CG5882 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG5882
Entrez Gene ID	43269
Full Name	CG5882 gene product from transcript CG5882-RA
Synonyms	Dmel\CG5882
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3R Map Location: 97E2-97E3

mRNA and Protein(s)

mRNA	Protein	Name
NM_143283.1	NP_651540.1	uncharacterized protein

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	CCDC147	XP_003640046.1
Bos taurus (cattle)	CCDC147	XP_002698546.2
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP003679	XP_313461.4
Xenopus tropicalis (tropical clawed frog)	ccdc147	NP_001119542.1
Pan troglodytes (chimpanzee)	CCDC147	XP_508023.4
	CCDC147	XP_002805859.1
Homo sapiens (human)	CCDC147	NP_001008723.1
Gallus gallus (chicken)	CCDC147	XP_421748.3
Danio rerio (zebrafish)	ccdc147	NP_001071024.2
Drosophila melanogaster (fruit fly)	CG5882	NP_651540.1
Mus musculus (house mouse)	Ccdc147	NP_001156739.1
Rattus norvegicus (Norway rat)	Ccdc147	XP_003749187.1
Rattus norvegicus (Norway rat)	LOC102553148	XP_006231656.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG5882 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG5882 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa06295	NM_143283.1 Latest version!	Drosophila melanogaster uncharacterized protein (CG5882), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$510.30 $729.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG5882 ( NM_143283.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_651540.1 Drosophila melanogaster uncharacterized protein (CG5882), partial mRNA.

Price & Availability↑

CloneID	OFa06295
Clone ID Related Accession (Same CDS sequence)	NM_143283.1
Accession Version	NM_143283.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2601bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends.

