wa-cup cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	wa-cup
Entrez Gene ID	40892
Full Name	walker cup
Synonyms	CG10113,Dmel\CG10113
General protein information	Preferred Names walker cup Names CG10113 gene product from transcript CG10113-RB CG10113-PB wa-cup-PB walker-cup
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3R Map Location: 84D6-84D6

mRNA and Protein(s)

mRNA	Protein	Name
NM_141464.2	NP_649721.2	walker cup

Pathways from BioSystems

Homologies

Drosophila melanogaster (fruit fly)	wa-cup	NP_649721.2
Drosophila melanogaster (fruit fly)	CG15128	NP_611441.1
Drosophila melanogaster (fruit fly)	p-cup	NP_573216.1
Drosophila melanogaster (fruit fly)	r-cup	NP_608419.1
Drosophila melanogaster (fruit fly)	CG7634	NP_649332.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following wa-cup gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the wa-cup cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa04199	NM_141464.2 Latest version!	Drosophila melanogaster walker cup (wa-cup), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

wa-cup ( NM_141464.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_649721.2 Drosophila melanogaster walker cup (wa-cup), mRNA.

Price & Availability↑

CloneID	OFa04199
Clone ID Related Accession (Same CDS sequence)	NM_141464.2
Accession Version	NM_141464.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1743bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	walker cup
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Dec 17, 2009 this sequence version replaced NM_141464.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCCCAGCC AAATGAGCTT ATCGGAAGGT CTCCAGGCAC CAATTGCTGG AGTGCAGCCT 
CATCTGCAGC CATGGGAGGC ACATGCGTGG TCCCCGGATC GTCTGGGCTC TATGTACTCC 
GACTGGGCCA TGTTCTTTTT CACCCAACAG CGGTACGCAA ACGGACTTAG GTATTTCAAC 
AGCGCTCTGG ATCTGAATCC GTTCAATGAA AGAGCTCTGA TGCGGCGTAG TCAGCTGAAA 
AGATCGATGG GCCTAGCCTC CGAGGCTCTG AAGGATTGCT CCCGAGCAGA GGATCTGTTG 
ATGAGCCGAA AGCCACCAGT AACCAATCCC AATGTCAGTC TGGAAGTCTG CGATGCTCTG 
TACGAGTCCA ATCGCTTGGA AGATTCCAAA ATAAATCTGC ATTGTCATTT AAAGCGATTT 
AGCTCCGGCC AAAGAGGTCC TGTTCTCGAC CGTCTCAATG TGTTAAATGA GAACTTTCAT 
GACACATTAT CAGATGATAC CACCATGTCT GTGCAGCGCC TGATCAATCG CATGATGGCT 
AGTTTGGCTA AGGAGCCCAA GGATATTAAG GATACTTGCG ACGTGGTTAG CATAATGGAA 
AACGAGGAAA CCCATTTGTC CCCACTGGAA ATGGCTAGGC GAAAAAGGCA TTTTAAGATA 
TACAACCAGA CGTATCTGAA CAAATGCTGG GTGGATGTGG CCTTTCTGAA GACACTGCGA 
GATGATCCTA ATGTGCTGCC CAAGCATTGC AAAAAGTCAT CCGAGTATTT GGGCAAACTG 
ATGGCTAGCA ATTATAAAGC GGAACGCACT CTTACGAAAA CGCTGCATAC CCGAAGTCCC 
ATGTACGCCT TACATCAACA GAAATATCCC AACGAGGCAT TTTATAATAA GCACCGGGAG 
GAAAACCTAT ATCGCATTCA GTACCAGACG AGGCGGAATA TGTTCAAGAT TCTGCGCAGC 
ATTCGATTGC TAATTCGAGT TGGAGAACTC AATAAACTAA CCACATTTAT TGAGGAAGTC 
ATGGGCGACT ATGTCACCAT CAAGACGAAT CGCGTAATGC CGTGGAAATT TGAATTCACT 
AATGAGGTCT ACAACTACTT GGGTTTAGCT CGCATTAATG AATACAAAAT TCCCAGCAAT 
ATGACTGTCT TGCAGGGCAA ACAACGTCTG CTAACACTTT TTAGACTTCC CCTCAGTAAT 
AGTCTGGACA TGAAAAAATC AAAGACAAAA CGAACGAGTG CTCTGAATAT AACCAGATCG 
GCTACCACCG ATCCCAAAGC GGAGCATTTT AAGAAACAAG TCGTCCGACT GGAAAATCGT 
ATGCGGTTTG CCGAGTATCA CATTGAACGG GCCTATCTAC TGCACGAATT GGCCCAAGAG 
CATCTGAATT GTAACTCATT TGATGGGGCC TGCTCCATGG CACGAATGGC CCTGGAGGAG 
GCCATCAAAT GCAAGAGTGT TATATGGAGC TTTCTGAGTC TCATGGTTAT ATGCAAGGCC 
CACGCGATTC TCGGCAAGAT CGAACGGGAA AAGGAGATTC TGGCCGAAGC CTTCGAGCTG 
GCCAAGAAAA TGAAGAACCT TGACCTGTGC TTATTCATAG ATATATGCAT TAAAGTTAAT 
GCGGAGGAGA TGGAAATGAA GCGCATGGTT ACCACAGATT TGACTGCTAA GAGACAAAAG 
TTTGGCTCAA AAATGTTCCA AAGCAACGAT CAGGTGAATG AGGATCGCAA CCAAATTACC 
TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_649721.2
CDS	91..1833
Translation	MPSQMSLSEGLQAPIAGVQPHLQPWEAHAWSPDRLGSMYSDWAMFFFTQQRYANGLRYFNSALDLNPFNERALMRRSQLKRSMGLASEALKDCSRAEDLLMSRKPPVTNPNVSLEVCDALYESNRLEDSKINLHCHLKRFSSGQRGPVLDRLNVLNENFHDTLSDDTTMSVQRLINRMMASLAKEPKDIKDTCDVVSIMENEETHLSPLEMARRKRHFKIYNQTYLNKCWVDVAFLKTLRDDPNVLPKHCKKSSEYLGKLMASNYKAERTLTKTLHTRSPMYALHQQKYPNEAFYNKHREENLYRIQYQTRRNMFKILRSIRLLIRVGELNKLTTFIEEVMGDYVTIKTNRVMPWKFEFTNEVYNYLGLARINEYKIPSNMTVLQGKQRLLTLFRLPLSNSLDMKKSKTKRTSALNITRSATTDPKAEHFKKQVVRLENRMRFAEYHIERAYLLHELAQEHLNCNSFDGACSMARMALEEAIKCKSVIWSFLSLMVICKAHAILGKIEREKEILAEAFELAKKMKNLDLCLFIDICIKVNAEEMEMKRMVTTDLTAKRQKFGSKMFQSNDQVNEDRNQIT

