CG6962 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG6962
Entrez Gene ID	41436
Full Name	CG6962 gene product from transcript CG6962-RA
Synonyms	Dmel\CG6962
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3R Map Location: 87A1-87A1

mRNA and Protein(s)

mRNA	Protein	Name
NM_141867.4	NP_650124.1	uncharacterized protein

Pathways from BioSystems

Homologies

Bos taurus (cattle)	SMPD4	NP_001192531.1
	SMPD4	XP_002799472.1
Canis lupus familiaris (dog)	SMPD4	XP_543560.3
Danio rerio (zebrafish)	smpd4	NP_998520.1
Xenopus tropicalis (tropical clawed frog)	smpd4	NP_001106627.1
Pan troglodytes (chimpanzee)	SMPD4	XP_003954576.1
Mus musculus (house mouse)	Smpd4	NP_084221.2
Rattus norvegicus (Norway rat)	Smpd4	NP_001161278.1
Homo sapiens (human)	SMPD4	NP_060421.2
Gallus gallus (chicken)	SMPD4	XP_415236.3
Drosophila melanogaster (fruit fly)	CG6962	NP_650124.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP000405	XP_310695.4

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG6962 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG6962 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa04594	NM_141867.4 Latest version!	Drosophila melanogaster uncharacterized protein (CG6962), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG6962 ( NM_141867.4 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_650124.1 Drosophila melanogaster uncharacterized protein (CG6962), mRNA.