ATGTCGAAAG CTTCCGGATC AGAAGATGAA CCTCTGGTAC CAGATGACTT CGATGATGAC 
TTTTACAAGG AACTATGCGA CAAAATCCCT GAGGCCACCA AAGCTCTGCG GCAAAAGGAT 
ACTCCCAACA ATGCGGATAA TGTCCAGAGG CTGCTCATCT GCGGCAGTCG CTATAAAAGC 
GATCTCAGAC TTGAGAAGGA ACGCTCCCAG GAACTGCGAA AGGAGATTGA AAGCCTCGAA 
GAGCGCTTGG AAAATGCGGC TCGGGTTACC AAATTGGACA TGGCCACCAT TGAGGAGCTA 
CGTGGAGTAA TAGAGGGTGC CTGGAAGCAG AAGGATGCTG CTCAGATTCG TGAGCAATCC 
GCTCAGGACG AGGTCCTAAG TCTGCGCGAA AAACTGGATG AGTCAGAGCA GATGGTCGCC 
CATCTAAATG AGAAACGGCT GGCCATGAGC AAGCGGGACG ATGGCAAGGA ACGGGAGCGA 
CTCAACGCCG AGATTGCAGA TCTCAACAAG CGATTGCATT TGCAACGGAC CTACGCCACG 
GAACTGGACC ACACCATCGA AGGATTGGAG GCTAAAAACA AGGAACTGCT CAAGCTACTG 
GATGAAACTT CCAGCGATGC CTGCAACTTG AAACGAAAAA GTGATGCCTT GACCAAGGAA 
CTTTCTACGA TGAAGACCGA GGAGTCCCGC TACCAGGAGC AAATATCCCA GATGAAGTCC 
GCTAACGAGC ACTTGACCAA GGTGAAAGTG CGCCAGAACC TGCAAATTCT GTCCCTCAAG 
ACGAACCTGG AACATCTAAA TACCCAGCAC AATGCGGCCA ACAACAAGCT GGCCAAGATC 
ACGGTGGACT TGGAGTACAC GGTGCAGGAA AGGGATAAGA ACAAGCGTGC TCTGAATCAG 
CGCATCAATC TACTGAAGGT GCGCGAGGAT GAATTGATTA AGGTGCGCCA GGACAATGGG 
AAGCTGGCCA AGTCCCAGGA GGCGATTGCT CGGAAATATG CGGTATTAGA CGAGGCCAAA 
CGGGAAGTGG AAACGCTGAA CATAAGGCTC AGAACCCAGC TGGGCACCCA AGACAAGGAG 
CTGGAGTCGA TGCGCCGGGT GGTCCATCAC TTCGAGAAGA ACAACGAAAA CTTGACCAAA 
GAGCGGGATT CCCTAAGGCG GGAACTGCAG GCGGAGCACC ATCAGCTCGA GCAGAGCAAT 
GCACAGCACC AAGAGGCGCA GCACGAGGTG CGAGCTCTTA AGGACACCAT CACCACGATG 
GACACAAAGC TGAAGAAGCT CAACGAGGAC GCCAACAAGC TCAAGAAGGA GAAGACCAAA 
AAGCTGGACG AGATTCAGCA CTGGATAGAC AAATTGGATG CTTTGCAGAA TGAGATGCAC 
TTGAAGGAGA ACTACGAGAT CGAACTGAAG CGCACCATCA GCGACTTGGA AGCCAAGTGC 
TCCAAGTTCC AGCAACAGCA TGATGGTCTT GCCGCTGAGC GCCAAACTCT TCAGCGGAGT 
GTCCAGTTGG CCGATGAGGA GCGGCAAAAG CTTCGCGATC AGCTGGTGAA TCTGCAGGCG 
CACGTCGAGA AACTAAAGGC CAAGATCGGT TACAGGGATG GCGAGATCTC CAGACTTCAG 
TTGCAGATCG ATCGCATGGA GAAGGAGCGC CGACTGCTAC GCAACGAAAT CCGGCATGCC 
CAGCTTGGTC AGCAGCACAC CAAGGCTGAA CTGCTGGACA AGCGGAAGGA GAACGATCGG 