Target ORF information:

RefSeq Version	NM_141464.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster walker cup (wa-cup), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_141464.2

ORF Insert Sequence:

ATGCCCAGCC AAATGAGCTT ATCGGAAGGT CTCCAGGCAC CAATTGCTGG AGTGCAGCCT 
CATCTGCAGC CATGGGAGGC ACATGCGTGG TCCCCGGATC GTCTGGGCTC TATGTACTCC 
GACTGGGCCA TGTTCTTTTT CACCCAACAG CGGTACGCAA ACGGACTTAG GTATTTCAAC 
AGCGCTCTGG ATCTGAATCC GTTCAATGAA AGAGCTCTGA TGCGGCGTAG TCAGCTGAAA 
AGATCGATGG GCCTAGCCTC CGAGGCTCTG AAGGATTGCT CCCGAGCAGA GGATCTGTTG 
ATGAGCCGAA AGCCACCAGT AACCAATCCC AATGTCAGTC TGGAAGTCTG CGATGCTCTG 
TACGAGTCCA ATCGCTTGGA AGATTCCAAA ATAAATCTGC ATTGTCATTT AAAGCGATTT 
AGCTCCGGCC AAAGAGGTCC TGTTCTCGAC CGTCTCAATG TGTTAAATGA GAACTTTCAT 
GACACATTAT CAGATGATAC CACCATGTCT GTGCAGCGCC TGATCAATCG CATGATGGCT 
AGTTTGGCTA AGGAGCCCAA GGATATTAAG GATACTTGCG ACGTGGTTAG CATAATGGAA 
AACGAGGAAA CCCATTTGTC CCCACTGGAA ATGGCTAGGC GAAAAAGGCA TTTTAAGATA 
TACAACCAGA CGTATCTGAA CAAATGCTGG GTGGATGTGG CCTTTCTGAA GACACTGCGA 
GATGATCCTA ATGTGCTGCC CAAGCATTGC AAAAAGTCAT CCGAGTATTT GGGCAAACTG 
ATGGCTAGCA ATTATAAAGC GGAACGCACT CTTACGAAAA CGCTGCATAC CCGAAGTCCC 
ATGTACGCCT TACATCAACA GAAATATCCC AACGAGGCAT TTTATAATAA GCACCGGGAG 
GAAAACCTAT ATCGCATTCA GTACCAGACG AGGCGGAATA TGTTCAAGAT TCTGCGCAGC 
ATTCGATTGC TAATTCGAGT TGGAGAACTC AATAAACTAA CCACATTTAT TGAGGAAGTC 
ATGGGCGACT ATGTCACCAT CAAGACGAAT CGCGTAATGC CGTGGAAATT TGAATTCACT 
AATGAGGTCT ACAACTACTT GGGTTTAGCT CGCATTAATG AATACAAAAT TCCCAGCAAT 
ATGACTGTCT TGCAGGGCAA ACAACGTCTG CTAACACTTT TTAGACTTCC CCTCAGTAAT 
AGTCTGGACA TGAAAAAATC AAAGACAAAA CGAACGAGTG CTCTGAATAT AACCAGATCG 
GCTACCACCG ATCCCAAAGC GGAGCATTTT AAGAAACAAG TCGTCCGACT GGAAAATCGT 
ATGCGGTTTG CCGAGTATCA CATTGAACGG GCCTATCTAC TGCACGAATT GGCCCAAGAG 
CATCTGAATT GTAACTCATT TGATGGGGCC TGCTCCATGG CACGAATGGC CCTGGAGGAG 
GCCATCAAAT GCAAGAGTGT TATATGGAGC TTTCTGAGTC TCATGGTTAT ATGCAAGGCC 
CACGCGATTC TCGGCAAGAT CGAACGGGAA AAGGAGATTC TGGCCGAAGC CTTCGAGCTG 
GCCAAGAAAA TGAAGAACCT TGACCTGTGC TTATTCATAG ATATATGCAT TAAAGTTAAT 
GCGGAGGAGA TGGAAATGAA GCGCATGGTT ACCACAGATT TGACTGCTAA GAGACAAAAG 
TTTGGCTCAA AAATGTTCCA AAGCAACGAT CAGGTGAATG AGGATCGCAA CCAAATTACC 
TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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wa-cup cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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