CG5515 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG5515
Entrez Gene ID	42875
Full Name	CG5515 gene product from transcript CG5515-RC
Synonyms	Dmel\CG5515
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3R Map Location: 95E8-95E8

mRNA and Protein(s)

mRNA	Protein	Name
NM_176554.2	NP_788731.1	uncharacterized protein, isoform B
NM_001275972.1	NP_001262901.1	uncharacterized protein, isoform C
NM_142970.3	NP_651227.2	uncharacterized protein, isoform A
NM_001300570.1	NP_001287499.1	uncharacterized protein, isoform D

Pathways from BioSystems

Homologies

Homo sapiens (human)	RWDD1	NP_057036.2
Caenorhabditis elegans (roundworm)	CELE_T26E3.4	NP_493207.1
	RWDD1	XP_001111296.1
Bos taurus (cattle)	RWDD1	NP_001029898.1
Drosophila melanogaster (fruit fly)	CG5515	NP_001262901.1
Oryza sativa (rice)	Os01g0558300	NP_001043334.1
Canis lupus familiaris (dog)	RWDD1	XP_851223.1
Xenopus tropicalis (tropical clawed frog)	rwdd1	NP_001005815.1
Pan troglodytes (chimpanzee)	RWDD1	XP_518709.2
Mus musculus (house mouse)	Rwdd1	NP_079890.1
Rattus norvegicus (Norway rat)	Rwdd1	NP_671487.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP003063	XP_312750.4
Gallus gallus (chicken)	RWDD1	NP_001026246.2
Danio rerio (zebrafish)	rwdd1	NP_001002535.1
Arabidopsis thaliana (thale cress)	AT1G51730	NP_175584.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG5515 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG5515 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OFa05910	NM_142970.3 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant A (CG5515), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OFa05910	NM_176554.2 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant B (CG5515), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OFa05910	NM_001275972.1 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant C (CG5515), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OFa05910	NM_001300570.1 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant D (CG5515), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG5515 ( NM_176554.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_788731.1 Drosophila melanogaster uncharacterized protein, transcript variant B (CG5515), mRNA.

Price & Availability↑

CloneID	OFa05910
Clone ID Related Accession (Same CDS sequence)	NM_176554.2 , NM_001275972.1 , NM_142970.3 , NM_001300570.1
Accession Version	NM_176554.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 735bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jan 16, 2013 this sequence version replaced NM_176554.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAGCCGCA ACTACAAGGA AGATCAGACC AACGAGGTCG AGGCGTTGGA CTCCATATAC 
TGTGGCGATA TGGAGATTCT CGCCACGGAG CCGCACCACA AATTCCAGAT TCCAATTGCC 
ACGGAGGAGT ACAGTTCGGA GGAGCCCGAG AAAGGTCTTG CCTGCAAACT GGTCTTCACA 
TTCACAGCTA CCTATCCGGA TGGAGCACCC GTGGTGGAAA TCGAGGAGCC AGAAAACTTT 
GAGGACATGT TTGAAACGCG CCTCCTGGAA CACCTGCAAA AGACAATTGA GGAGAACCTG 
GGCATGGAGA TGATCTTTTC GCTGGTAAGC AGCGCCCAGG AGTGGCTGAA CGAGCGGTGG 
GATGAACACA AGTTCCACCA GGAGGAACTG CGAGAGCAGA AGCTGCGGGA AATCGAAGAG 
GAGGAACGCA AGAAGTTTGA GGGCACCCGT GTGACGGTGG AGTCCTTCCT CAAATGGAAG 
CTCGAATTCG AGGAGAGCAC CGGCATTGCC GCCAAGCGGG AGAAGAACAA TGTGTCCAAG 
AAGCAGACCG GACGCGAACT CTTTATGTGC GACAACACGC TCAACGATTC GGATATCAAG 
TTCCTCCTGG AGGCGGGTGA AAACATTGAA AATGTCAAAA TCGATGAGAC GCTGTTCCAG 
GATATTGGCG AATTGGATTT GGATGACGAT GATGATGAGG ATTGGGTGCC CGGGGCGGAC 
GACGACGACG ATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_788731.1
CDS	244..978
Translation	MSRNYKEDQTNEVEALDSIYCGDMEILATEPHHKFQIPIATEEYSSEEPEKGLACKLVFTFTATYPDGAPVVEIEEPENFEDMFETRLLEHLQKTIEENLGMEMIFSLVSSAQEWLNERWDEHKFHQEELREQKLREIEEEERKKFEGTRVTVESFLKWKLEFEESTGIAAKREKNNVSKKQTGRELFMCDNTLNDSDIKFLLEAGENIENVKIDETLFQDIGELDLDDDDDEDWVPGADDDDD

