: Dephrin, a transmembrane ephrin with a unique structure, prevents interneuronal axons from exiting the Drosophila embryonic CNS.

The following Ephrin gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ephrin cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OFa00273	NM_166771.2 Latest version!	Drosophila melanogaster ephrin, transcript variant C (Ephrin), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00
OFa00273	NM_143670.5 Latest version!	Drosophila melanogaster ephrin, transcript variant B (Ephrin), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00
OFa00273	NM_166770.2 Latest version!	Drosophila melanogaster ephrin, transcript variant A (Ephrin), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Ephrin ( NM_143670.5 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_651927.1 Drosophila melanogaster ephrin, transcript variant B (Ephrin), mRNA.

Price & Availability↑

CloneID	OFa00273
Clone ID Related Accession (Same CDS sequence)	NM_143670.5 , NM_166770.2 , NM_166771.2
Accession Version	NM_143670.5 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1959bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	ephrin, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004353). On Jan 16, 2013 this sequence version replaced NM_143670.4. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCAAGAAC GATCAAAGCA ACTGCGTCTT ACTGTTTCCT GGACCCAGTC AAAGTCTCAG 
ATTCATGACA GTTGTCAACG TCGGAGCATG TTGGCATGTA AGAGGCGCTT AACTACCAGT 
AAAGTGCTTG AAGACTCACA TCCACCAGTA GCTTTCCCCA ATTGCAAATC TCACCGGCAT 
CAGCAACAAA AGGAGAAACA TAAAGTTCAG CTATACTCTG GAAAACCTTT AAGCATTAAG 
CTGTACGTGC CAGGAAGTAT TGAGAGTATC CCAAAAATTC GACATAAGGC GCTTACGACA 
ACGAATAAAC AGCAACCAGC TATGCATCGA AAGTCTAAGA GCAAAAGCAA GTTTCAAGGT 
TTTAACAATC TCAAGCCGCT TTATTCACCG AGTAAAAGAC AACCACCCGA GAAGCATTCA 
TCAGTACTGG TGGAAGCAGG GATAGAATCA AAGGCATCAC GGCATTTTGT TGGTAAAAAG 
AGGATTAAGA ACAGAAACTG TTTGTTATCT TCGCCTCAGC CATCGCCAAT GAGATGCAAA 
ATGATGATTC CATTTCCAAA GTTTGGTGCC ACATCCTTTG TTACGTTGCT CACTTTAATT 
TGTATGGAAA CTGTTTTGCT CTCCACCATG TCTAGTTGCG CCAAGACTTT TTACATGCAT 
TGGAACACAT CGAACAGTAT ATTTCGGATT GATAACACAG ATCATATTAT CGATGTTAAT 
