CG42233 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG42233
Entrez Gene ID	43754
Full Name	CG42233 gene product from transcript CG42233-RB
Synonyms	CG11574,CG2112,Dmel\CG42233,Dmel_CG11574,Dmel_CG2112
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3R Map Location: 100D2-100D2

mRNA and Protein(s)

mRNA	Protein	Name
NM_143642.4	NP_651899.2	uncharacterized protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG42233 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG42233 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa06806	NM_143642.4 Latest version!	Drosophila melanogaster uncharacterized protein (CG42233), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG42233 ( NM_143642.4 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_651899.2 Drosophila melanogaster uncharacterized protein (CG42233), mRNA.

Price & Availability↑

CloneID	OFa06806
Clone ID Related Accession (Same CDS sequence)	NM_143642.4
Accession Version	NM_143642.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2322bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jul 15, 2014 this sequence version replaced NM_143642.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCGTGAAC CTAGACCACT GCCCTGCTGG AGAACAGAAC AGAACCTAAA TCAGAGTCCC 
AGCCCCTTCA AGGGTAGCAT CTCGACCTCC GTGCAAAGAA AACCAGGTGA CGGAGCCCGG 
AAAATGAGCC TTTGGCGGAA CCTGCGCTCG CTGGAGACCC GCAATCTGGA CGTGGCCCTT 
AGCCAGCGTG AGAACATATT GGTGGCTGGC CACCTTCCCT CTGCCATTTT TCGCGAGCGA 
CTAAGTGCGG CTCAGAATCT CTACCAGCGC AACCTAACTG GTCACTACGG ATGTGTAAAT 
GCCCTGGAGT TCAGCTCGGG CGGTCAGTTC CTGGCTTCAG GAGGCGACGA CAAGAGGGTT 
CTACTATGGA ACATTGACCG CGAGCTTGTA TCCAAGCTCG GAAAACCCCG TTCCATGAAC 
GAGAAGCATG CCAGCAACAT CTTCTGCCTG GGATTTGACA CCCAAAACTC ATATATTTTT 
TCCGGGGGCA ACGATGACTT GGTCATCCAG CATGACCTAG AAACAGGGAA AATCCTGAAC 
CACTTTTCGC ACGATGGACC TGTTTATGGT TTAAGTGTAG ACAGGATCAG TGGCCATCTC 
TTAAGCGTGG CCACGGAGCA CGGTGAGATC CTAGTGTACG ATCTAAGGGC AGGAAAGTCC 
GAACCACTGG CAATCGCCAA GTTCAAGACG CCCTTTAACG CCGTGGAGTT TCACCCACTT 
AATGGTAATT TTCTGGCCAC TGCCAACGCG AAAAGGGGAG CCATGCTCTG GGATCTAAGG 
CACCACCAGC AGGCCCTGTG TCAGTACAAC TACATTCCGG AATCCCCAAG CTGCATGAGC 
GTGCGCTTCA ATTGCAACGG CACCCTTCTG CTCACCCTGC ACCGCCGGCT ACCGCCTATC 
CTGTATAGTC CTGGAGCCCC CGAGCCGGTG GCCACTTTCT ACCACGACGA ATACTTCAAC 
TCTTGCACTA TGAAGAGCTG CACATTTGCG GGGCCGCAGG ACGAGCTGGT GGTCTCAGGC 