Target ORF information:

RefSeq Version	NM_176554.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant B (CG5515), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_176554.2

ORF Insert Sequence:

ATGAGCCGCA ACTACAAGGA AGATCAGACC AACGAGGTCG AGGCGTTGGA CTCCATATAC 
TGTGGCGATA TGGAGATTCT CGCCACGGAG CCGCACCACA AATTCCAGAT TCCAATTGCC 
ACGGAGGAGT ACAGTTCGGA GGAGCCCGAG AAAGGTCTTG CCTGCAAACT GGTCTTCACA 
TTCACAGCTA CCTATCCGGA TGGAGCACCC GTGGTGGAAA TCGAGGAGCC AGAAAACTTT 
GAGGACATGT TTGAAACGCG CCTCCTGGAA CACCTGCAAA AGACAATTGA GGAGAACCTG 
GGCATGGAGA TGATCTTTTC GCTGGTAAGC AGCGCCCAGG AGTGGCTGAA CGAGCGGTGG 
GATGAACACA AGTTCCACCA GGAGGAACTG CGAGAGCAGA AGCTGCGGGA AATCGAAGAG 
GAGGAACGCA AGAAGTTTGA GGGCACCCGT GTGACGGTGG AGTCCTTCCT CAAATGGAAG 
CTCGAATTCG AGGAGAGCAC CGGCATTGCC GCCAAGCGGG AGAAGAACAA TGTGTCCAAG 
AAGCAGACCG GACGCGAACT CTTTATGTGC GACAACACGC TCAACGATTC GGATATCAAG 
TTCCTCCTGG AGGCGGGTGA AAACATTGAA AATGTCAAAA TCGATGAGAC GCTGTTCCAG 
GATATTGGCG AATTGGATTT GGATGACGAT GATGATGAGG ATTGGGTGCC CGGGGCGGAC 
GACGACGACG ATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CG5515 ( NM_001275972.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001262901.1 Drosophila melanogaster uncharacterized protein, transcript variant C (CG5515), mRNA.

Price & Availability↑

CloneID	OFa05910
Clone ID Related Accession (Same CDS sequence)	NM_176554.2 , NM_001275972.1 , NM_142970.3 , NM_001300570.1
Accession Version	NM_001275972.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 735bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform C
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAGCCGCA ACTACAAGGA AGATCAGACC AACGAGGTCG AGGCGTTGGA CTCCATATAC 
TGTGGCGATA TGGAGATTCT CGCCACGGAG CCGCACCACA AATTCCAGAT TCCAATTGCC 
ACGGAGGAGT ACAGTTCGGA GGAGCCCGAG AAAGGTCTTG CCTGCAAACT GGTCTTCACA 
TTCACAGCTA CCTATCCGGA TGGAGCACCC GTGGTGGAAA TCGAGGAGCC AGAAAACTTT 
GAGGACATGT TTGAAACGCG CCTCCTGGAA CACCTGCAAA AGACAATTGA GGAGAACCTG 
GGCATGGAGA TGATCTTTTC GCTGGTAAGC AGCGCCCAGG AGTGGCTGAA CGAGCGGTGG 
GATGAACACA AGTTCCACCA GGAGGAACTG CGAGAGCAGA AGCTGCGGGA AATCGAAGAG 
GAGGAACGCA AGAAGTTTGA GGGCACCCGT GTGACGGTGG AGTCCTTCCT CAAATGGAAG 
CTCGAATTCG AGGAGAGCAC CGGCATTGCC GCCAAGCGGG AGAAGAACAA TGTGTCCAAG 
AAGCAGACCG GACGCGAACT CTTTATGTGC GACAACACGC TCAACGATTC GGATATCAAG 
TTCCTCCTGG AGGCGGGTGA AAACATTGAA AATGTCAAAA TCGATGAGAC GCTGTTCCAG 
GATATTGGCG AATTGGATTT GGATGACGAT GATGATGAGG ATTGGGTGCC CGGGGCGGAC 
GACGACGACG ATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001262901.1
CDS	169..903
Translation	MSRNYKEDQTNEVEALDSIYCGDMEILATEPHHKFQIPIATEEYSSEEPEKGLACKLVFTFTATYPDGAPVVEIEEPENFEDMFETRLLEHLQKTIEENLGMEMIFSLVSSAQEWLNERWDEHKFHQEELREQKLREIEEEERKKFEGTRVTVESFLKWKLEFEESTGIAAKREKNNVSKKQTGRELFMCDNTLNDSDIKFLLEAGENIENVKIDETLFQDIGELDLDDDDDEDWVPGADDDDD

