Rpn9 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	Rpn9
Entrez Gene ID	42802
Full Name	Regulatory particle non-ATPase 9
Synonyms	0718/06,718/06,CG10230,CT28749,Dmel\CG10230,PSMD13,Rpn4,Rpn94,S11,l(3)S071806,l(3)S071806b,p39A,rpn9
General protein information	Preferred Names Regulatory particle non-ATPase 9 Names CG10230 gene product from transcript CG10230-RB CG10230-PA CG10230-PB Rpn9-PA Rpn9-PB nobody p39A regulatory particle non-ATPase 9
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3R Map Location: 95B1-95B1

mRNA and Protein(s)

mRNA	Protein	Name
NM_170088.2	NP_732899.1	regulatory particle non-ATPase 9, isoform B
NM_142920.3	NP_651177.1	regulatory particle non-ATPase 9, isoform A

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	PSMD13	XP_848457.1
Mus musculus (house mouse)	Psmd13	NP_036005.1
Neurospora crassa	NCU02374	XP_959795.1
Oryza sativa (rice)	Os01g0511300	NP_001043172.1
Eremothecium gossypii	AGOS_ADR191C	NP_984287.1
Magnaporthe oryzae (rice blast fungus)	MGG_03524	XP_003716395.1
Gallus gallus (chicken)	PSMD13	XP_003641330.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP001651	XP_321445.2
Caenorhabditis elegans (roundworm)	rpn-9	NP_496405.1
Saccharomyces cerevisiae (baker's yeast)	RPN9	NP_010715.3
Schizosaccharomyces pombe (fission yeast)	rpn9	NP_593594.1
Arabidopsis thaliana (thale cress)	AT5G45620	NP_199375.2
Homo sapiens (human)	PSMD13	NP_002808.3
Danio rerio (zebrafish)	psmd13	NP_957242.1
Drosophila melanogaster (fruit fly)	Rpn9	NP_651177.1
Kluyveromyces lactis	KLLA0B00825g	XP_451567.1
Arabidopsis thaliana (thale cress)	AT4G19006	NP_680721.2
Pan troglodytes (chimpanzee)	PSMD13	XP_001144380.1
Bos taurus (cattle)	PSMD13	NP_001019703.1
Rattus norvegicus (Norway rat)	Psmd13	NP_001102395.1
Oryza sativa (rice)	Os03g0214600	NP_001049372.1
Xenopus tropicalis (tropical clawed frog)	psmd13	NP_001005429.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Rpn9 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Rpn9 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa05823	NM_170088.2 Latest version!	Drosophila melanogaster regulatory particle non-ATPase 9, transcript variant B (Rpn9), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
OFa05823	NM_142920.3 Latest version!	Drosophila melanogaster regulatory particle non-ATPase 9, transcript variant A (Rpn9), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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2-4 Clone	40% OFF
5 or more Clone	50% OFF
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Rpn9 ( NM_170088.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_732899.1 Drosophila melanogaster regulatory particle non-ATPase 9, transcript variant B (Rpn9), mRNA.