AAAGGCAATC TTGCATTTGA GTTCGATCAG GTTCATATAA TATGCCCAGT ATATGAGCCA 
GGGACTTTTG AGAACGAAAC TGAAAAATAC ATAATTTACA ATGTGTCTAA AGTGGAGTAT 
GAAACTTGTC GCATAACAAA TGCAGATCCG CGAGTAATAG CTATATGTGA TAAACCTCAG 
AAATTAATGT TTTTTACAAT AACTTTCCGG CCATTTACAC CGCAGCCAGG TGGCTTGGAG 
TTCCTACCTG GAAATGATTA TTACTTTATT TCAACTTCAT CTAAGGATGA TTTATATCGA 
AGAATTGGAG GTCGATGCTC TACAAATAAC ATGAAAGTCG TCTTTAAAGT GTGTTGTGCC 
CCAGAGGACA ACAACAAAAC CACGGCGCTA AGCAATTCTA AATCTGTTAC AGACACCGGA 
GGAGCCATTA ATGTCAATAT AGCGAATAAT GATGAAAGTC ATGTGAATAG CCACGGCAAT 
AACATAGCTA TTGGAACCAA CATTGGTATA AATGGAGGCC AAATTATAGG GGGACCGCAG 
TCGGCAGGAA TTCCAATTAA TCCACTAAGC GGGAATAACA ATATAAATGG CATACCAACT 
ACTATTAATT CAAACATTGA TCAGTTTAAT CGGATTCCAA TCCAGCCAAA CATAATCGGT 
AATCATGTAG GGACTAATGC CGTAGGAACC GGAATTGTTG GTGGTGGAGG AATAATATTA 
ACTCCTGGCC ATGCTCATGG CAACATTAAT ATGCTGCAAC CAGGGCGAGG TGGAATAAAC 
GGAGCATATC CCGGACATCA CCACATCCAA ACTGGGATAC GGATAAACAA TGTGCCTACG 
CAACACAACT ATCCGTCCCA TAAGGGTAAT GCTAACAGTA ATATTAACGG AAACGATGAC 
CACCATCATT ACAACAAACA TCCCAACGAG GTTGTAAAAA ATGAAGAGCT GACCTATAAT 
AGTGGTGCTG CGACATCGGA TGGTAACATC TTCGCTTTAT GGATCTGGAT TTTATCAATT 
TTCCCACTGC TATCTATTCA ATCTTGCCAT TTGTCTTCAT ATTGGATAAG CGCATCATTT 
TTAGTCAGCA CTATTGCAAT TCTTGGCATT CACTATCTTA TTCAAATCAC TTTGCAAACC 
ACGGTGCAGC GATATAGTCC TGGAATGGTT GAAATCACCG CGACCTCTAT GAACGGGATG 
TTTGACCAGA ATGCTGGCAC TATTGAATAT GACCGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_651927.1
CDS	246..2204
Translation	MQERSKQLRLTVSWTQSKSQIHDSCQRRSMLACKRRLTTSKVLEDSHPPVAFPNCKSHRHQQQKEKHKVQLYSGKPLSIKLYVPGSIESIPKIRHKALTTTNKQQPAMHRKSKSKSKFQGFNNLKPLYSPSKRQPPEKHSSVLVEAGIESKASRHFVGKKRIKNRNCLLSSPQPSPMRCKMMIPFPKFGATSFVTLLTLICMETVLLSTMSSCAKTFYMHWNTSNSIFRIDNTDHIIDVNKGNLAFEFDQVHIICPVYEPGTFENETEKYIIYNVSKVEYETCRITNADPRVIAICDKPQKLMFFTITFRPFTPQPGGLEFLPGNDYYFISTSSKDDLYRRIGGRCSTNNMKVVFKVCCAPEDNNKTTALSNSKSVTDTGGAINVNIANNDESHVNSHGNNIAIGTNIGINGGQIIGGPQSAGIPINPLSGNNNINGIPTTINSNIDQFNRIPIQPNIIGNHVGTNAVGTGIVGGGGIILTPGHAHGNINMLQPGRGGINGAYPGHHHIQTGIRINNVPTQHNYPSHKGNANSNINGNDDHHHYNKHPNEVVKNEELTYNSGAATSDGNIFALWIWILSIFPLLSIQSCHLSSYWISASFLVSTIAILGIHYLIQITLQTTVQRYSPGMVEITATSMNGMFDQNAGTIEYDR