Target ORF information:

RefSeq Version	NM_001275972.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant C (CG5515), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001275972.1

ORF Insert Sequence:

ATGAGCCGCA ACTACAAGGA AGATCAGACC AACGAGGTCG AGGCGTTGGA CTCCATATAC 
TGTGGCGATA TGGAGATTCT CGCCACGGAG CCGCACCACA AATTCCAGAT TCCAATTGCC 
ACGGAGGAGT ACAGTTCGGA GGAGCCCGAG AAAGGTCTTG CCTGCAAACT GGTCTTCACA 
TTCACAGCTA CCTATCCGGA TGGAGCACCC GTGGTGGAAA TCGAGGAGCC AGAAAACTTT 
GAGGACATGT TTGAAACGCG CCTCCTGGAA CACCTGCAAA AGACAATTGA GGAGAACCTG 
GGCATGGAGA TGATCTTTTC GCTGGTAAGC AGCGCCCAGG AGTGGCTGAA CGAGCGGTGG 
GATGAACACA AGTTCCACCA GGAGGAACTG CGAGAGCAGA AGCTGCGGGA AATCGAAGAG 
GAGGAACGCA AGAAGTTTGA GGGCACCCGT GTGACGGTGG AGTCCTTCCT CAAATGGAAG 
CTCGAATTCG AGGAGAGCAC CGGCATTGCC GCCAAGCGGG AGAAGAACAA TGTGTCCAAG 
AAGCAGACCG GACGCGAACT CTTTATGTGC GACAACACGC TCAACGATTC GGATATCAAG 
TTCCTCCTGG AGGCGGGTGA AAACATTGAA AATGTCAAAA TCGATGAGAC GCTGTTCCAG 
GATATTGGCG AATTGGATTT GGATGACGAT GATGATGAGG ATTGGGTGCC CGGGGCGGAC 
GACGACGACG ATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CG5515 ( NM_142970.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_651227.2 Drosophila melanogaster uncharacterized protein, transcript variant A (CG5515), mRNA.

