CG3942 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG3942
Entrez Gene ID	41489
Full Name	CG3942 gene product from transcript CG3942-RA
Synonyms	Dmel\CG3942
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3R Map Location: 87B4-87B4

mRNA and Protein(s)

mRNA	Protein	Name
NM_141914.2	NP_650171.2	uncharacterized protein

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	GPCPD1	XP_514503.2
Canis lupus familiaris (dog)	GPCPD1	XP_542901.2
Oryza sativa (rice)	Os08g0535700	NP_001062357.1
Xenopus tropicalis (tropical clawed frog)	gpcpd1	NP_001135617.1
Homo sapiens (human)	GPCPD1	NP_062539.1
	GPCPD1	XP_002798259.1
Bos taurus (cattle)	GPCPD1	XP_002692410.1
Rattus norvegicus (Norway rat)	Gpcpd1	NP_942074.1
Gallus gallus (chicken)	GPCPD1	XP_419376.3
Danio rerio (zebrafish)	gpcpd1	NP_001103993.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP009843	XP_553723.1
Mus musculus (house mouse)	Gpcpd1	NP_001036136.1
Drosophila melanogaster (fruit fly)	CG2818	NP_608804.1
Drosophila melanogaster (fruit fly)	CG3942	NP_650171.2

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG3942 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG3942 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa04656	NM_141914.2 Latest version!	Drosophila melanogaster uncharacterized protein (CG3942), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG3942 ( NM_141914.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_650171.2 Drosophila melanogaster uncharacterized protein (CG3942), mRNA.