Target ORF information:

RefSeq Version	NM_143670.5
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster ephrin, transcript variant B (Ephrin), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_143670.5

ORF Insert Sequence:

ATGCAAGAAC GATCAAAGCA ACTGCGTCTT ACTGTTTCCT GGACCCAGTC AAAGTCTCAG 
ATTCATGACA GTTGTCAACG TCGGAGCATG TTGGCATGTA AGAGGCGCTT AACTACCAGT 
AAAGTGCTTG AAGACTCACA TCCACCAGTA GCTTTCCCCA ATTGCAAATC TCACCGGCAT 
CAGCAACAAA AGGAGAAACA TAAAGTTCAG CTATACTCTG GAAAACCTTT AAGCATTAAG 
CTGTACGTGC CAGGAAGTAT TGAGAGTATC CCAAAAATTC GACATAAGGC GCTTACGACA 
ACGAATAAAC AGCAACCAGC TATGCATCGA AAGTCTAAGA GCAAAAGCAA GTTTCAAGGT 
TTTAACAATC TCAAGCCGCT TTATTCACCG AGTAAAAGAC AACCACCCGA GAAGCATTCA 
TCAGTACTGG TGGAAGCAGG GATAGAATCA AAGGCATCAC GGCATTTTGT TGGTAAAAAG 
AGGATTAAGA ACAGAAACTG TTTGTTATCT TCGCCTCAGC CATCGCCAAT GAGATGCAAA 
ATGATGATTC CATTTCCAAA GTTTGGTGCC ACATCCTTTG TTACGTTGCT CACTTTAATT 
TGTATGGAAA CTGTTTTGCT CTCCACCATG TCTAGTTGCG CCAAGACTTT TTACATGCAT 
TGGAACACAT CGAACAGTAT ATTTCGGATT GATAACACAG ATCATATTAT CGATGTTAAT 
AAAGGCAATC TTGCATTTGA GTTCGATCAG GTTCATATAA TATGCCCAGT ATATGAGCCA 
GGGACTTTTG AGAACGAAAC TGAAAAATAC ATAATTTACA ATGTGTCTAA AGTGGAGTAT 
GAAACTTGTC GCATAACAAA TGCAGATCCG CGAGTAATAG CTATATGTGA TAAACCTCAG 
AAATTAATGT TTTTTACAAT AACTTTCCGG CCATTTACAC CGCAGCCAGG TGGCTTGGAG 
TTCCTACCTG GAAATGATTA TTACTTTATT TCAACTTCAT CTAAGGATGA TTTATATCGA 
AGAATTGGAG GTCGATGCTC TACAAATAAC ATGAAAGTCG TCTTTAAAGT GTGTTGTGCC 
CCAGAGGACA ACAACAAAAC CACGGCGCTA AGCAATTCTA AATCTGTTAC AGACACCGGA 
GGAGCCATTA ATGTCAATAT AGCGAATAAT GATGAAAGTC ATGTGAATAG CCACGGCAAT 
AACATAGCTA TTGGAACCAA CATTGGTATA AATGGAGGCC AAATTATAGG GGGACCGCAG 
TCGGCAGGAA TTCCAATTAA TCCACTAAGC GGGAATAACA ATATAAATGG CATACCAACT 
ACTATTAATT CAAACATTGA TCAGTTTAAT CGGATTCCAA TCCAGCCAAA CATAATCGGT 
AATCATGTAG GGACTAATGC CGTAGGAACC GGAATTGTTG GTGGTGGAGG AATAATATTA 
ACTCCTGGCC ATGCTCATGG CAACATTAAT ATGCTGCAAC CAGGGCGAGG TGGAATAAAC 
GGAGCATATC CCGGACATCA CCACATCCAA ACTGGGATAC GGATAAACAA TGTGCCTACG 
CAACACAACT ATCCGTCCCA TAAGGGTAAT GCTAACAGTA ATATTAACGG AAACGATGAC 
CACCATCATT ACAACAAACA TCCCAACGAG GTTGTAAAAA ATGAAGAGCT GACCTATAAT 
AGTGGTGCTG CGACATCGGA TGGTAACATC TTCGCTTTAT GGATCTGGAT TTTATCAATT 
TTCCCACTGC TATCTATTCA ATCTTGCCAT TTGTCTTCAT ATTGGATAAG CGCATCATTT 
TTAGTCAGCA CTATTGCAAT TCTTGGCATT CACTATCTTA TTCAAATCAC TTTGCAAACC 
ACGGTGCAGC GATATAGTCC TGGAATGGTT GAAATCACCG CGACCTCTAT GAACGGGATG 
TTTGACCAGA ATGCTGGCAC TATTGAATAT GACCGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ephrin ( NM_166770.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_726583.1 Drosophila melanogaster ephrin, transcript variant A (Ephrin), mRNA.

