fd96Ca cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	fd96Ca
Entrez Gene ID	43010
Full Name	forkhead domain 96Ca
Synonyms	CG11921,Dmel\CG11921,Dmfd4,FD4,fd4
General protein information	Preferred Names forkhead domain 96Ca Names CG11921 gene product from transcript CG11921-RB CG11921-PA CG11921-PB fd96Ca-PA fd96Ca-PB
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3R Map Location: 96B20-96B20

mRNA and Protein(s)

mRNA	Protein	Name
NM_001300587.1	NP_001287516.1	forkhead domain 96Ca, isoform B
NM_079771.2	NP_524495.1	forkhead domain 96Ca, isoform A

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following fd96Ca gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the fd96Ca cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa08805	NM_001300587.1 Latest version!	Drosophila melanogaster forkhead domain 96Ca (fd96Ca), transcript variant B, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
OFa08805	NM_079771.2 Latest version!	Drosophila melanogaster forkhead domain 96Ca (fd96Ca), transcript variant A, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

fd96Ca ( NM_001300587.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001287516.1 Drosophila melanogaster forkhead domain 96Ca (fd96Ca), transcript variant B, mRNA.

Price & Availability↑

CloneID	OFa08805
Clone ID Related Accession (Same CDS sequence)	NM_001300587.1 , NM_079771.2
Accession Version	NM_001300587.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1119bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	forkhead domain 96Ca, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCCCCGGC CCTCGCGAGA ATCCTACGGC GAACAGAAGC CCCCCTATTC GTACATTTCG 
CTAACGGCCA TGGCCATCTG GAGTTCGCCG GAGAAAATGT TGCCGCTCAG CGATATCTAC 
AAGTTTATCA CGGACCGATT TCCGTACTAC CGCAAGAACA CCCAGCGCTG GCAAAATTCG 
CTGAGGCACA ATCTCAGCTT CAACGATTGC TTCATCAAGG TGCCCCGACG GCCGGATAGA 
CCCGGCAAGG GAGCCTACTG GGCACTGCAT CCGCAGGCCT TTGATATGTT CGAAAACGGC 
AGCCTGCTCC GGCGGAGGAA GCGCTTCAAG CTGCACAAGA ACGACAAGGA TCTGCTCAAC 
GAGGAGCTGA CTGCCCTGGC GAACCTCAAT AGATTCTTCT TTACCACCCG TAACGGAGGC 
AGTGCAGCGC ACATGTCGCC GCTGGATATG AACAATGCGG CCGCCATGAG ACTGGATCCA 
CTGCCCAGGA GCACGGCGCA CATGCCAAAC TCCCTGGGTC CAGGTGTGCC ACTGCCGCAC 
GTAATGCCCG CCTCCATGTC CGGTGCGGAT CACACGAATC TGGCGGACAT GGGACTGACC 
AATCTGCCCG CGCTAACCAG TTCCGAGATC GAGGGACCGC TGAGCCTGCG ACCCAAGCGA 
TCCTTCACGA TAGAGAGCCT GATCACGCCC GACAAGCCGG AACATCCGTC GGAGGACGAG 
GACGACGAGG ATGACCGCGT CGATATCGAT GTGGTCGAGT GCAGCGGTAT CAGCCGCTAT 
CCCACAACGC CCGCCGCCTC CGAGGAGTAT ATGTCCGCCA GCCGATCGAG CCGAACGGAG 
GATCCCCTGC CGCCGATGCA CACGATCAAC GCCGGTGCCC ACGTGCCGTT TCTGCACTAT 
GCCACGGGTG CCAATGTGGC CGGACTGCCA GCGTCGGGAA TACCCAATAG CCCCACCACC 
TACGAGCTGG CCATCTCGCA TCCGCTCTTC ATGATGGCGG CGCCCATTGC CAACATGCAC 
AACATATACT ACAATAATGT TACCCTCGTC GCTCCGGCGC AGCAATATCG GAGCCCCGAG 
GTGCAGAATA GAATAGACAA CGATATGCGT ACGATATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001287516.1
CDS	869..1987
Translation	MPRPSRESYGEQKPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHNLSFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKRFKLHKNDKDLLNEELTALANLNRFFFTTRNGGSAAHMSPLDMNNAAAMRLDPLPRSTAHMPNSLGPGVPLPHVMPASMSGADHTNLADMGLTNLPALTSSEIEGPLSLRPKRSFTIESLITPDKPEHPSEDEDDEDDRVDIDVVECSGISRYPTTPAASEEYMSASRSSRTEDPLPPMHTINAGAHVPFLHYATGANVAGLPASGIPNSPTTYELAISHPLFMMAAPIANMHNIYYNNVTLVAPAQQYRSPEVQNRIDNDMRTI