Price & Availability↑

CloneID	OFa04656
Clone ID Related Accession (Same CDS sequence)	NM_141914.2
Accession Version	NM_141914.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2220bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Nov 6, 2002 this sequence version replaced NM_141914.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCATCGAT GGTTCTTTGC CAACGAGCGG GAGGAGTGTG AGCGAAAACC GGAGGAAGAC 
GGTCCTAGTA GCGCTTCGGA GACACAAGAG CCACCACCTC CACCACCAGT TCCGACTACT 
GAGTGGCCCT TCTGTGTAGT CTTTCACAGT TCACTAAACG GTAATGAGTA TGTTGCCATT 
AGTGGCAACT GTCCCTCTCT TGGAAACTGG GATCCCAAGG AGGTGTACAT TTTGGCCAAG 
AATGACTGCA TTAGCTGCCT ATGCAATTGC CGTCAGTTTG AGGCAAGCTT AGAGATACCG 
CGTAACATCG ACATCCACTA TCGGTACTGC GTCGTGATCC ACGATCCCGA GACGGATGAG 
GTGTATATAC GCTTCTGGGA GTCCCAATTA TATCCCAGAG TGATTCGAAC TTGTCAGAAC 
ATGCTGAAGA ACTGCGACGT CTTTGGAAAA CCACACGACG ATGATGAAGC GAACCAGGTG 
GATCGCGGCT GGGCCACCAC AGAGACAATT GTGCACCTGA AGATCTTCAA TGCTCCATTC 
TGTTGGCAAC GTCAGAAACC GAGGCTCCTG TATGTCCATG TGCAGCCCAT GTTTGAGGTG 
CCGGAGAATC CTTGTAACGA ACCAGCCAAT CCCATCAAAA TGGTTTCGTC GCAAACACGT 
TTATCGCGTT ATCTGAGCAC CCGGGAAATT AAGGCAGGGA ACCAGTATCT TCAATTGGCA 
CAAGTCGAGG TGACCAATCT ATGTGTCCAA AATGCTTTGG CCGCGCAGCA ACGATTTGGA 
GCCAGATGTG GGCCGAAGGA TATGGAGCTA TTTCATTGTT CCATCGCTTT TCCGGAGGAA 
ACGCTCTACC GACTGGATTT GTACACATAC GCGCATAAAG CAGGCTATGA TGAACCACCG 
TATCATTACG GGTACGGATT CCTGATGCCA GATCAGCTGC TGGGCACCGA AGGCTCTGCC 
CGGGTGAAGA TCACTTGCGC CTCCACCCAC CGTCCACTAA TGGAGATGTG TGTACGCTAT 
CTAATAATTC GACCTTTGCC AAATTTCCGT TGCGATTTGA GCCACAGCTA CGAGCGTTAC 
TGGCGCAAAA ATCGCCTATG CATGAACATC GGGCACAAAG GATCGGGAAA TACGTACCGG 
TTAGGATCCG ATGTGGTAAG GGAGAATACC TTGTATGGTT TCAAGCAGGC TGTTTTGGCC 
AATGCAGACA TGGTGGAGAT GGATGTCCAG CTCACGCAGG ATGCCCAGGT GGTGGTGTAT 
CACGATTTTG TACTGCGATT TATGTTGCAG AGAATGCCTA GTTTTGAGGA TCTTCTGGAG 
AATCAGGATC TGCTGATATT TGCCTACGAA AATCTTAACA AACTAATGCT CCTCGCTATG 
GGAGGATCAA AACGAAAAGA CCTCATTGCC GTTCCCCTGG AGGCATTTTC CTACGATCAA 
CTGAAGGAGG TGAAGGTCCT GCGATTCGCT GGCAGCAAAG GCTGCGATAA GTCCTGTGAT 
CGAATGCTGC TGGAGCAGCG CCCCTTTCCC CTGCTCCTCG ACCTCCTGGA TGAGGAAAAT 
CTACCCGTCG ACATGGGCTT CCTAATCGAG ATCAAGTGGC CGCAGATGAC CAATATGCGG 
CGTTGGGAGA GCGGCAGCTT TAAGCCCACG TTCGATCGAA ACTTCTATGT GGACACCATA 
TTGGAGATTG TTTTAAATAA GGCTGGAAAG AGGCGCATAG TCTTTTGCAG CTTCGATGCC 
GACATCTGTG CCATGGTTCG GTTTAAGCAG AATGTATATC CCGTGACTTT ACTACTGGAG 
GATCCGCACT CGCCGGTTCA GTATGCAGAC CAAAGGGTAA GCGTGCAGGA TGTTGCCGTG 
AGGTTTTGCA ACAGTCTGGA GTTCCTTGGG CTGACCCTTC ATGCTAACTC ACTGCTGAAC 
AAGCCCTCGA CTATGGCATA CCTGCACCAG ATCAATCTGG ACGCTTTTGT TTATGGTAGT 
TCCACCATTG ACCTGGAGAT CCGCAATAAG CTAAAGAAGC ACGGAGTGCT GGGAATAATC 
TACGATCGTC TCGACCAACT GGACCAAGTG GGCGAAGAGC TGGAGGGGGA CACCATGTGC 
ACCATTGATT CAGTGACCAC AAGGCGCGTG ATCCAGGAGA CGGAGGTGGA GGAGTGGATC 
CAGAAGTGTG GCTACAAGCC GGAAACTTCC ATCGTCGTAC ATAACATTTA CATCGACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_650171.2
CDS	121..2340
Translation	MHRWFFANEREECERKPEEDGPSSASETQEPPPPPPVPTTEWPFCVVFHSSLNGNEYVAISGNCPSLGNWDPKEVYILAKNDCISCLCNCRQFEASLEIPRNIDIHYRYCVVIHDPETDEVYIRFWESQLYPRVIRTCQNMLKNCDVFGKPHDDDEANQVDRGWATTETIVHLKIFNAPFCWQRQKPRLLYVHVQPMFEVPENPCNEPANPIKMVSSQTRLSRYLSTREIKAGNQYLQLAQVEVTNLCVQNALAAQQRFGARCGPKDMELFHCSIAFPEETLYRLDLYTYAHKAGYDEPPYHYGYGFLMPDQLLGTEGSARVKITCASTHRPLMEMCVRYLIIRPLPNFRCDLSHSYERYWRKNRLCMNIGHKGSGNTYRLGSDVVRENTLYGFKQAVLANADMVEMDVQLTQDAQVVVYHDFVLRFMLQRMPSFEDLLENQDLLIFAYENLNKLMLLAMGGSKRKDLIAVPLEAFSYDQLKEVKVLRFAGSKGCDKSCDRMLLEQRPFPLLLDLLDEENLPVDMGFLIEIKWPQMTNMRRWESGSFKPTFDRNFYVDTILEIVLNKAGKRRIVFCSFDADICAMVRFKQNVYPVTLLLEDPHSPVQYADQRVSVQDVAVRFCNSLEFLGLTLHANSLLNKPSTMAYLHQINLDAFVYGSSTIDLEIRNKLKKHGVLGIIYDRLDQLDQVGEELEGDTMCTIDSVTTRRVIQETEVEEWIQKCGYKPETSIVVHNIYID

Target ORF information:

RefSeq Version	NM_141914.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein (CG3942), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_141914.2

ORF Insert Sequence:

ATGCATCGAT GGTTCTTTGC CAACGAGCGG GAGGAGTGTG AGCGAAAACC GGAGGAAGAC 
GGTCCTAGTA GCGCTTCGGA GACACAAGAG CCACCACCTC CACCACCAGT TCCGACTACT 
GAGTGGCCCT TCTGTGTAGT CTTTCACAGT TCACTAAACG GTAATGAGTA TGTTGCCATT 
AGTGGCAACT GTCCCTCTCT TGGAAACTGG GATCCCAAGG AGGTGTACAT TTTGGCCAAG 
AATGACTGCA TTAGCTGCCT ATGCAATTGC CGTCAGTTTG AGGCAAGCTT AGAGATACCG 
CGTAACATCG ACATCCACTA TCGGTACTGC GTCGTGATCC ACGATCCCGA GACGGATGAG 
GTGTATATAC GCTTCTGGGA GTCCCAATTA TATCCCAGAG TGATTCGAAC TTGTCAGAAC 
ATGCTGAAGA ACTGCGACGT CTTTGGAAAA CCACACGACG ATGATGAAGC GAACCAGGTG 
GATCGCGGCT GGGCCACCAC AGAGACAATT GTGCACCTGA AGATCTTCAA TGCTCCATTC 
TGTTGGCAAC GTCAGAAACC GAGGCTCCTG TATGTCCATG TGCAGCCCAT GTTTGAGGTG 
CCGGAGAATC CTTGTAACGA ACCAGCCAAT CCCATCAAAA TGGTTTCGTC GCAAACACGT 
TTATCGCGTT ATCTGAGCAC CCGGGAAATT AAGGCAGGGA ACCAGTATCT TCAATTGGCA 
CAAGTCGAGG TGACCAATCT ATGTGTCCAA AATGCTTTGG CCGCGCAGCA ACGATTTGGA 
GCCAGATGTG GGCCGAAGGA TATGGAGCTA TTTCATTGTT CCATCGCTTT TCCGGAGGAA 
ACGCTCTACC GACTGGATTT GTACACATAC GCGCATAAAG CAGGCTATGA TGAACCACCG 
TATCATTACG GGTACGGATT CCTGATGCCA GATCAGCTGC TGGGCACCGA AGGCTCTGCC 
CGGGTGAAGA TCACTTGCGC CTCCACCCAC CGTCCACTAA TGGAGATGTG TGTACGCTAT 
CTAATAATTC GACCTTTGCC AAATTTCCGT TGCGATTTGA GCCACAGCTA CGAGCGTTAC 
TGGCGCAAAA ATCGCCTATG CATGAACATC GGGCACAAAG GATCGGGAAA TACGTACCGG 
TTAGGATCCG ATGTGGTAAG GGAGAATACC TTGTATGGTT TCAAGCAGGC TGTTTTGGCC 
AATGCAGACA TGGTGGAGAT GGATGTCCAG CTCACGCAGG ATGCCCAGGT GGTGGTGTAT 
CACGATTTTG TACTGCGATT TATGTTGCAG AGAATGCCTA GTTTTGAGGA TCTTCTGGAG 
AATCAGGATC TGCTGATATT TGCCTACGAA AATCTTAACA AACTAATGCT CCTCGCTATG 
GGAGGATCAA AACGAAAAGA CCTCATTGCC GTTCCCCTGG AGGCATTTTC CTACGATCAA 
CTGAAGGAGG TGAAGGTCCT GCGATTCGCT GGCAGCAAAG GCTGCGATAA GTCCTGTGAT 
CGAATGCTGC TGGAGCAGCG CCCCTTTCCC CTGCTCCTCG ACCTCCTGGA TGAGGAAAAT 
CTACCCGTCG ACATGGGCTT CCTAATCGAG ATCAAGTGGC CGCAGATGAC CAATATGCGG 
CGTTGGGAGA GCGGCAGCTT TAAGCCCACG TTCGATCGAA ACTTCTATGT GGACACCATA 
TTGGAGATTG TTTTAAATAA GGCTGGAAAG AGGCGCATAG TCTTTTGCAG CTTCGATGCC 
GACATCTGTG CCATGGTTCG GTTTAAGCAG AATGTATATC CCGTGACTTT ACTACTGGAG 
GATCCGCACT CGCCGGTTCA GTATGCAGAC CAAAGGGTAA GCGTGCAGGA TGTTGCCGTG 
AGGTTTTGCA ACAGTCTGGA GTTCCTTGGG CTGACCCTTC ATGCTAACTC ACTGCTGAAC 
AAGCCCTCGA CTATGGCATA CCTGCACCAG ATCAATCTGG ACGCTTTTGT TTATGGTAGT 
TCCACCATTG ACCTGGAGAT CCGCAATAAG CTAAAGAAGC ACGGAGTGCT GGGAATAATC 
TACGATCGTC TCGACCAACT GGACCAAGTG GGCGAAGAGC TGGAGGGGGA CACCATGTGC 
ACCATTGATT CAGTGACCAC AAGGCGCGTG ATCCAGGAGA CGGAGGTGGA GGAGTGGATC 
CAGAAGTGTG GCTACAAGCC GGAAACTTCC ATCGTCGTAC ATAACATTTA CATCGACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG3942 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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