Price & Availability↑

CloneID	OFa00273
Clone ID Related Accession (Same CDS sequence)	NM_143670.5 , NM_166770.2 , NM_166771.2
Accession Version	NM_166770.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1959bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	ephrin, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004353). On Jan 16, 2013 this sequence version replaced NM_166770.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCAAGAAC GATCAAAGCA ACTGCGTCTT ACTGTTTCCT GGACCCAGTC AAAGTCTCAG 
ATTCATGACA GTTGTCAACG TCGGAGCATG TTGGCATGTA AGAGGCGCTT AACTACCAGT 
AAAGTGCTTG AAGACTCACA TCCACCAGTA GCTTTCCCCA ATTGCAAATC TCACCGGCAT 
CAGCAACAAA AGGAGAAACA TAAAGTTCAG CTATACTCTG GAAAACCTTT AAGCATTAAG 
CTGTACGTGC CAGGAAGTAT TGAGAGTATC CCAAAAATTC GACATAAGGC GCTTACGACA 
ACGAATAAAC AGCAACCAGC TATGCATCGA AAGTCTAAGA GCAAAAGCAA GTTTCAAGGT 
TTTAACAATC TCAAGCCGCT TTATTCACCG AGTAAAAGAC AACCACCCGA GAAGCATTCA 
TCAGTACTGG TGGAAGCAGG GATAGAATCA AAGGCATCAC GGCATTTTGT TGGTAAAAAG 
AGGATTAAGA ACAGAAACTG TTTGTTATCT TCGCCTCAGC CATCGCCAAT GAGATGCAAA 
ATGATGATTC CATTTCCAAA GTTTGGTGCC ACATCCTTTG TTACGTTGCT CACTTTAATT 
TGTATGGAAA CTGTTTTGCT CTCCACCATG TCTAGTTGCG CCAAGACTTT TTACATGCAT 
TGGAACACAT CGAACAGTAT ATTTCGGATT GATAACACAG ATCATATTAT CGATGTTAAT 
AAAGGCAATC TTGCATTTGA GTTCGATCAG GTTCATATAA TATGCCCAGT ATATGAGCCA 
GGGACTTTTG AGAACGAAAC TGAAAAATAC ATAATTTACA ATGTGTCTAA AGTGGAGTAT 
GAAACTTGTC GCATAACAAA TGCAGATCCG CGAGTAATAG CTATATGTGA TAAACCTCAG 
AAATTAATGT TTTTTACAAT AACTTTCCGG CCATTTACAC CGCAGCCAGG TGGCTTGGAG 
TTCCTACCTG GAAATGATTA TTACTTTATT TCAACTTCAT CTAAGGATGA TTTATATCGA 
AGAATTGGAG GTCGATGCTC TACAAATAAC ATGAAAGTCG TCTTTAAAGT GTGTTGTGCC 
CCAGAGGACA ACAACAAAAC CACGGCGCTA AGCAATTCTA AATCTGTTAC AGACACCGGA 
GGAGCCATTA ATGTCAATAT AGCGAATAAT GATGAAAGTC ATGTGAATAG CCACGGCAAT 
AACATAGCTA TTGGAACCAA CATTGGTATA AATGGAGGCC AAATTATAGG GGGACCGCAG 
TCGGCAGGAA TTCCAATTAA TCCACTAAGC GGGAATAACA ATATAAATGG CATACCAACT 
ACTATTAATT CAAACATTGA TCAGTTTAAT CGGATTCCAA TCCAGCCAAA CATAATCGGT 
AATCATGTAG GGACTAATGC CGTAGGAACC GGAATTGTTG GTGGTGGAGG AATAATATTA 
ACTCCTGGCC ATGCTCATGG CAACATTAAT ATGCTGCAAC CAGGGCGAGG TGGAATAAAC 
GGAGCATATC CCGGACATCA CCACATCCAA ACTGGGATAC GGATAAACAA TGTGCCTACG 
CAACACAACT ATCCGTCCCA TAAGGGTAAT GCTAACAGTA ATATTAACGG AAACGATGAC 
CACCATCATT ACAACAAACA TCCCAACGAG GTTGTAAAAA ATGAAGAGCT GACCTATAAT 
AGTGGTGCTG CGACATCGGA TGGTAACATC TTCGCTTTAT GGATCTGGAT TTTATCAATT 
TTCCCACTGC TATCTATTCA ATCTTGCCAT TTGTCTTCAT ATTGGATAAG CGCATCATTT 
TTAGTCAGCA CTATTGCAAT TCTTGGCATT CACTATCTTA TTCAAATCAC TTTGCAAACC 
ACGGTGCAGC GATATAGTCC TGGAATGGTT GAAATCACCG CGACCTCTAT GAACGGGATG 
TTTGACCAGA ATGCTGGCAC TATTGAATAT GACCGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_726583.1
CDS	349..2307
Translation	MQERSKQLRLTVSWTQSKSQIHDSCQRRSMLACKRRLTTSKVLEDSHPPVAFPNCKSHRHQQQKEKHKVQLYSGKPLSIKLYVPGSIESIPKIRHKALTTTNKQQPAMHRKSKSKSKFQGFNNLKPLYSPSKRQPPEKHSSVLVEAGIESKASRHFVGKKRIKNRNCLLSSPQPSPMRCKMMIPFPKFGATSFVTLLTLICMETVLLSTMSSCAKTFYMHWNTSNSIFRIDNTDHIIDVNKGNLAFEFDQVHIICPVYEPGTFENETEKYIIYNVSKVEYETCRITNADPRVIAICDKPQKLMFFTITFRPFTPQPGGLEFLPGNDYYFISTSSKDDLYRRIGGRCSTNNMKVVFKVCCAPEDNNKTTALSNSKSVTDTGGAINVNIANNDESHVNSHGNNIAIGTNIGINGGQIIGGPQSAGIPINPLSGNNNINGIPTTINSNIDQFNRIPIQPNIIGNHVGTNAVGTGIVGGGGIILTPGHAHGNINMLQPGRGGINGAYPGHHHIQTGIRINNVPTQHNYPSHKGNANSNINGNDDHHHYNKHPNEVVKNEELTYNSGAATSDGNIFALWIWILSIFPLLSIQSCHLSSYWISASFLVSTIAILGIHYLIQITLQTTVQRYSPGMVEITATSMNGMFDQNAGTIEYDR