Price & Availability↑

CloneID	OFa05823
Clone ID Related Accession (Same CDS sequence)	NM_170088.2 , NM_142920.3
Accession Version	NM_170088.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1149bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	regulatory particle non-ATPase 9, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jan 16, 2013 this sequence version replaced NM_170088.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGTCCAATC CTCAGCCTAA TGTCACCGCC TATCTGGCGA CCCAGAAGAA GACCACCAAC 
AAAGAACTCG CCGCCGAATG GACGCTCATC GAGGAGCTCT ACAATGAAAA ACTCTGGAAT 
GAGCTGACCA TCAAACTGGT GACCTTTGTG CGCCACGAAT CCTTGCAGGA CGAAACTGCG 
CTGCTGCAGC TCTACCAGAA TTTCCTGTCC ACCTTCGAGA CCAAAATAAA CCCCTATGGC 
CTCATCCAGA TTCTCGAGGT GGTGGTTGAC AACATCGGTG ACAAGAAGGA GGCCATCGAG 
TTCTTGGAGA AGATGAAGGA CAAGGTGAAG ATCTGCGACG AGGCCGTTTG GTATCTGCAG 
GTGATGCAGG GTAATCTGTA CCTCAGCAAC CTGAACGATC TGAATGCCAC CAAGAAGATC 
ATCGAGGAAC TGCGTGATGT CCTAGAGGAA GCGGGTAATG TGACGCCCGT TCACGGCAAA 
TACTACATGC TGGCATCCCA GTATTATCGG CGAGTGGGCA AGCACAGCGA TTACTACCGA 
TGTGGCCTAC AGTTTCTGGG CTGCTCCATG GATGAGTACC CCCGTGATCA ATGGGCCCAG 
CAGGCATTCT TCTTGGGTCT GGCTGCTCTC TTGGGCGATG GTGTCTACAA CATAGGCGAA 
TTGCTGGCTC ATCCCATTCT TGAGTCGCTT AAGGGCACGG AAAATGAGTG GCTCATGGAA 
CTTCTTAAAG CCTTCAACAC GGGCGATATT AACAAGTTTA ATGACATGAA GAAAATCTGG 
TCCAAGATTC CCGATTTGGC TGCCCAGGAG GTCAAGTTGC GCCAGAAGAT CTCCCTCCTT 
TGCCTCATGG AGATGACCTT CAAGCGCTCA GCCATCGAGC GAGCCATCTC CTTTACCGAC 
ATCGCGCAAG AGACCAAACT GCCCGCCAAG GAAGTGGAAC TGCTTATCAT GAAGGCTCTG 
GCTTTGGATC TCGTCCGCGG CGAGATTGAC CAAGTGGCTG GAGTGGTTAA CATGTCGTGG 
GTGCAACCAC GCGTCCTCAA CCGCAGCCAG ATTGTCGGCA TGGCCAGCAC TCTGGACACA 
TGGATGGGCG CCATCACGAA CATGGAGAAA CTGATGGAGA ATCGTGCCGC CGAAATCCTC 
ACCAATTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_732899.1
CDS	217..1365
Translation	MSNPQPNVTAYLATQKKTTNKELAAEWTLIEELYNEKLWNELTIKLVTFVRHESLQDETALLQLYQNFLSTFETKINPYGLIQILEVVVDNIGDKKEAIEFLEKMKDKVKICDEAVWYLQVMQGNLYLSNLNDLNATKKIIEELRDVLEEAGNVTPVHGKYYMLASQYYRRVGKHSDYYRCGLQFLGCSMDEYPRDQWAQQAFFLGLAALLGDGVYNIGELLAHPILESLKGTENEWLMELLKAFNTGDINKFNDMKKIWSKIPDLAAQEVKLRQKISLLCLMEMTFKRSAIERAISFTDIAQETKLPAKEVELLIMKALALDLVRGEIDQVAGVVNMSWVQPRVLNRSQIVGMASTLDTWMGAITNMEKLMENRAAEILTN

Target ORF information:

RefSeq Version	NM_170088.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster regulatory particle non-ATPase 9, transcript variant B (Rpn9), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_170088.2

ORF Insert Sequence:

