Hip1 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	Hip1
Entrez Gene ID	39450
Full Name	Huntingtin interacting protein 1
Synonyms	CG10971,Dmel\CG10971,Hip1R
General protein information	Preferred Names Huntingtin interacting protein 1 Names CG10971 gene product from transcript CG10971-RA CG10971-PA CG10971-PB Hip1-PA Hip1-PB huntingtin interacting protein 1
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3L Map Location: 69E2-69E2

mRNA and Protein(s)

mRNA	Protein	Name
NM_168513.2	NP_729827.1	huntingtin interacting protein 1, isoform B
NM_140340.2	NP_648597.2	huntingtin interacting protein 1, isoform A

Pathways from BioSystems

Homologies

Anopheles gambiae (African malaria mosquito)	AgaP_AGAP004801	XP_001689076.1
Drosophila melanogaster (fruit fly)	Hip1	NP_648597.2

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Huntingtin-interacting protein 1 (Hip1) functions in Notch-mediated neurogenesis and provides a functional link between Notch signaling and proteins related to Huntington disease.
Title: Huntingtin interacting protein 1 can regulate neurogenesis in Drosophila.

The following Hip1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Hip1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa20864	NM_140340.2 Latest version!	Drosophila melanogaster huntingtin interacting protein 1, transcript variant A (Hip1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00
OFa20865	NM_168513.2 Latest version!	Drosophila melanogaster huntingtin interacting protein 1, transcript variant B (Hip1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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2-4 Clone	40% OFF
5 or more Clone	50% OFF
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Hip1 ( NM_140340.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_648597.2 Drosophila melanogaster huntingtin interacting protein 1, transcript variant A (Hip1), mRNA.