Target ORF information:

RefSeq Version	NM_166770.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster ephrin, transcript variant A (Ephrin), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_166770.2

ORF Insert Sequence:

ATGCAAGAAC GATCAAAGCA ACTGCGTCTT ACTGTTTCCT GGACCCAGTC AAAGTCTCAG 
ATTCATGACA GTTGTCAACG TCGGAGCATG TTGGCATGTA AGAGGCGCTT AACTACCAGT 
AAAGTGCTTG AAGACTCACA TCCACCAGTA GCTTTCCCCA ATTGCAAATC TCACCGGCAT 
CAGCAACAAA AGGAGAAACA TAAAGTTCAG CTATACTCTG GAAAACCTTT AAGCATTAAG 
CTGTACGTGC CAGGAAGTAT TGAGAGTATC CCAAAAATTC GACATAAGGC GCTTACGACA 
ACGAATAAAC AGCAACCAGC TATGCATCGA AAGTCTAAGA GCAAAAGCAA GTTTCAAGGT 
TTTAACAATC TCAAGCCGCT TTATTCACCG AGTAAAAGAC AACCACCCGA GAAGCATTCA 
TCAGTACTGG TGGAAGCAGG GATAGAATCA AAGGCATCAC GGCATTTTGT TGGTAAAAAG 
AGGATTAAGA ACAGAAACTG TTTGTTATCT TCGCCTCAGC CATCGCCAAT GAGATGCAAA 
ATGATGATTC CATTTCCAAA GTTTGGTGCC ACATCCTTTG TTACGTTGCT CACTTTAATT 
TGTATGGAAA CTGTTTTGCT CTCCACCATG TCTAGTTGCG CCAAGACTTT TTACATGCAT 
TGGAACACAT CGAACAGTAT ATTTCGGATT GATAACACAG ATCATATTAT CGATGTTAAT 
AAAGGCAATC TTGCATTTGA GTTCGATCAG GTTCATATAA TATGCCCAGT ATATGAGCCA 
GGGACTTTTG AGAACGAAAC TGAAAAATAC ATAATTTACA ATGTGTCTAA AGTGGAGTAT 
GAAACTTGTC GCATAACAAA TGCAGATCCG CGAGTAATAG CTATATGTGA TAAACCTCAG 
AAATTAATGT TTTTTACAAT AACTTTCCGG CCATTTACAC CGCAGCCAGG TGGCTTGGAG 
TTCCTACCTG GAAATGATTA TTACTTTATT TCAACTTCAT CTAAGGATGA TTTATATCGA 
AGAATTGGAG GTCGATGCTC TACAAATAAC ATGAAAGTCG TCTTTAAAGT GTGTTGTGCC 
CCAGAGGACA ACAACAAAAC CACGGCGCTA AGCAATTCTA AATCTGTTAC AGACACCGGA 
GGAGCCATTA ATGTCAATAT AGCGAATAAT GATGAAAGTC ATGTGAATAG CCACGGCAAT 
AACATAGCTA TTGGAACCAA CATTGGTATA AATGGAGGCC AAATTATAGG GGGACCGCAG 
TCGGCAGGAA TTCCAATTAA TCCACTAAGC GGGAATAACA ATATAAATGG CATACCAACT 
ACTATTAATT CAAACATTGA TCAGTTTAAT CGGATTCCAA TCCAGCCAAA CATAATCGGT 
AATCATGTAG GGACTAATGC CGTAGGAACC GGAATTGTTG GTGGTGGAGG AATAATATTA 
ACTCCTGGCC ATGCTCATGG CAACATTAAT ATGCTGCAAC CAGGGCGAGG TGGAATAAAC 
GGAGCATATC CCGGACATCA CCACATCCAA ACTGGGATAC GGATAAACAA TGTGCCTACG 
CAACACAACT ATCCGTCCCA TAAGGGTAAT GCTAACAGTA ATATTAACGG AAACGATGAC 
CACCATCATT ACAACAAACA TCCCAACGAG GTTGTAAAAA ATGAAGAGCT GACCTATAAT 
AGTGGTGCTG CGACATCGGA TGGTAACATC TTCGCTTTAT GGATCTGGAT TTTATCAATT 
TTCCCACTGC TATCTATTCA ATCTTGCCAT TTGTCTTCAT ATTGGATAAG CGCATCATTT 
TTAGTCAGCA CTATTGCAAT TCTTGGCATT CACTATCTTA TTCAAATCAC TTTGCAAACC 
ACGGTGCAGC GATATAGTCC TGGAATGGTT GAAATCACCG CGACCTCTAT GAACGGGATG 
TTTGACCAGA ATGCTGGCAC TATTGAATAT GACCGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ephrin ( NM_166771.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_726584.1 Drosophila melanogaster ephrin, transcript variant C (Ephrin), mRNA.