Target ORF information:

RefSeq Version	NM_001300587.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster forkhead domain 96Ca (fd96Ca), transcript variant B, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001300587.1

ORF Insert Sequence:

ATGCCCCGGC CCTCGCGAGA ATCCTACGGC GAACAGAAGC CCCCCTATTC GTACATTTCG 
CTAACGGCCA TGGCCATCTG GAGTTCGCCG GAGAAAATGT TGCCGCTCAG CGATATCTAC 
AAGTTTATCA CGGACCGATT TCCGTACTAC CGCAAGAACA CCCAGCGCTG GCAAAATTCG 
CTGAGGCACA ATCTCAGCTT CAACGATTGC TTCATCAAGG TGCCCCGACG GCCGGATAGA 
CCCGGCAAGG GAGCCTACTG GGCACTGCAT CCGCAGGCCT TTGATATGTT CGAAAACGGC 
AGCCTGCTCC GGCGGAGGAA GCGCTTCAAG CTGCACAAGA ACGACAAGGA TCTGCTCAAC 
GAGGAGCTGA CTGCCCTGGC GAACCTCAAT AGATTCTTCT TTACCACCCG TAACGGAGGC 
AGTGCAGCGC ACATGTCGCC GCTGGATATG AACAATGCGG CCGCCATGAG ACTGGATCCA 
CTGCCCAGGA GCACGGCGCA CATGCCAAAC TCCCTGGGTC CAGGTGTGCC ACTGCCGCAC 
GTAATGCCCG CCTCCATGTC CGGTGCGGAT CACACGAATC TGGCGGACAT GGGACTGACC 
AATCTGCCCG CGCTAACCAG TTCCGAGATC GAGGGACCGC TGAGCCTGCG ACCCAAGCGA 
TCCTTCACGA TAGAGAGCCT GATCACGCCC GACAAGCCGG AACATCCGTC GGAGGACGAG 
GACGACGAGG ATGACCGCGT CGATATCGAT GTGGTCGAGT GCAGCGGTAT CAGCCGCTAT 
CCCACAACGC CCGCCGCCTC CGAGGAGTAT ATGTCCGCCA GCCGATCGAG CCGAACGGAG 
GATCCCCTGC CGCCGATGCA CACGATCAAC GCCGGTGCCC ACGTGCCGTT TCTGCACTAT 
GCCACGGGTG CCAATGTGGC CGGACTGCCA GCGTCGGGAA TACCCAATAG CCCCACCACC 
TACGAGCTGG CCATCTCGCA TCCGCTCTTC ATGATGGCGG CGCCCATTGC CAACATGCAC 
AACATATACT ACAATAATGT TACCCTCGTC GCTCCGGCGC AGCAATATCG GAGCCCCGAG 
GTGCAGAATA GAATAGACAA CGATATGCGT ACGATATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

fd96Ca ( NM_079771.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_524495.1 Drosophila melanogaster forkhead domain 96Ca (fd96Ca), transcript variant A, mRNA.

