CG16953 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG16953
Entrez Gene ID	42437
Full Name	CG16953 gene product from transcript CG16953-RB
Synonyms	Dmel\CG16953
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3R Map Location: 92F2-92F2

mRNA and Protein(s)

mRNA	Protein	Name
NM_142640.4	NP_650897.3	uncharacterized protein

Pathways from BioSystems

Homologies

Drosophila melanogaster (fruit fly)	CG16953	NP_650897.3
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP001873	XP_321192.5

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG16953 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG16953 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa05488	NM_142640.4 Latest version!	Drosophila melanogaster uncharacterized protein (CG16953), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$342.30 $489.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG16953 ( NM_142640.4 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_650897.3 Drosophila melanogaster uncharacterized protein (CG16953), mRNA.

Price & Availability↑

CloneID	OFa05488
Clone ID Related Accession (Same CDS sequence)	NM_142640.4
Accession Version	NM_142640.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1722bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jan 16, 2013 this sequence version replaced NM_142640.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCCAATCG GCATGACGAA CATGTCGCCA GCAGCGTCAT CACTGGTTTT CCTCGCTCTT 
CTGCAGACAG TTACCTGCTA CACCGTCATC ATCACTGCTC CCGAACAGGC CCTCATCGGA 
TCCACCATCA ATGTGTCCGC CCAGCTCTTC GATGGCGACA AACCGGCTGA CGGAGGCAGG 
CCCTACAGGT TCACATGGTC CGACAGTGCT GGCCATCGAA AGGTGATTGA AACGAACAGC 
GTTAGCAGCA ATTGGTCTGT GGTCTTCACG CAAGAACAAC CGGCGACGCA TGTCATCAAG 
GTGGAAGTGG AGAAGTTCGT CACATTTTTT TGGGTGACGG AGGCTAAGGC CTCGAGGGGA 
ATCAAGCTGG ACAGCTTGCT CGGCGGCAGC CTGGAGCTGA TTCAGAACAA TGTGATGCGA 
CCCCATGAGT TTGTGTCCAC CCAGGAGGCG GTGAATCACA GCGTATCACT TTCCGATGCG 
GACCTACTTT TTCTGCAGTC GAAGGGTTAT CGCATTCTGA CGTATTGGTT TCAGAACTGC 
ACATATCTCG GCATGTCCAG TGCGTTGGAC TATGTGGCCA CATATCCGAA AGCTGAGCAA 
TATTATGACA TGGAGGCGTT AGTGGTGGCT TCACTGGAAC TTCCGCCGGA GCCGACGCCC 
TCAACTACGA CGACCACCAC CACAACAACC ACAACTACCA CTACCACCAC CACTACAACT 
CCAGCAACAA CAACCACTTC AACAACACCT GCCACAACGA CCACTCCAAA AACCACAACA 
TCATCCACAA GTACAACGAC CACAACGACT CCAAAGCCGC CGGCACGATC CAAACGTGAC 
TTAATCCAGG CCATGCATGC CAACGCTGCT CTTCTAGGCT TGAACTTAAC CAGTGCGCTA 
AACCAGCAAA AGTCATCCGC TGGGAATGTG TCCGTGGCTT TGGTCAATCC GCTGGGAGTG 
CGAAGGGTGT CCAAGCTCAC ACTGGTGCCC GGTCTGCAGC CGCCTTTCGA TTGCGTGAGC 
AAAAAGTTCG TCGCCCAGGA CCCCAAGCAG ATATACGGCT ACTACCAGCA TCGCGTTGTA 
TCCAAGGATC CTATAACCGG TTTCGGCACC ACGGGCAAGA ATTGGTTGCA ACACTGGGAG 
GTGCTTAAAC TCAATGTCAA CTGCAAAGGA TCGCCGCCGT TTGAGCTTTG CACTCGAGTC 
TTCACTGCTC CTTACAACTC CACGGGCAAT GAGACCTGCG ATCAGTATGA GCCGATAGAG 
ACGTGCTCGT ATGAGTATAT GCGTTACTTC AGTGAAAGCA AGACCATTCT GTTCTTCATA 
CGCAACGAGG TCTCCCAAAC ACTTAATCAG GTCACCATAA ACATGTATGA AGCTCAGCGT 
CAATCTCAGC TTTCGGTTGT AGTTGTGCCC GTAAGCTGCA CTTTGGTGGC GGTGATTCTT 
GTTGTTTTCG GCGTGGCCTA CTATATTCAA CGGGGAAATC GCTTCAATGT TGAAGTGGCC 
GATTTCAACT TCGGCGACAC ACAATCGGTG GACATGGAGT ACAAGACATT CCCGCAGCGC 
CTAATCGATA GCATCCGCGA TGCGTGCACG TGGCCGGGTC AGCGGCGTCA CTCGCAGTCC 
AGCGTAGATC TCATGGCGGA CCAGGACCAG CCGCCCAGTC CGAGCTTTGC AGGCAATGTG 
GGCGATGTAG ACAGCAACCT GCGCTACAAC ACTTTCAACT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_650897.3
CDS	362..2083
Translation	MPIGMTNMSPAASSLVFLALLQTVTCYTVIITAPEQALIGSTINVSAQLFDGDKPADGGRPYRFTWSDSAGHRKVIETNSVSSNWSVVFTQEQPATHVIKVEVEKFVTFFWVTEAKASRGIKLDSLLGGSLELIQNNVMRPHEFVSTQEAVNHSVSLSDADLLFLQSKGYRILTYWFQNCTYLGMSSALDYVATYPKAEQYYDMEALVVASLELPPEPTPSTTTTTTTTTTTTTTTTTTTPATTTTSTTPATTTTPKTTTSSTSTTTTTTPKPPARSKRDLIQAMHANAALLGLNLTSALNQQKSSAGNVSVALVNPLGVRRVSKLTLVPGLQPPFDCVSKKFVAQDPKQIYGYYQHRVVSKDPITGFGTTGKNWLQHWEVLKLNVNCKGSPPFELCTRVFTAPYNSTGNETCDQYEPIETCSYEYMRYFSESKTILFFIRNEVSQTLNQVTINMYEAQRQSQLSVVVVPVSCTLVAVILVVFGVAYYIQRGNRFNVEVADFNFGDTQSVDMEYKTFPQRLIDSIRDACTWPGQRRHSQSSVDLMADQDQPPSPSFAGNVGDVDSNLRYNTFN