Price & Availability↑

CloneID	OFa00273
Clone ID Related Accession (Same CDS sequence)	NM_143670.5 , NM_166770.2 , NM_166771.2
Accession Version	NM_166771.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1959bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	ephrin, isoform C
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004353). On Jan 16, 2013 this sequence version replaced NM_166771.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCAAGAAC GATCAAAGCA ACTGCGTCTT ACTGTTTCCT GGACCCAGTC AAAGTCTCAG 
ATTCATGACA GTTGTCAACG TCGGAGCATG TTGGCATGTA AGAGGCGCTT AACTACCAGT 
AAAGTGCTTG AAGACTCACA TCCACCAGTA GCTTTCCCCA ATTGCAAATC TCACCGGCAT 
CAGCAACAAA AGGAGAAACA TAAAGTTCAG CTATACTCTG GAAAACCTTT AAGCATTAAG 
CTGTACGTGC CAGGAAGTAT TGAGAGTATC CCAAAAATTC GACATAAGGC GCTTACGACA 
ACGAATAAAC AGCAACCAGC TATGCATCGA AAGTCTAAGA GCAAAAGCAA GTTTCAAGGT 
TTTAACAATC TCAAGCCGCT TTATTCACCG AGTAAAAGAC AACCACCCGA GAAGCATTCA 
TCAGTACTGG TGGAAGCAGG GATAGAATCA AAGGCATCAC GGCATTTTGT TGGTAAAAAG 
AGGATTAAGA ACAGAAACTG TTTGTTATCT TCGCCTCAGC CATCGCCAAT GAGATGCAAA 
ATGATGATTC CATTTCCAAA GTTTGGTGCC ACATCCTTTG TTACGTTGCT CACTTTAATT 
TGTATGGAAA CTGTTTTGCT CTCCACCATG TCTAGTTGCG CCAAGACTTT TTACATGCAT 
TGGAACACAT CGAACAGTAT ATTTCGGATT GATAACACAG ATCATATTAT CGATGTTAAT 
AAAGGCAATC TTGCATTTGA GTTCGATCAG GTTCATATAA TATGCCCAGT ATATGAGCCA 
GGGACTTTTG AGAACGAAAC TGAAAAATAC ATAATTTACA ATGTGTCTAA AGTGGAGTAT 
GAAACTTGTC GCATAACAAA TGCAGATCCG CGAGTAATAG CTATATGTGA TAAACCTCAG 
AAATTAATGT TTTTTACAAT AACTTTCCGG CCATTTACAC CGCAGCCAGG TGGCTTGGAG 
TTCCTACCTG GAAATGATTA TTACTTTATT TCAACTTCAT CTAAGGATGA TTTATATCGA 
AGAATTGGAG GTCGATGCTC TACAAATAAC ATGAAAGTCG TCTTTAAAGT GTGTTGTGCC 
CCAGAGGACA ACAACAAAAC CACGGCGCTA AGCAATTCTA AATCTGTTAC AGACACCGGA 
GGAGCCATTA ATGTCAATAT AGCGAATAAT GATGAAAGTC ATGTGAATAG CCACGGCAAT 