Price & Availability↑

CloneID	OFa08805
Clone ID Related Accession (Same CDS sequence)	NM_001300587.1 , NM_079771.2
Accession Version	NM_079771.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1119bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	forkhead domain 96Ca, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jul 15, 2014 this sequence version replaced NM_079771.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCCCCGGC CCTCGCGAGA ATCCTACGGC GAACAGAAGC CCCCCTATTC GTACATTTCG 
CTAACGGCCA TGGCCATCTG GAGTTCGCCG GAGAAAATGT TGCCGCTCAG CGATATCTAC 
AAGTTTATCA CGGACCGATT TCCGTACTAC CGCAAGAACA CCCAGCGCTG GCAAAATTCG 
CTGAGGCACA ATCTCAGCTT CAACGATTGC TTCATCAAGG TGCCCCGACG GCCGGATAGA 
CCCGGCAAGG GAGCCTACTG GGCACTGCAT CCGCAGGCCT TTGATATGTT CGAAAACGGC 
AGCCTGCTCC GGCGGAGGAA GCGCTTCAAG CTGCACAAGA ACGACAAGGA TCTGCTCAAC 
GAGGAGCTGA CTGCCCTGGC GAACCTCAAT AGATTCTTCT TTACCACCCG TAACGGAGGC 
AGTGCAGCGC ACATGTCGCC GCTGGATATG AACAATGCGG CCGCCATGAG ACTGGATCCA 
CTGCCCAGGA GCACGGCGCA CATGCCAAAC TCCCTGGGTC CAGGTGTGCC ACTGCCGCAC 
GTAATGCCCG CCTCCATGTC CGGTGCGGAT CACACGAATC TGGCGGACAT GGGACTGACC 
AATCTGCCCG CGCTAACCAG TTCCGAGATC GAGGGACCGC TGAGCCTGCG ACCCAAGCGA 
TCCTTCACGA TAGAGAGCCT GATCACGCCC GACAAGCCGG AACATCCGTC GGAGGACGAG 
GACGACGAGG ATGACCGCGT CGATATCGAT GTGGTCGAGT GCAGCGGTAT CAGCCGCTAT 
CCCACAACGC CCGCCGCCTC CGAGGAGTAT ATGTCCGCCA GCCGATCGAG CCGAACGGAG 
GATCCCCTGC CGCCGATGCA CACGATCAAC GCCGGTGCCC ACGTGCCGTT TCTGCACTAT 
GCCACGGGTG CCAATGTGGC CGGACTGCCA GCGTCGGGAA TACCCAATAG CCCCACCACC 
TACGAGCTGG CCATCTCGCA TCCGCTCTTC ATGATGGCGG CGCCCATTGC CAACATGCAC 
AACATATACT ACAATAATGT TACCCTCGTC GCTCCGGCGC AGCAATATCG GAGCCCCGAG 
GTGCAGAATA GAATAGACAA CGATATGCGT ACGATATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_524495.1
CDS	376..1494
Translation	MPRPSRESYGEQKPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHNLSFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKRFKLHKNDKDLLNEELTALANLNRFFFTTRNGGSAAHMSPLDMNNAAAMRLDPLPRSTAHMPNSLGPGVPLPHVMPASMSGADHTNLADMGLTNLPALTSSEIEGPLSLRPKRSFTIESLITPDKPEHPSEDEDDEDDRVDIDVVECSGISRYPTTPAASEEYMSASRSSRTEDPLPPMHTINAGAHVPFLHYATGANVAGLPASGIPNSPTTYELAISHPLFMMAAPIANMHNIYYNNVTLVAPAQQYRSPEVQNRIDNDMRTI

Target ORF information:

RefSeq Version	NM_079771.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster forkhead domain 96Ca (fd96Ca), transcript variant A, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_079771.2

ORF Insert Sequence:

ATGCCCCGGC CCTCGCGAGA ATCCTACGGC GAACAGAAGC CCCCCTATTC GTACATTTCG 
CTAACGGCCA TGGCCATCTG GAGTTCGCCG GAGAAAATGT TGCCGCTCAG CGATATCTAC 
AAGTTTATCA CGGACCGATT TCCGTACTAC CGCAAGAACA CCCAGCGCTG GCAAAATTCG 
CTGAGGCACA ATCTCAGCTT CAACGATTGC TTCATCAAGG TGCCCCGACG GCCGGATAGA 
CCCGGCAAGG GAGCCTACTG GGCACTGCAT CCGCAGGCCT TTGATATGTT CGAAAACGGC 
AGCCTGCTCC GGCGGAGGAA GCGCTTCAAG CTGCACAAGA ACGACAAGGA TCTGCTCAAC 
GAGGAGCTGA CTGCCCTGGC GAACCTCAAT AGATTCTTCT TTACCACCCG TAACGGAGGC 
AGTGCAGCGC ACATGTCGCC GCTGGATATG AACAATGCGG CCGCCATGAG ACTGGATCCA 
CTGCCCAGGA GCACGGCGCA CATGCCAAAC TCCCTGGGTC CAGGTGTGCC ACTGCCGCAC 
GTAATGCCCG CCTCCATGTC CGGTGCGGAT CACACGAATC TGGCGGACAT GGGACTGACC 
AATCTGCCCG CGCTAACCAG TTCCGAGATC GAGGGACCGC TGAGCCTGCG ACCCAAGCGA 
TCCTTCACGA TAGAGAGCCT GATCACGCCC GACAAGCCGG AACATCCGTC GGAGGACGAG 
GACGACGAGG ATGACCGCGT CGATATCGAT GTGGTCGAGT GCAGCGGTAT CAGCCGCTAT 
CCCACAACGC CCGCCGCCTC CGAGGAGTAT ATGTCCGCCA GCCGATCGAG CCGAACGGAG 
GATCCCCTGC CGCCGATGCA CACGATCAAC GCCGGTGCCC ACGTGCCGTT TCTGCACTAT 
GCCACGGGTG CCAATGTGGC CGGACTGCCA GCGTCGGGAA TACCCAATAG CCCCACCACC 
TACGAGCTGG CCATCTCGCA TCCGCTCTTC ATGATGGCGG CGCCCATTGC CAACATGCAC 
AACATATACT ACAATAATGT TACCCTCGTC GCTCCGGCGC AGCAATATCG GAGCCCCGAG 
GTGCAGAATA GAATAGACAA CGATATGCGT ACGATATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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fd96Ca cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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