CACGCCAAGT CGCTGCAAGA GGACGAGCAG AAGCTGGCGC GCCTGCGCAA GGATGTGGAC 
AACCTGATGA ACGAGAAGAA TGCGATTAGT GCGGCGCTGA CCAAACGCAA CGAGGAGTTC 
GATCGACTCA AGCACAGCCA GGAGAACCTG CAAACGGTGT ACGATCAGAC CCAGAGGCAG 
TGCAGCCAGT ATCAGGATGA TATGCGTCTA ATGGGCGTGG AGATAAAGAA TCTGCGTACG 
GAAAGGGATG TCCTGCGCGC GGATAGAGAG AGTGCAGCGG ATCTGCGCCA GGAACTGTTA 
CAAATGCATC GCATGCTCAA CCAGGAACGA ATCAAGGCGC GTGCCCTGCA GGACGAGATG 
GTTACGCCGA TGAATGTGCA TCGGTGGCGT CTCCTGAGCG GCAAGGATCC AGAAAAAATG 
GACCTGCTCG GACGCATTAG CATCCTCCGA AAGCAGTTGC TCCAGCAGAA CGTTGCCGCC 
TCGGAGCAGG AACGGGCCCT CAATGAAGCC CAACAGCTCT ATGCGGCCTT GAGGGAGTTC 
ATGCTCAAGC TGCCCAGCCA TAAAGTGCGG GCGGAGCTCA ACAGCGTTAA GGCTAACCTA 
TCCGCCAAGG ATCGCAAACT GAAGGTCCTA AAGGCCGAGC TCAGTGCCCG CGAGGCAGAC 
GAGAAGTCCA AAAAGGAGAA GCTTGAAGAG ATGCGGGTGA GTTTGGCTCT AACCAAGACC 
CAACTGCTAG AGGAGAAGAA GCACAAGCAG AAGTTACTTG AGGAGCGACA GTTGCTGGAG 
CAGATGCATT GCTACTCCGC GCCCGCCCAA CTGCCTAGGA CTCTGGGTGC GGGTTTCAAG 
ATGGTCAGTA GTCTACTCTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_651540.1
CDS	1..2601
Translation	MSKASGSEDEPLVPDDFDDDFYKELCDKIPEATKALRQKDTPNNADNVQRLLICGSRYKSDLRLEKERSQELRKEIESLEERLENAARVTKLDMATIEELRGVIEGAWKQKDAAQIREQSAQDEVLSLREKLDESEQMVAHLNEKRLAMSKRDDGKERERLNAEIADLNKRLHLQRTYATELDHTIEGLEAKNKELLKLLDETSSDACNLKRKSDALTKELSTMKTEESRYQEQISQMKSANEHLTKVKVRQNLQILSLKTNLEHLNTQHNAANNKLAKITVDLEYTVQERDKNKRALNQRINLLKVREDELIKVRQDNGKLAKSQEAIARKYAVLDEAKREVETLNIRLRTQLGTQDKELESMRRVVHHFEKNNENLTKERDSLRRELQAEHHQLEQSNAQHQEAQHEVRALKDTITTMDTKLKKLNEDANKLKKEKTKKLDEIQHWIDKLDALQNEMHLKENYEIELKRTISDLEAKCSKFQQQHDGLAAERQTLQRSVQLADEERQKLRDQLVNLQAHVEKLKAKIGYRDGEISRLQLQIDRMEKERRLLRNEIRHAQLGQQHTKAELLDKRKENDRHAKSLQEDEQKLARLRKDVDNLMNEKNAISAALTKRNEEFDRLKHSQENLQTVYDQTQRQCSQYQDDMRLMGVEIKNLRTERDVLRADRESAADLRQELLQMHRMLNQERIKARALQDEMVTPMNVHRWRLLSGKDPEKMDLLGRISILRKQLLQQNVAASEQERALNEAQQLYAALREFMLKLPSHKVRAELNSVKANLSAKDRKLKVLKAELSAREADEKSKKEKLEEMRVSLALTKTQLLEEKKHKQKLLEERQLLEQMHCYSAPAQLPRTLGAGFKMVSSLL