AACATAGCTA TTGGAACCAA CATTGGTATA AATGGAGGCC AAATTATAGG GGGACCGCAG 
TCGGCAGGAA TTCCAATTAA TCCACTAAGC GGGAATAACA ATATAAATGG CATACCAACT 
ACTATTAATT CAAACATTGA TCAGTTTAAT CGGATTCCAA TCCAGCCAAA CATAATCGGT 
AATCATGTAG GGACTAATGC CGTAGGAACC GGAATTGTTG GTGGTGGAGG AATAATATTA 
ACTCCTGGCC ATGCTCATGG CAACATTAAT ATGCTGCAAC CAGGGCGAGG TGGAATAAAC 
GGAGCATATC CCGGACATCA CCACATCCAA ACTGGGATAC GGATAAACAA TGTGCCTACG 
CAACACAACT ATCCGTCCCA TAAGGGTAAT GCTAACAGTA ATATTAACGG AAACGATGAC 
CACCATCATT ACAACAAACA TCCCAACGAG GTTGTAAAAA ATGAAGAGCT GACCTATAAT 
AGTGGTGCTG CGACATCGGA TGGTAACATC TTCGCTTTAT GGATCTGGAT TTTATCAATT 
TTCCCACTGC TATCTATTCA ATCTTGCCAT TTGTCTTCAT ATTGGATAAG CGCATCATTT 
TTAGTCAGCA CTATTGCAAT TCTTGGCATT CACTATCTTA TTCAAATCAC TTTGCAAACC 
ACGGTGCAGC GATATAGTCC TGGAATGGTT GAAATCACCG CGACCTCTAT GAACGGGATG 
TTTGACCAGA ATGCTGGCAC TATTGAATAT GACCGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_726584.1
CDS	554..2512
Translation	MQERSKQLRLTVSWTQSKSQIHDSCQRRSMLACKRRLTTSKVLEDSHPPVAFPNCKSHRHQQQKEKHKVQLYSGKPLSIKLYVPGSIESIPKIRHKALTTTNKQQPAMHRKSKSKSKFQGFNNLKPLYSPSKRQPPEKHSSVLVEAGIESKASRHFVGKKRIKNRNCLLSSPQPSPMRCKMMIPFPKFGATSFVTLLTLICMETVLLSTMSSCAKTFYMHWNTSNSIFRIDNTDHIIDVNKGNLAFEFDQVHIICPVYEPGTFENETEKYIIYNVSKVEYETCRITNADPRVIAICDKPQKLMFFTITFRPFTPQPGGLEFLPGNDYYFISTSSKDDLYRRIGGRCSTNNMKVVFKVCCAPEDNNKTTALSNSKSVTDTGGAINVNIANNDESHVNSHGNNIAIGTNIGINGGQIIGGPQSAGIPINPLSGNNNINGIPTTINSNIDQFNRIPIQPNIIGNHVGTNAVGTGIVGGGGIILTPGHAHGNINMLQPGRGGINGAYPGHHHIQTGIRINNVPTQHNYPSHKGNANSNINGNDDHHHYNKHPNEVVKNEELTYNSGAATSDGNIFALWIWILSIFPLLSIQSCHLSSYWISASFLVSTIAILGIHYLIQITLQTTVQRYSPGMVEITATSMNGMFDQNAGTIEYDR

Target ORF information:

RefSeq Version	NM_166771.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster ephrin, transcript variant C (Ephrin), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_166771.2

ORF Insert Sequence:

ATGCAAGAAC GATCAAAGCA ACTGCGTCTT ACTGTTTCCT GGACCCAGTC AAAGTCTCAG 
ATTCATGACA GTTGTCAACG TCGGAGCATG TTGGCATGTA AGAGGCGCTT AACTACCAGT 
AAAGTGCTTG AAGACTCACA TCCACCAGTA GCTTTCCCCA ATTGCAAATC TCACCGGCAT 
CAGCAACAAA AGGAGAAACA TAAAGTTCAG CTATACTCTG GAAAACCTTT AAGCATTAAG 
CTGTACGTGC CAGGAAGTAT TGAGAGTATC CCAAAAATTC GACATAAGGC GCTTACGACA 
ACGAATAAAC AGCAACCAGC TATGCATCGA AAGTCTAAGA GCAAAAGCAA GTTTCAAGGT 
TTTAACAATC TCAAGCCGCT TTATTCACCG AGTAAAAGAC AACCACCCGA GAAGCATTCA 
TCAGTACTGG TGGAAGCAGG GATAGAATCA AAGGCATCAC GGCATTTTGT TGGTAAAAAG 
AGGATTAAGA ACAGAAACTG TTTGTTATCT TCGCCTCAGC CATCGCCAAT GAGATGCAAA 
ATGATGATTC CATTTCCAAA GTTTGGTGCC ACATCCTTTG TTACGTTGCT CACTTTAATT 
TGTATGGAAA CTGTTTTGCT CTCCACCATG TCTAGTTGCG CCAAGACTTT TTACATGCAT 
TGGAACACAT CGAACAGTAT ATTTCGGATT GATAACACAG ATCATATTAT CGATGTTAAT 
AAAGGCAATC TTGCATTTGA GTTCGATCAG GTTCATATAA TATGCCCAGT ATATGAGCCA 
GGGACTTTTG AGAACGAAAC TGAAAAATAC ATAATTTACA ATGTGTCTAA AGTGGAGTAT 
GAAACTTGTC GCATAACAAA TGCAGATCCG CGAGTAATAG CTATATGTGA TAAACCTCAG 
AAATTAATGT TTTTTACAAT AACTTTCCGG CCATTTACAC CGCAGCCAGG TGGCTTGGAG 
TTCCTACCTG GAAATGATTA TTACTTTATT TCAACTTCAT CTAAGGATGA TTTATATCGA 
AGAATTGGAG GTCGATGCTC TACAAATAAC ATGAAAGTCG TCTTTAAAGT GTGTTGTGCC 
CCAGAGGACA ACAACAAAAC CACGGCGCTA AGCAATTCTA AATCTGTTAC AGACACCGGA 
GGAGCCATTA ATGTCAATAT AGCGAATAAT GATGAAAGTC ATGTGAATAG CCACGGCAAT 
AACATAGCTA TTGGAACCAA CATTGGTATA AATGGAGGCC AAATTATAGG GGGACCGCAG 
TCGGCAGGAA TTCCAATTAA TCCACTAAGC GGGAATAACA ATATAAATGG CATACCAACT 
ACTATTAATT CAAACATTGA TCAGTTTAAT CGGATTCCAA TCCAGCCAAA CATAATCGGT 
AATCATGTAG GGACTAATGC CGTAGGAACC GGAATTGTTG GTGGTGGAGG AATAATATTA 
ACTCCTGGCC ATGCTCATGG CAACATTAAT ATGCTGCAAC CAGGGCGAGG TGGAATAAAC 
GGAGCATATC CCGGACATCA CCACATCCAA ACTGGGATAC GGATAAACAA TGTGCCTACG 
CAACACAACT ATCCGTCCCA TAAGGGTAAT GCTAACAGTA ATATTAACGG AAACGATGAC 
CACCATCATT ACAACAAACA TCCCAACGAG GTTGTAAAAA ATGAAGAGCT GACCTATAAT 
AGTGGTGCTG CGACATCGGA TGGTAACATC TTCGCTTTAT GGATCTGGAT TTTATCAATT 
TTCCCACTGC TATCTATTCA ATCTTGCCAT TTGTCTTCAT ATTGGATAAG CGCATCATTT 
TTAGTCAGCA CTATTGCAAT TCTTGGCATT CACTATCTTA TTCAAATCAC TTTGCAAACC 
ACGGTGCAGC GATATAGTCC TGGAATGGTT GAAATCACCG CGACCTCTAT GAACGGGATG 
TTTGACCAGA ATGCTGGCAC TATTGAATAT GACCGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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Ephrin cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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