Target ORF information:

RefSeq Version	NM_142640.4
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein (CG16953), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_142640.4

ORF Insert Sequence:

ATGCCAATCG GCATGACGAA CATGTCGCCA GCAGCGTCAT CACTGGTTTT CCTCGCTCTT 
CTGCAGACAG TTACCTGCTA CACCGTCATC ATCACTGCTC CCGAACAGGC CCTCATCGGA 
TCCACCATCA ATGTGTCCGC CCAGCTCTTC GATGGCGACA AACCGGCTGA CGGAGGCAGG 
CCCTACAGGT TCACATGGTC CGACAGTGCT GGCCATCGAA AGGTGATTGA AACGAACAGC 
GTTAGCAGCA ATTGGTCTGT GGTCTTCACG CAAGAACAAC CGGCGACGCA TGTCATCAAG 
GTGGAAGTGG AGAAGTTCGT CACATTTTTT TGGGTGACGG AGGCTAAGGC CTCGAGGGGA 
ATCAAGCTGG ACAGCTTGCT CGGCGGCAGC CTGGAGCTGA TTCAGAACAA TGTGATGCGA 
CCCCATGAGT TTGTGTCCAC CCAGGAGGCG GTGAATCACA GCGTATCACT TTCCGATGCG 
GACCTACTTT TTCTGCAGTC GAAGGGTTAT CGCATTCTGA CGTATTGGTT TCAGAACTGC 
ACATATCTCG GCATGTCCAG TGCGTTGGAC TATGTGGCCA CATATCCGAA AGCTGAGCAA 
TATTATGACA TGGAGGCGTT AGTGGTGGCT TCACTGGAAC TTCCGCCGGA GCCGACGCCC 
TCAACTACGA CGACCACCAC CACAACAACC ACAACTACCA CTACCACCAC CACTACAACT 
CCAGCAACAA CAACCACTTC AACAACACCT GCCACAACGA CCACTCCAAA AACCACAACA 
TCATCCACAA GTACAACGAC CACAACGACT CCAAAGCCGC CGGCACGATC CAAACGTGAC 
TTAATCCAGG CCATGCATGC CAACGCTGCT CTTCTAGGCT TGAACTTAAC CAGTGCGCTA 
AACCAGCAAA AGTCATCCGC TGGGAATGTG TCCGTGGCTT TGGTCAATCC GCTGGGAGTG 
CGAAGGGTGT CCAAGCTCAC ACTGGTGCCC GGTCTGCAGC CGCCTTTCGA TTGCGTGAGC 
AAAAAGTTCG TCGCCCAGGA CCCCAAGCAG ATATACGGCT ACTACCAGCA TCGCGTTGTA 
TCCAAGGATC CTATAACCGG TTTCGGCACC ACGGGCAAGA ATTGGTTGCA ACACTGGGAG 
GTGCTTAAAC TCAATGTCAA CTGCAAAGGA TCGCCGCCGT TTGAGCTTTG CACTCGAGTC 
TTCACTGCTC CTTACAACTC CACGGGCAAT GAGACCTGCG ATCAGTATGA GCCGATAGAG 
ACGTGCTCGT ATGAGTATAT GCGTTACTTC AGTGAAAGCA AGACCATTCT GTTCTTCATA 
CGCAACGAGG TCTCCCAAAC ACTTAATCAG GTCACCATAA ACATGTATGA AGCTCAGCGT 
CAATCTCAGC TTTCGGTTGT AGTTGTGCCC GTAAGCTGCA CTTTGGTGGC GGTGATTCTT 
GTTGTTTTCG GCGTGGCCTA CTATATTCAA CGGGGAAATC GCTTCAATGT TGAAGTGGCC 
GATTTCAACT TCGGCGACAC ACAATCGGTG GACATGGAGT ACAAGACATT CCCGCAGCGC 
CTAATCGATA GCATCCGCGA TGCGTGCACG TGGCCGGGTC AGCGGCGTCA CTCGCAGTCC 
AGCGTAGATC TCATGGCGGA CCAGGACCAG CCGCCCAGTC CGAGCTTTGC AGGCAATGTG 
GGCGATGTAG ACAGCAACCT GCGCTACAAC ACTTTCAACT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG16953 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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