ATGTCCAATC CTCAGCCTAA TGTCACCGCC TATCTGGCGA CCCAGAAGAA GACCACCAAC 
AAAGAACTCG CCGCCGAATG GACGCTCATC GAGGAGCTCT ACAATGAAAA ACTCTGGAAT 
GAGCTGACCA TCAAACTGGT GACCTTTGTG CGCCACGAAT CCTTGCAGGA CGAAACTGCG 
CTGCTGCAGC TCTACCAGAA TTTCCTGTCC ACCTTCGAGA CCAAAATAAA CCCCTATGGC 
CTCATCCAGA TTCTCGAGGT GGTGGTTGAC AACATCGGTG ACAAGAAGGA GGCCATCGAG 
TTCTTGGAGA AGATGAAGGA CAAGGTGAAG ATCTGCGACG AGGCCGTTTG GTATCTGCAG 
GTGATGCAGG GTAATCTGTA CCTCAGCAAC CTGAACGATC TGAATGCCAC CAAGAAGATC 
ATCGAGGAAC TGCGTGATGT CCTAGAGGAA GCGGGTAATG TGACGCCCGT TCACGGCAAA 
TACTACATGC TGGCATCCCA GTATTATCGG CGAGTGGGCA AGCACAGCGA TTACTACCGA 
TGTGGCCTAC AGTTTCTGGG CTGCTCCATG GATGAGTACC CCCGTGATCA ATGGGCCCAG 
CAGGCATTCT TCTTGGGTCT GGCTGCTCTC TTGGGCGATG GTGTCTACAA CATAGGCGAA 
TTGCTGGCTC ATCCCATTCT TGAGTCGCTT AAGGGCACGG AAAATGAGTG GCTCATGGAA 
CTTCTTAAAG CCTTCAACAC GGGCGATATT AACAAGTTTA ATGACATGAA GAAAATCTGG 
TCCAAGATTC CCGATTTGGC TGCCCAGGAG GTCAAGTTGC GCCAGAAGAT CTCCCTCCTT 
TGCCTCATGG AGATGACCTT CAAGCGCTCA GCCATCGAGC GAGCCATCTC CTTTACCGAC 
ATCGCGCAAG AGACCAAACT GCCCGCCAAG GAAGTGGAAC TGCTTATCAT GAAGGCTCTG 
GCTTTGGATC TCGTCCGCGG CGAGATTGAC CAAGTGGCTG GAGTGGTTAA CATGTCGTGG 
GTGCAACCAC GCGTCCTCAA CCGCAGCCAG ATTGTCGGCA TGGCCAGCAC TCTGGACACA 
TGGATGGGCG CCATCACGAA CATGGAGAAA CTGATGGAGA ATCGTGCCGC CGAAATCCTC 
ACCAATTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Rpn9 ( NM_142920.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_651177.1 Drosophila melanogaster regulatory particle non-ATPase 9, transcript variant A (Rpn9), mRNA.

Price & Availability↑

CloneID	OFa05823
Clone ID Related Accession (Same CDS sequence)	NM_170088.2 , NM_142920.3
Accession Version	NM_142920.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1149bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	regulatory particle non-ATPase 9, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jan 16, 2013 this sequence version replaced NM_142920.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGTCCAATC CTCAGCCTAA TGTCACCGCC TATCTGGCGA CCCAGAAGAA GACCACCAAC 
AAAGAACTCG CCGCCGAATG GACGCTCATC GAGGAGCTCT ACAATGAAAA ACTCTGGAAT 
GAGCTGACCA TCAAACTGGT GACCTTTGTG CGCCACGAAT CCTTGCAGGA CGAAACTGCG 
CTGCTGCAGC TCTACCAGAA TTTCCTGTCC ACCTTCGAGA CCAAAATAAA CCCCTATGGC 
CTCATCCAGA TTCTCGAGGT GGTGGTTGAC AACATCGGTG ACAAGAAGGA GGCCATCGAG 
TTCTTGGAGA AGATGAAGGA CAAGGTGAAG ATCTGCGACG AGGCCGTTTG GTATCTGCAG 
GTGATGCAGG GTAATCTGTA CCTCAGCAAC CTGAACGATC TGAATGCCAC CAAGAAGATC 
ATCGAGGAAC TGCGTGATGT CCTAGAGGAA GCGGGTAATG TGACGCCCGT TCACGGCAAA 
TACTACATGC TGGCATCCCA GTATTATCGG CGAGTGGGCA AGCACAGCGA TTACTACCGA 
TGTGGCCTAC AGTTTCTGGG CTGCTCCATG GATGAGTACC CCCGTGATCA ATGGGCCCAG 
CAGGCATTCT TCTTGGGTCT GGCTGCTCTC TTGGGCGATG GTGTCTACAA CATAGGCGAA 
TTGCTGGCTC ATCCCATTCT TGAGTCGCTT AAGGGCACGG AAAATGAGTG GCTCATGGAA 
CTTCTTAAAG CCTTCAACAC GGGCGATATT AACAAGTTTA ATGACATGAA GAAAATCTGG 
TCCAAGATTC CCGATTTGGC TGCCCAGGAG GTCAAGTTGC GCCAGAAGAT CTCCCTCCTT 
TGCCTCATGG AGATGACCTT CAAGCGCTCA GCCATCGAGC GAGCCATCTC CTTTACCGAC 
ATCGCGCAAG AGACCAAACT GCCCGCCAAG GAAGTGGAAC TGCTTATCAT GAAGGCTCTG 
GCTTTGGATC TCGTCCGCGG CGAGATTGAC CAAGTGGCTG GAGTGGTTAA CATGTCGTGG 
GTGCAACCAC GCGTCCTCAA CCGCAGCCAG ATTGTCGGCA TGGCCAGCAC TCTGGACACA 
TGGATGGGCG CCATCACGAA CATGGAGAAA CTGATGGAGA ATCGTGCCGC CGAAATCCTC 
ACCAATTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_651177.1
CDS	107..1255
Translation	MSNPQPNVTAYLATQKKTTNKELAAEWTLIEELYNEKLWNELTIKLVTFVRHESLQDETALLQLYQNFLSTFETKINPYGLIQILEVVVDNIGDKKEAIEFLEKMKDKVKICDEAVWYLQVMQGNLYLSNLNDLNATKKIIEELRDVLEEAGNVTPVHGKYYMLASQYYRRVGKHSDYYRCGLQFLGCSMDEYPRDQWAQQAFFLGLAALLGDGVYNIGELLAHPILESLKGTENEWLMELLKAFNTGDINKFNDMKKIWSKIPDLAAQEVKLRQKISLLCLMEMTFKRSAIERAISFTDIAQETKLPAKEVELLIMKALALDLVRGEIDQVAGVVNMSWVQPRVLNRSQIVGMASTLDTWMGAITNMEKLMENRAAEILTN