TCGGACAACT TCAACATGTT TATCTGGCGG CTGGAAGGAG TGGACTTGGA TGAAAAGAAC 
CAGTGGATGG AGACTACGCC CGTAATTCTC GCTGGTCACC GTTCCATCGT AAACCAGGTG 
CGATACAATC GCGAACGCTG CTTACTCGCC TCCTCTGGCG TGGAGAAGAT CATTAAGCTG 
TGGAGTCCCT TTGCCCAGCA GGGCTGGGAG GGATCCCTTA CCCAAGCCGA AGCCCTGCCC 
TACTGCACAC GCGCACTATA TCGCGAGTCA TCGGATCATG TGTCGCAGGA CTTCAGTGCC 
CGCAGCACCG ACGAGGACCA GGTAATGCTG GCCTTCTTTG ACACTTTGGT GCAGCACGAG 
CTTGAGTCCT GGAGCACTGT GGACAATCAG AACAGCTCCA AAAGCAGCAC ACACACATCT 
ACGTGTAGCG AGGCCAGTTC GCCAACTGAA GAGCCCAGCG ACGAGGAGGA TCAGGACCCT 
CAGACTGACC GGAACCAAAA CGAAGAAAAT GTGCAAGACC AGGATATCGA TACGCCTAAC 
GTCAGCGAAC TGAGCTGGCA GACTTATCCG AACCGTATCT TCTACCTAAT CGCTAAAAAG 
CGCCGCTCCT TACTTCAGTT AGCGGTTAGG GGCACTTCTC GACATCCGCG CAACGTGGAC 
CAGTTGCTCC AGAGGCTCAT TGGCGAACAA AAACAGGCTG CCACGCAGGC GCGCATCAGC 
GACTGGCTTG AGGAGACGCA GCGTCTCTTT GGCGACGACG AGCTACCCAC CACATCAGCG 
GAGGCTGCAG CCCGTGAGCA GCGACGACGA GACGGCGTTC TGCTCTGTCG AAATCGGAGG 
ACACAAGAAT TTAAAATAGT TGAAACGCCA AAATCCAGAA TCACTCAAAG AACACGAAAG 
CGAAAATTAA GACAGCTCAT TCAAACCACA AAACACAGAA GAGCGACTGG TCGACCACGC 
ACCACCGAGA TGGACGAGGG CAGCGCCTCA AGCGACACCG GGGCTAGCTA CGACTCCGAT 
GAAGAGGAGA CCTCGTCAGG CGACAATAAC AACAACAATT CCAATGAAAG GGAAAGCGTC 
CGAACAGACG ATGATGGAGA CAATTCCTCC ACAACTTCGT TGACCTCTAT GGAGGCCCAG 
TTTTCTCAGG CTCCCAGCAC CTCCAGTTCT TTTCTTTTTC ACCAACTGGA GAGCAACAAC 
AACAGCCAGC ATACGTCCAA CCAAAATCAC AAAGCCTTGA ATGGACTAAT TCCGGATAAT 
TGTAATACTG AGTCAACAGC ATCCACATCG TCATCCATGT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_651899.2
CDS	173..2494
Translation	MREPRPLPCWRTEQNLNQSPSPFKGSISTSVQRKPGDGARKMSLWRNLRSLETRNLDVALSQRENILVAGHLPSAIFRERLSAAQNLYQRNLTGHYGCVNALEFSSGGQFLASGGDDKRVLLWNIDRELVSKLGKPRSMNEKHASNIFCLGFDTQNSYIFSGGNDDLVIQHDLETGKILNHFSHDGPVYGLSVDRISGHLLSVATEHGEILVYDLRAGKSEPLAIAKFKTPFNAVEFHPLNGNFLATANAKRGAMLWDLRHHQQALCQYNYIPESPSCMSVRFNCNGTLLLTLHRRLPPILYSPGAPEPVATFYHDEYFNSCTMKSCTFAGPQDELVVSGSDNFNMFIWRLEGVDLDEKNQWMETTPVILAGHRSIVNQVRYNRERCLLASSGVEKIIKLWSPFAQQGWEGSLTQAEALPYCTRALYRESSDHVSQDFSARSTDEDQVMLAFFDTLVQHELESWSTVDNQNSSKSSTHTSTCSEASSPTEEPSDEEDQDPQTDRNQNEENVQDQDIDTPNVSELSWQTYPNRIFYLIAKKRRSLLQLAVRGTSRHPRNVDQLLQRLIGEQKQAATQARISDWLEETQRLFGDDELPTTSAEAAAREQRRRDGVLLCRNRRTQEFKIVETPKSRITQRTRKRKLRQLIQTTKHRRATGRPRTTEMDEGSASSDTGASYDSDEEETSSGDNNNNNSNERESVRTDDDGDNSSTTSLTSMEAQFSQAPSTSSSFLFHQLESNNNSQHTSNQNHKALNGLIPDNCNTESTASTSSSM