Price & Availability↑

CloneID	OFa05910
Clone ID Related Accession (Same CDS sequence)	NM_176554.2 , NM_001275972.1 , NM_142970.3 , NM_001300570.1
Accession Version	NM_142970.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 735bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jan 16, 2013 this sequence version replaced NM_142970.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAGCCGCA ACTACAAGGA AGATCAGACC AACGAGGTCG AGGCGTTGGA CTCCATATAC 
TGTGGCGATA TGGAGATTCT CGCCACGGAG CCGCACCACA AATTCCAGAT TCCAATTGCC 
ACGGAGGAGT ACAGTTCGGA GGAGCCCGAG AAAGGTCTTG CCTGCAAACT GGTCTTCACA 
TTCACAGCTA CCTATCCGGA TGGAGCACCC GTGGTGGAAA TCGAGGAGCC AGAAAACTTT 
GAGGACATGT TTGAAACGCG CCTCCTGGAA CACCTGCAAA AGACAATTGA GGAGAACCTG 
GGCATGGAGA TGATCTTTTC GCTGGTAAGC AGCGCCCAGG AGTGGCTGAA CGAGCGGTGG 
GATGAACACA AGTTCCACCA GGAGGAACTG CGAGAGCAGA AGCTGCGGGA AATCGAAGAG 
GAGGAACGCA AGAAGTTTGA GGGCACCCGT GTGACGGTGG AGTCCTTCCT CAAATGGAAG 
CTCGAATTCG AGGAGAGCAC CGGCATTGCC GCCAAGCGGG AGAAGAACAA TGTGTCCAAG 
AAGCAGACCG GACGCGAACT CTTTATGTGC GACAACACGC TCAACGATTC GGATATCAAG 
TTCCTCCTGG AGGCGGGTGA AAACATTGAA AATGTCAAAA TCGATGAGAC GCTGTTCCAG 
GATATTGGCG AATTGGATTT GGATGACGAT GATGATGAGG ATTGGGTGCC CGGGGCGGAC 
GACGACGACG ATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_651227.2
CDS	306..1040
Translation	MSRNYKEDQTNEVEALDSIYCGDMEILATEPHHKFQIPIATEEYSSEEPEKGLACKLVFTFTATYPDGAPVVEIEEPENFEDMFETRLLEHLQKTIEENLGMEMIFSLVSSAQEWLNERWDEHKFHQEELREQKLREIEEEERKKFEGTRVTVESFLKWKLEFEESTGIAAKREKNNVSKKQTGRELFMCDNTLNDSDIKFLLEAGENIENVKIDETLFQDIGELDLDDDDDEDWVPGADDDDD

Target ORF information:

RefSeq Version	NM_142970.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant A (CG5515), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_142970.3

ORF Insert Sequence:

ATGAGCCGCA ACTACAAGGA AGATCAGACC AACGAGGTCG AGGCGTTGGA CTCCATATAC 
TGTGGCGATA TGGAGATTCT CGCCACGGAG CCGCACCACA AATTCCAGAT TCCAATTGCC 
ACGGAGGAGT ACAGTTCGGA GGAGCCCGAG AAAGGTCTTG CCTGCAAACT GGTCTTCACA 
TTCACAGCTA CCTATCCGGA TGGAGCACCC GTGGTGGAAA TCGAGGAGCC AGAAAACTTT 
GAGGACATGT TTGAAACGCG CCTCCTGGAA CACCTGCAAA AGACAATTGA GGAGAACCTG 
GGCATGGAGA TGATCTTTTC GCTGGTAAGC AGCGCCCAGG AGTGGCTGAA CGAGCGGTGG 
GATGAACACA AGTTCCACCA GGAGGAACTG CGAGAGCAGA AGCTGCGGGA AATCGAAGAG 
GAGGAACGCA AGAAGTTTGA GGGCACCCGT GTGACGGTGG AGTCCTTCCT CAAATGGAAG 
CTCGAATTCG AGGAGAGCAC CGGCATTGCC GCCAAGCGGG AGAAGAACAA TGTGTCCAAG 
AAGCAGACCG GACGCGAACT CTTTATGTGC GACAACACGC TCAACGATTC GGATATCAAG 
TTCCTCCTGG AGGCGGGTGA AAACATTGAA AATGTCAAAA TCGATGAGAC GCTGTTCCAG 
GATATTGGCG AATTGGATTT GGATGACGAT GATGATGAGG ATTGGGTGCC CGGGGCGGAC 
GACGACGACG ATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CG5515 ( NM_001300570.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001287499.1 Drosophila melanogaster uncharacterized protein, transcript variant D (CG5515), mRNA.