Target ORF information:

RefSeq Version	NM_142920.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster regulatory particle non-ATPase 9, transcript variant A (Rpn9), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_142920.3

ORF Insert Sequence:

ATGTCCAATC CTCAGCCTAA TGTCACCGCC TATCTGGCGA CCCAGAAGAA GACCACCAAC 
AAAGAACTCG CCGCCGAATG GACGCTCATC GAGGAGCTCT ACAATGAAAA ACTCTGGAAT 
GAGCTGACCA TCAAACTGGT GACCTTTGTG CGCCACGAAT CCTTGCAGGA CGAAACTGCG 
CTGCTGCAGC TCTACCAGAA TTTCCTGTCC ACCTTCGAGA CCAAAATAAA CCCCTATGGC 
CTCATCCAGA TTCTCGAGGT GGTGGTTGAC AACATCGGTG ACAAGAAGGA GGCCATCGAG 
TTCTTGGAGA AGATGAAGGA CAAGGTGAAG ATCTGCGACG AGGCCGTTTG GTATCTGCAG 
GTGATGCAGG GTAATCTGTA CCTCAGCAAC CTGAACGATC TGAATGCCAC CAAGAAGATC 
ATCGAGGAAC TGCGTGATGT CCTAGAGGAA GCGGGTAATG TGACGCCCGT TCACGGCAAA 
TACTACATGC TGGCATCCCA GTATTATCGG CGAGTGGGCA AGCACAGCGA TTACTACCGA 
TGTGGCCTAC AGTTTCTGGG CTGCTCCATG GATGAGTACC CCCGTGATCA ATGGGCCCAG 
CAGGCATTCT TCTTGGGTCT GGCTGCTCTC TTGGGCGATG GTGTCTACAA CATAGGCGAA 
TTGCTGGCTC ATCCCATTCT TGAGTCGCTT AAGGGCACGG AAAATGAGTG GCTCATGGAA 
CTTCTTAAAG CCTTCAACAC GGGCGATATT AACAAGTTTA ATGACATGAA GAAAATCTGG 
TCCAAGATTC CCGATTTGGC TGCCCAGGAG GTCAAGTTGC GCCAGAAGAT CTCCCTCCTT 
TGCCTCATGG AGATGACCTT CAAGCGCTCA GCCATCGAGC GAGCCATCTC CTTTACCGAC 
ATCGCGCAAG AGACCAAACT GCCCGCCAAG GAAGTGGAAC TGCTTATCAT GAAGGCTCTG 
GCTTTGGATC TCGTCCGCGG CGAGATTGAC CAAGTGGCTG GAGTGGTTAA CATGTCGTGG 
GTGCAACCAC GCGTCCTCAA CCGCAGCCAG ATTGTCGGCA TGGCCAGCAC TCTGGACACA 
TGGATGGGCG CCATCACGAA CATGGAGAAA CTGATGGAGA ATCGTGCCGC CGAAATCCTC 
ACCAATTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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Rpn9 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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