Target ORF information:

RefSeq Version	NM_143642.4
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein (CG42233), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_143642.4

ORF Insert Sequence:

ATGCGTGAAC CTAGACCACT GCCCTGCTGG AGAACAGAAC AGAACCTAAA TCAGAGTCCC 
AGCCCCTTCA AGGGTAGCAT CTCGACCTCC GTGCAAAGAA AACCAGGTGA CGGAGCCCGG 
AAAATGAGCC TTTGGCGGAA CCTGCGCTCG CTGGAGACCC GCAATCTGGA CGTGGCCCTT 
AGCCAGCGTG AGAACATATT GGTGGCTGGC CACCTTCCCT CTGCCATTTT TCGCGAGCGA 
CTAAGTGCGG CTCAGAATCT CTACCAGCGC AACCTAACTG GTCACTACGG ATGTGTAAAT 
GCCCTGGAGT TCAGCTCGGG CGGTCAGTTC CTGGCTTCAG GAGGCGACGA CAAGAGGGTT 
CTACTATGGA ACATTGACCG CGAGCTTGTA TCCAAGCTCG GAAAACCCCG TTCCATGAAC 
GAGAAGCATG CCAGCAACAT CTTCTGCCTG GGATTTGACA CCCAAAACTC ATATATTTTT 
TCCGGGGGCA ACGATGACTT GGTCATCCAG CATGACCTAG AAACAGGGAA AATCCTGAAC 
CACTTTTCGC ACGATGGACC TGTTTATGGT TTAAGTGTAG ACAGGATCAG TGGCCATCTC 
TTAAGCGTGG CCACGGAGCA CGGTGAGATC CTAGTGTACG ATCTAAGGGC AGGAAAGTCC 
GAACCACTGG CAATCGCCAA GTTCAAGACG CCCTTTAACG CCGTGGAGTT TCACCCACTT 
AATGGTAATT TTCTGGCCAC TGCCAACGCG AAAAGGGGAG CCATGCTCTG GGATCTAAGG 
CACCACCAGC AGGCCCTGTG TCAGTACAAC TACATTCCGG AATCCCCAAG CTGCATGAGC 
GTGCGCTTCA ATTGCAACGG CACCCTTCTG CTCACCCTGC ACCGCCGGCT ACCGCCTATC 
CTGTATAGTC CTGGAGCCCC CGAGCCGGTG GCCACTTTCT ACCACGACGA ATACTTCAAC 
TCTTGCACTA TGAAGAGCTG CACATTTGCG GGGCCGCAGG ACGAGCTGGT GGTCTCAGGC 
TCGGACAACT TCAACATGTT TATCTGGCGG CTGGAAGGAG TGGACTTGGA TGAAAAGAAC 
CAGTGGATGG AGACTACGCC CGTAATTCTC GCTGGTCACC GTTCCATCGT AAACCAGGTG 
CGATACAATC GCGAACGCTG CTTACTCGCC TCCTCTGGCG TGGAGAAGAT CATTAAGCTG 
TGGAGTCCCT TTGCCCAGCA GGGCTGGGAG GGATCCCTTA CCCAAGCCGA AGCCCTGCCC 
TACTGCACAC GCGCACTATA TCGCGAGTCA TCGGATCATG TGTCGCAGGA CTTCAGTGCC 
CGCAGCACCG ACGAGGACCA GGTAATGCTG GCCTTCTTTG ACACTTTGGT GCAGCACGAG 
CTTGAGTCCT GGAGCACTGT GGACAATCAG AACAGCTCCA AAAGCAGCAC ACACACATCT 
ACGTGTAGCG AGGCCAGTTC GCCAACTGAA GAGCCCAGCG ACGAGGAGGA TCAGGACCCT 
CAGACTGACC GGAACCAAAA CGAAGAAAAT GTGCAAGACC AGGATATCGA TACGCCTAAC 
GTCAGCGAAC TGAGCTGGCA GACTTATCCG AACCGTATCT TCTACCTAAT CGCTAAAAAG 
CGCCGCTCCT TACTTCAGTT AGCGGTTAGG GGCACTTCTC GACATCCGCG CAACGTGGAC 
CAGTTGCTCC AGAGGCTCAT TGGCGAACAA AAACAGGCTG CCACGCAGGC GCGCATCAGC 
GACTGGCTTG AGGAGACGCA GCGTCTCTTT GGCGACGACG AGCTACCCAC CACATCAGCG 
GAGGCTGCAG CCCGTGAGCA GCGACGACGA GACGGCGTTC TGCTCTGTCG AAATCGGAGG 
ACACAAGAAT TTAAAATAGT TGAAACGCCA AAATCCAGAA TCACTCAAAG AACACGAAAG 
CGAAAATTAA GACAGCTCAT TCAAACCACA AAACACAGAA GAGCGACTGG TCGACCACGC 
ACCACCGAGA TGGACGAGGG CAGCGCCTCA AGCGACACCG GGGCTAGCTA CGACTCCGAT 
GAAGAGGAGA CCTCGTCAGG CGACAATAAC AACAACAATT CCAATGAAAG GGAAAGCGTC 
CGAACAGACG ATGATGGAGA CAATTCCTCC ACAACTTCGT TGACCTCTAT GGAGGCCCAG 
TTTTCTCAGG CTCCCAGCAC CTCCAGTTCT TTTCTTTTTC ACCAACTGGA GAGCAACAAC 
AACAGCCAGC ATACGTCCAA CCAAAATCAC AAAGCCTTGA ATGGACTAAT TCCGGATAAT 
TGTAATACTG AGTCAACAGC ATCCACATCG TCATCCATGT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG42233 cDNA ORF clone, Drosophila melanogaster(fruit fly)

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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