Price & Availability↑

CloneID	OFa04594
Clone ID Related Accession (Same CDS sequence)	NM_141867.4
Accession Version	NM_141867.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2304bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jul 15, 2014 this sequence version replaced NM_141867.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGTCGCAGA CCATGCCGCC AGAAAACCTA AGCAGCCGCC TGTTGACGGT GCTCAGTTTG 
CCTCTATTCG AGCGCGTGCA CGAGCTGAGC ATCCTGTTCG ATCGGTGCTC CTTGCGCCAA 
GTGCAGGAGA TCTTCCCCCA CGTTGTGCAC TCCATCTTCG GGATAGATGG CAATCCGTTG 
GGCTGGGGCC TGCGGACCAC GACGCTTGAA AACAATCCGG TGCAATTCCA AACGCTGCAC 
CAGTTCTTCG GCGTCTGTGG TCCCCTGATG CATGTTTGCC ACCGTCTGCT CGTCGACCAG 
TACAAATTCG AACTAGACAT CAATCTGCTG CCGGCGAAAT TCGTTAGCCT GCTGCAGAAT 
GGTCAGAATC CTAGTTTCTA TGCAGAACTC ATCAATGTGG AGACGATGAT GCACCAGGTG 
TCCACGCTCT CGCTCAACGC CTTCGACTTC TATGTGATTC ACTTTGTGCT ATATGCCCTG 
CAGCCACTAC ACTCTATCAA TCCCATAGCC ATGCAAATCC ACAATGTGCG CAGCAAAACG 
GTCTACTTGA AACTGGTGGC CGAGTACCTT AACAACTTCC TGCCGCTGCT TCCCGATGCA 
CGCATAGAAC CGGTGCACTT TAGCAGCGGG GTTAAGGCGC CACAGCCATT GCCAGCCCAA 
GCATTACAGC CCCAAAGACA ACCGCGCTAC ATTAAGATTC CCAGCTCCTA TCGCAATGGT 
GGAAACGTGT CGGGCGGCGG TGGCATTCCC AGTGCAAGCG TTGGCGTCGG GAACATATCA 
CCACAGTCCA ACAGCCCAAG TGCCAGCTCC AACCGGGCTT ACGCATGGCG ATCTGAAAGT 
GTACTCCACT TTTTCGTAGA CATCTGGCTG CGTTACGACA TCGAGTCGGA GCATCATTTG 
CCCAGCAGCG ATTTTGTGCG CGGCGTACGC ACCTTGGTCA AGCAGGTGCA CTTTTTTGCA 
AATGGCGCTC AGCACGACCA CAGTTCGCTG TGCGCGCTGC GTAAGGTATC GTTGAGTATG 
GTTAAGGCAA GAATCTACGC CTTTATTGTT GGTTTGATCG ATCGTTGGCC TCTGGACAGC 
TCGTTGATGG TGGTGCTGGA GCTTTGGCTC AGTTACATTC AGCCATGGAG ATACACCATA 
GCGTCGCTGA ACAATAAAAC ACCTAGTCTT TCCTACAGGC CGCCCATTTC GTCCTGCTTC 
GATGGCTTTA TTATCGACAA CCTTATTATG TACACTCACA TATTTATGCA GCTACTGCCA 
CACTTTGGGC GGTTGGACTA CACTGTGTAT AGGAACGCAT TTATGCTGTA CCGTCTGGCC 
ACAATCTTCT CTCAACATGA TTTAGTAGAT AAACTTCAGC GTTTTGAGGC TATACATGCA 
GGCAATTCTT TTGGCTTTGA CTCGCCACAG CGCCAAGTCA ACATAATGAA CAAATCCGTT 
TCTCCAGGCA CTCCGTGGAA TCAAGCTGTT AACATAAGCT CCGCCAAACT TTTTAGTTAT 
ACTATGCAAA CGCAAATGGA AACCTTCTTG TTGCTAATCA GTATGGCCCG CAACTCGGTG 
CTCAGAGACA TCGCCAAGCT ACGAAATGAA ATTGCGGAGA GACAGCGGTC TGAAGGATTT 
CTTAAGAACT TTTATAAGAA GATCTTTGGC GAGTGCACCC AGGAAGAAGT GACCCTGCGC 
GAGTTCAGTC GCATTCCGGA GGTTTTGCGT CAATGCATCG ACGCATTCTG TCGAACGTTT 
AATGTTGATC AAGCGAATCT ATCTATGCAT GAAACTCTGC CAGAGGAACC ATCTGTGCCT 
TCTGCGCCTG CTGTGCAAAA TTTCAGCTTT TTCGACGCCA GCGACACTTT GGACACCTCA 
AAGCTGAACC CGCACCAAAT GTCGCTCAAT GCTTCTAGCC TGCATGCCGC TGTCGATCCC 
GCCACGCTGC CCATCCAAAC CAATGAAGTT AGAGCATTGG TAAGAATGCT GCATTTCGTT 
TCGGAAAAGA TTAACAATAA GTATGGTAGT CAATTACAAG GATTCTACGT CCGCGACGAT 
TACTTCGGAA AAGTGGCCCG GCAACTGTTG TACGCTCCGA TGACGGAACA GTGGTTTGAC 
AAAAGCTCCG GCCACGTTGA AATATGTGAA AATCTGGTTC CTCCGCGAGT TTGCCTACGA 
CCATTGGGCT CTATACCCGC TCTCACAACG ATCGGTTGTT CGATGATCTT TGGACAACTG 
GTGTGGGGTG CCCCACTCCT GGGAATATTT ATTCTGGCGA CTGTGCTATT AGTCTATATC 
ATGCTGCAGG CATTGTTTTC CTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_650124.1
CDS	111..2414
Translation	MSQTMPPENLSSRLLTVLSLPLFERVHELSILFDRCSLRQVQEIFPHVVHSIFGIDGNPLGWGLRTTTLENNPVQFQTLHQFFGVCGPLMHVCHRLLVDQYKFELDINLLPAKFVSLLQNGQNPSFYAELINVETMMHQVSTLSLNAFDFYVIHFVLYALQPLHSINPIAMQIHNVRSKTVYLKLVAEYLNNFLPLLPDARIEPVHFSSGVKAPQPLPAQALQPQRQPRYIKIPSSYRNGGNVSGGGGIPSASVGVGNISPQSNSPSASSNRAYAWRSESVLHFFVDIWLRYDIESEHHLPSSDFVRGVRTLVKQVHFFANGAQHDHSSLCALRKVSLSMVKARIYAFIVGLIDRWPLDSSLMVVLELWLSYIQPWRYTIASLNNKTPSLSYRPPISSCFDGFIIDNLIMYTHIFMQLLPHFGRLDYTVYRNAFMLYRLATIFSQHDLVDKLQRFEAIHAGNSFGFDSPQRQVNIMNKSVSPGTPWNQAVNISSAKLFSYTMQTQMETFLLLISMARNSVLRDIAKLRNEIAERQRSEGFLKNFYKKIFGECTQEEVTLREFSRIPEVLRQCIDAFCRTFNVDQANLSMHETLPEEPSVPSAPAVQNFSFFDASDTLDTSKLNPHQMSLNASSLHAAVDPATLPIQTNEVRALVRMLHFVSEKINNKYGSQLQGFYVRDDYFGKVARQLLYAPMTEQWFDKSSGHVEICENLVPPRVCLRPLGSIPALTTIGCSMIFGQLVWGAPLLGIFILATVLLVYIMLQALFS

Target ORF information:

RefSeq Version	NM_141867.4
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein (CG6962), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_141867.4

ORF Insert Sequence:

ATGTCGCAGA CCATGCCGCC AGAAAACCTA AGCAGCCGCC TGTTGACGGT GCTCAGTTTG 
CCTCTATTCG AGCGCGTGCA CGAGCTGAGC ATCCTGTTCG ATCGGTGCTC CTTGCGCCAA 
GTGCAGGAGA TCTTCCCCCA CGTTGTGCAC TCCATCTTCG GGATAGATGG CAATCCGTTG 
GGCTGGGGCC TGCGGACCAC GACGCTTGAA AACAATCCGG TGCAATTCCA AACGCTGCAC 
CAGTTCTTCG GCGTCTGTGG TCCCCTGATG CATGTTTGCC ACCGTCTGCT CGTCGACCAG 
TACAAATTCG AACTAGACAT CAATCTGCTG CCGGCGAAAT TCGTTAGCCT GCTGCAGAAT 
GGTCAGAATC CTAGTTTCTA TGCAGAACTC ATCAATGTGG AGACGATGAT GCACCAGGTG 
TCCACGCTCT CGCTCAACGC CTTCGACTTC TATGTGATTC ACTTTGTGCT ATATGCCCTG 
CAGCCACTAC ACTCTATCAA TCCCATAGCC ATGCAAATCC ACAATGTGCG CAGCAAAACG 
GTCTACTTGA AACTGGTGGC CGAGTACCTT AACAACTTCC TGCCGCTGCT TCCCGATGCA 
CGCATAGAAC CGGTGCACTT TAGCAGCGGG GTTAAGGCGC CACAGCCATT GCCAGCCCAA 
GCATTACAGC CCCAAAGACA ACCGCGCTAC ATTAAGATTC CCAGCTCCTA TCGCAATGGT 
GGAAACGTGT CGGGCGGCGG TGGCATTCCC AGTGCAAGCG TTGGCGTCGG GAACATATCA 
CCACAGTCCA ACAGCCCAAG TGCCAGCTCC AACCGGGCTT ACGCATGGCG ATCTGAAAGT 
GTACTCCACT TTTTCGTAGA CATCTGGCTG CGTTACGACA TCGAGTCGGA GCATCATTTG 
CCCAGCAGCG ATTTTGTGCG CGGCGTACGC ACCTTGGTCA AGCAGGTGCA CTTTTTTGCA 
AATGGCGCTC AGCACGACCA CAGTTCGCTG TGCGCGCTGC GTAAGGTATC GTTGAGTATG 
GTTAAGGCAA GAATCTACGC CTTTATTGTT GGTTTGATCG ATCGTTGGCC TCTGGACAGC 
TCGTTGATGG TGGTGCTGGA GCTTTGGCTC AGTTACATTC AGCCATGGAG ATACACCATA 
GCGTCGCTGA ACAATAAAAC ACCTAGTCTT TCCTACAGGC CGCCCATTTC GTCCTGCTTC 
GATGGCTTTA TTATCGACAA CCTTATTATG TACACTCACA TATTTATGCA GCTACTGCCA 
CACTTTGGGC GGTTGGACTA CACTGTGTAT AGGAACGCAT TTATGCTGTA CCGTCTGGCC 
ACAATCTTCT CTCAACATGA TTTAGTAGAT AAACTTCAGC GTTTTGAGGC TATACATGCA 
GGCAATTCTT TTGGCTTTGA CTCGCCACAG CGCCAAGTCA ACATAATGAA CAAATCCGTT 
TCTCCAGGCA CTCCGTGGAA TCAAGCTGTT AACATAAGCT CCGCCAAACT TTTTAGTTAT 
ACTATGCAAA CGCAAATGGA AACCTTCTTG TTGCTAATCA GTATGGCCCG CAACTCGGTG 
CTCAGAGACA TCGCCAAGCT ACGAAATGAA ATTGCGGAGA GACAGCGGTC TGAAGGATTT 
CTTAAGAACT TTTATAAGAA GATCTTTGGC GAGTGCACCC AGGAAGAAGT GACCCTGCGC 
GAGTTCAGTC GCATTCCGGA GGTTTTGCGT CAATGCATCG ACGCATTCTG TCGAACGTTT 
AATGTTGATC AAGCGAATCT ATCTATGCAT GAAACTCTGC CAGAGGAACC ATCTGTGCCT 
TCTGCGCCTG CTGTGCAAAA TTTCAGCTTT TTCGACGCCA GCGACACTTT GGACACCTCA 
AAGCTGAACC CGCACCAAAT GTCGCTCAAT GCTTCTAGCC TGCATGCCGC TGTCGATCCC 
GCCACGCTGC CCATCCAAAC CAATGAAGTT AGAGCATTGG TAAGAATGCT GCATTTCGTT 
TCGGAAAAGA TTAACAATAA GTATGGTAGT CAATTACAAG GATTCTACGT CCGCGACGAT 
TACTTCGGAA AAGTGGCCCG GCAACTGTTG TACGCTCCGA TGACGGAACA GTGGTTTGAC 
AAAAGCTCCG GCCACGTTGA AATATGTGAA AATCTGGTTC CTCCGCGAGT TTGCCTACGA 
CCATTGGGCT CTATACCCGC TCTCACAACG ATCGGTTGTT CGATGATCTT TGGACAACTG 
GTGTGGGGTG CCCCACTCCT GGGAATATTT ATTCTGGCGA CTGTGCTATT AGTCTATATC 
ATGCTGCAGG CATTGTTTTC CTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG6962 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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