Price & Availability↑

CloneID	OFa05910
Clone ID Related Accession (Same CDS sequence)	NM_176554.2 , NM_001275972.1 , NM_142970.3 , NM_001300570.1
Accession Version	NM_001300570.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 735bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform D
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAGCCGCA ACTACAAGGA AGATCAGACC AACGAGGTCG AGGCGTTGGA CTCCATATAC 
TGTGGCGATA TGGAGATTCT CGCCACGGAG CCGCACCACA AATTCCAGAT TCCAATTGCC 
ACGGAGGAGT ACAGTTCGGA GGAGCCCGAG AAAGGTCTTG CCTGCAAACT GGTCTTCACA 
TTCACAGCTA CCTATCCGGA TGGAGCACCC GTGGTGGAAA TCGAGGAGCC AGAAAACTTT 
GAGGACATGT TTGAAACGCG CCTCCTGGAA CACCTGCAAA AGACAATTGA GGAGAACCTG 
GGCATGGAGA TGATCTTTTC GCTGGTAAGC AGCGCCCAGG AGTGGCTGAA CGAGCGGTGG 
GATGAACACA AGTTCCACCA GGAGGAACTG CGAGAGCAGA AGCTGCGGGA AATCGAAGAG 
GAGGAACGCA AGAAGTTTGA GGGCACCCGT GTGACGGTGG AGTCCTTCCT CAAATGGAAG 
CTCGAATTCG AGGAGAGCAC CGGCATTGCC GCCAAGCGGG AGAAGAACAA TGTGTCCAAG 
AAGCAGACCG GACGCGAACT CTTTATGTGC GACAACACGC TCAACGATTC GGATATCAAG 
TTCCTCCTGG AGGCGGGTGA AAACATTGAA AATGTCAAAA TCGATGAGAC GCTGTTCCAG 
GATATTGGCG AATTGGATTT GGATGACGAT GATGATGAGG ATTGGGTGCC CGGGGCGGAC 
GACGACGACG ATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001287499.1
CDS	109..843
Translation	MSRNYKEDQTNEVEALDSIYCGDMEILATEPHHKFQIPIATEEYSSEEPEKGLACKLVFTFTATYPDGAPVVEIEEPENFEDMFETRLLEHLQKTIEENLGMEMIFSLVSSAQEWLNERWDEHKFHQEELREQKLREIEEEERKKFEGTRVTVESFLKWKLEFEESTGIAAKREKNNVSKKQTGRELFMCDNTLNDSDIKFLLEAGENIENVKIDETLFQDIGELDLDDDDDEDWVPGADDDDD

Target ORF information:

RefSeq Version	NM_001300570.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant D (CG5515), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001300570.1

ORF Insert Sequence:

ATGAGCCGCA ACTACAAGGA AGATCAGACC AACGAGGTCG AGGCGTTGGA CTCCATATAC 
TGTGGCGATA TGGAGATTCT CGCCACGGAG CCGCACCACA AATTCCAGAT TCCAATTGCC 
ACGGAGGAGT ACAGTTCGGA GGAGCCCGAG AAAGGTCTTG CCTGCAAACT GGTCTTCACA 
TTCACAGCTA CCTATCCGGA TGGAGCACCC GTGGTGGAAA TCGAGGAGCC AGAAAACTTT 
GAGGACATGT TTGAAACGCG CCTCCTGGAA CACCTGCAAA AGACAATTGA GGAGAACCTG 
GGCATGGAGA TGATCTTTTC GCTGGTAAGC AGCGCCCAGG AGTGGCTGAA CGAGCGGTGG 
GATGAACACA AGTTCCACCA GGAGGAACTG CGAGAGCAGA AGCTGCGGGA AATCGAAGAG 
GAGGAACGCA AGAAGTTTGA GGGCACCCGT GTGACGGTGG AGTCCTTCCT CAAATGGAAG 
CTCGAATTCG AGGAGAGCAC CGGCATTGCC GCCAAGCGGG AGAAGAACAA TGTGTCCAAG 
AAGCAGACCG GACGCGAACT CTTTATGTGC GACAACACGC TCAACGATTC GGATATCAAG 
TTCCTCCTGG AGGCGGGTGA AAACATTGAA AATGTCAAAA TCGATGAGAC GCTGTTCCAG 
GATATTGGCG AATTGGATTT GGATGACGAT GATGATGAGG ATTGGGTGCC CGGGGCGGAC 
GACGACGACG ATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG5515 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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