Target ORF information:

RefSeq Version	NM_143283.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein (CG5882), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_143283.1

ORF Insert Sequence:

ATGTCGAAAG CTTCCGGATC AGAAGATGAA CCTCTGGTAC CAGATGACTT CGATGATGAC 
TTTTACAAGG AACTATGCGA CAAAATCCCT GAGGCCACCA AAGCTCTGCG GCAAAAGGAT 
ACTCCCAACA ATGCGGATAA TGTCCAGAGG CTGCTCATCT GCGGCAGTCG CTATAAAAGC 
GATCTCAGAC TTGAGAAGGA ACGCTCCCAG GAACTGCGAA AGGAGATTGA AAGCCTCGAA 
GAGCGCTTGG AAAATGCGGC TCGGGTTACC AAATTGGACA TGGCCACCAT TGAGGAGCTA 
CGTGGAGTAA TAGAGGGTGC CTGGAAGCAG AAGGATGCTG CTCAGATTCG TGAGCAATCC 
GCTCAGGACG AGGTCCTAAG TCTGCGCGAA AAACTGGATG AGTCAGAGCA GATGGTCGCC 
CATCTAAATG AGAAACGGCT GGCCATGAGC AAGCGGGACG ATGGCAAGGA ACGGGAGCGA 
CTCAACGCCG AGATTGCAGA TCTCAACAAG CGATTGCATT TGCAACGGAC CTACGCCACG 
GAACTGGACC ACACCATCGA AGGATTGGAG GCTAAAAACA AGGAACTGCT CAAGCTACTG 
GATGAAACTT CCAGCGATGC CTGCAACTTG AAACGAAAAA GTGATGCCTT GACCAAGGAA 
CTTTCTACGA TGAAGACCGA GGAGTCCCGC TACCAGGAGC AAATATCCCA GATGAAGTCC 
GCTAACGAGC ACTTGACCAA GGTGAAAGTG CGCCAGAACC TGCAAATTCT GTCCCTCAAG 
ACGAACCTGG AACATCTAAA TACCCAGCAC AATGCGGCCA ACAACAAGCT GGCCAAGATC 
ACGGTGGACT TGGAGTACAC GGTGCAGGAA AGGGATAAGA ACAAGCGTGC TCTGAATCAG 
CGCATCAATC TACTGAAGGT GCGCGAGGAT GAATTGATTA AGGTGCGCCA GGACAATGGG 
AAGCTGGCCA AGTCCCAGGA GGCGATTGCT CGGAAATATG CGGTATTAGA CGAGGCCAAA 
CGGGAAGTGG AAACGCTGAA CATAAGGCTC AGAACCCAGC TGGGCACCCA AGACAAGGAG 
CTGGAGTCGA TGCGCCGGGT GGTCCATCAC TTCGAGAAGA ACAACGAAAA CTTGACCAAA 
GAGCGGGATT CCCTAAGGCG GGAACTGCAG GCGGAGCACC ATCAGCTCGA GCAGAGCAAT 
GCACAGCACC AAGAGGCGCA GCACGAGGTG CGAGCTCTTA AGGACACCAT CACCACGATG 
GACACAAAGC TGAAGAAGCT CAACGAGGAC GCCAACAAGC TCAAGAAGGA GAAGACCAAA 
AAGCTGGACG AGATTCAGCA CTGGATAGAC AAATTGGATG CTTTGCAGAA TGAGATGCAC 
TTGAAGGAGA ACTACGAGAT CGAACTGAAG CGCACCATCA GCGACTTGGA AGCCAAGTGC 
TCCAAGTTCC AGCAACAGCA TGATGGTCTT GCCGCTGAGC GCCAAACTCT TCAGCGGAGT 
GTCCAGTTGG CCGATGAGGA GCGGCAAAAG CTTCGCGATC AGCTGGTGAA TCTGCAGGCG 
CACGTCGAGA AACTAAAGGC CAAGATCGGT TACAGGGATG GCGAGATCTC CAGACTTCAG 
TTGCAGATCG ATCGCATGGA GAAGGAGCGC CGACTGCTAC GCAACGAAAT CCGGCATGCC 
CAGCTTGGTC AGCAGCACAC CAAGGCTGAA CTGCTGGACA AGCGGAAGGA GAACGATCGG 
CACGCCAAGT CGCTGCAAGA GGACGAGCAG AAGCTGGCGC GCCTGCGCAA GGATGTGGAC 
AACCTGATGA ACGAGAAGAA TGCGATTAGT GCGGCGCTGA CCAAACGCAA CGAGGAGTTC 
GATCGACTCA AGCACAGCCA GGAGAACCTG CAAACGGTGT ACGATCAGAC CCAGAGGCAG 
TGCAGCCAGT ATCAGGATGA TATGCGTCTA ATGGGCGTGG AGATAAAGAA TCTGCGTACG 
GAAAGGGATG TCCTGCGCGC GGATAGAGAG AGTGCAGCGG ATCTGCGCCA GGAACTGTTA 
CAAATGCATC GCATGCTCAA CCAGGAACGA ATCAAGGCGC GTGCCCTGCA GGACGAGATG 
GTTACGCCGA TGAATGTGCA TCGGTGGCGT CTCCTGAGCG GCAAGGATCC AGAAAAAATG 
GACCTGCTCG GACGCATTAG CATCCTCCGA AAGCAGTTGC TCCAGCAGAA CGTTGCCGCC 
TCGGAGCAGG AACGGGCCCT CAATGAAGCC CAACAGCTCT ATGCGGCCTT GAGGGAGTTC 
ATGCTCAAGC TGCCCAGCCA TAAAGTGCGG GCGGAGCTCA ACAGCGTTAA GGCTAACCTA 
TCCGCCAAGG ATCGCAAACT GAAGGTCCTA AAGGCCGAGC TCAGTGCCCG CGAGGCAGAC 
GAGAAGTCCA AAAAGGAGAA GCTTGAAGAG ATGCGGGTGA GTTTGGCTCT AACCAAGACC 
CAACTGCTAG AGGAGAAGAA GCACAAGCAG AAGTTACTTG AGGAGCGACA GTTGCTGGAG 
CAGATGCATT GCTACTCCGC GCCCGCCCAA CTGCCTAGGA CTCTGGGTGC GGGTTTCAAG 
ATGGTCAGTA GTCTACTCTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG5882 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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