Price & Availability↑

CloneID	OFa20864
Clone ID Related Accession (Same CDS sequence)	NM_140340.2
Accession Version	NM_140340.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3375bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	huntingtin interacting protein 1, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_140340.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCAACTC ACGCCGAAAA GGAGTTCTAC CACCTGAACG TCAGCGTGTC CAAAGCTTTA 
AATGGCCTGG AAGCGCCACT CAAAACCAAA CATGCCCGCT CCATTATTAT TATGATACAC 
AAGGCCAAAG AGGCCAAAAC ATTCTGGATG ATCATCTCCC GGCAGCCTTT GATGCAGAGT 
AGATTTACTG CCTGGAAGTT TTCGCATCTG CTGCACAAGG TCCTGCGAGA GGGTCATGAA 
AGTGCCATCC GCCACTCGCA GAGCCACAAG AAGATGATAC TGGAGGTGGG AAAAATGTGG 
GGCCTGCTGC AGGACGATAT TGGATGCTGC ATACAGGCGT ATAGTAAGCT CTTGGCCACA 
AAATTAAACT TCCACGACAA AAATCGAATG TTTCCCGGCA CCCTGAACAT TTCGTTCACG 
GAACTCTTCA TTGCTGTGGA TAGGGATTTA AATTATTGTT TTCAACTGTG CGTGGAAATT 
TTCGACTACT TGGAGGATAT AATTGCGCTG CAATTGACGA TATTTTCATC TATGGAAAAG 
TACAGAATGT CGTCGATGAC ACCGCAGGGA CAATGTAGAT TAGCGCCAAT AGTTTGCCTT 
ATCCAGGATT CCAATGCGTT GTACGATTTA AGCGTTCGGT TAATGTTTAA ACTACACGAT 
GGTGTACCAT ACGACGTTGT TTCCGGACAC AGAGATCGCT TTCACGGTCT GTTTTTAAAG 
TTGAAGAGTT TTTACAACAA CGTGCGACCG CTTCAGTATT TCAAGGACCT AATAACAATC 
CCGGAATTGC CGGACTCAAG TCCTAACTTC AAGTCCCAAA ACGATTTCAC CAGTTATGTA 
CCGCCAGTGG TTCACGTTCC CCAGGAGCCC GATCCGGTTG TTGAAGACCT TGTGGATACC 
AACAATCACG AGCTGGAAGC CTTCAGTCAA GCCCAGCAGC AGCTTAGCAT GTTGGAGGGT 
ATAATCAGCG AGAAAGAGGC TAGCATTGAG GAGCTGTCAT TCAAATTGGA CGCAATGCAA 
AAAAATTTCG ACGCACTGCA GCAAAGCTAC AGACACGACG TTCAGGAGTT GCAACAGAAC 
AATACTGTGC TGTCAAATGA TCTGGTCTTG GCGAGAGAAA TGTGTGCCAC CTTTCGGATG 
CAAAATGACG ATCTTGAGAT GCAACTGAAT CAGAACCCAA TTCTTTTACA AAAAGCTATG 
GAGGAAGAAG AAAAGCACAA GTTGTCGTCG GAAAAGTTTA ATAAACTTAA AACTCTATAC 
ACAAAGATTC GAGATGAGCA CATTCAGCTG CTGAGAGAGC AAAGTGATTG CAACAAGTCC 
TTAAATAAAG AGAAACAAGT AAACTCACAA CTATTGTTGG AAACTAAGGA GCTTACCAAT 
GAAATTTCCA AAATTAAAGT AAACGTAGAG GAAAAAGAGA AAACAAACTT GATTCTGCAA 
AAGCAAATCG AAGAGCACAA GGAGAAAATA GCACATCTTG AAGCAGTCAA AAACGAGATG 
AAGGAGAAAT TCGATGATGT GGTTAAACAA AAGGAAATTC AGGAACTCGA TATTATTTCC 
ACTTCCGAAA ACCTGAGGCT AAATTGCCTC AAAGTCGAAG AGCTTAATGG AAACCTCAAT 
GACACCCTGG AAAAACTGTC GAACGCCGAA AGCCAAATAA ATGCAAAGAC CGAGGATATC 
GAGAAAATGC TAAAAGCTTT TGAAGCGGAA AAGGCATTGC TCTTAACTCA GATTGAACAA 
CAGAGTGTTG AAAGTAAAAG CCATAGTGAA GCTCAAAACG CTCAATTGCA AGAAATAATG 
GATAACTTGG AACAAAAGGA TAAAGAGTTC AATGAAGTTA AGCTTCAGCT GTCCAGCGCA 
GAAAGCCAAA TCAGCTTAAA GGCATTGGAA ATTCAAAACA ATTTAAAGGC ATTTGAAGCG 
GAAAAATCAG TGCTATTAAC TAAAATAGAG CAGTTAGGTA TAGAGCATAA AAACAACAGC 
GAAGCACAAA ATGCTCAATT GCAGCTAACT TTAAACAACT TGGAGCAAAA TGAGAGTGCA 
TTACAGCAAA CCCAGGAAAT TGTGAATCAA TTGAGGCAGG AAAATGCTTC AGCGGGTCAG 
CGTAACGAGG ATTTGCAAAG CAAACTCTCG CTTACTGAGG TAAAACTAAC CCAAGCAACA 
CAGCAAATTG ATGCCGTGAC AAGTTCGTAC CAAATCTGTA GTACCGATTT GAGTGAACTC 
AGAAAATTGG TGATCAAGAC TGTAAAGGAA ATATGCAATT CGAAGTTGAG CGGATCGGAA 
CAACAGCCTT TGGATGCGGT GCCAAACATA ATACGCGAAA TGGAGACCAT TTTAAATAAG 
TTCAATAACG CATCGGCTAT AAACTATGTT GCTTCAACCG AAGGACTGCA AAATGTTATG 
TATCTGGGTT ATGTATTTAT AAAACTATAC GATCAATGTG ATGTTATCTA CAAAACAACA 
ACTGCAATTG AGACAGGTCA GGAAATTTTC TCAAAAACAA ATTTGTTATG TACCGATATC 
TGTCAATTGT TCCAATACTT ATTAAATAAT GAAACAAAAG AACCCGAGAG ACAGAAAACA 
ATCACTGATA TACAAACAAA GCTGAGAGAT ATTGAAAAGC TGATTGAGAA AATAAAGGCA 
TCATTTGAAC AGAAGATTGA TTTAGATAAG CTGCTCGAAA TCGAGCTTCG CGAGATGGAC 
GCTGCGATTG ATGATGCAGC CTCCAAAATT ACAGATCTAC TGGCAAAGGC TCGAGAGAAG 
GACAACCAAA CCAATTTAGA GGTAAACGGA AAAATAGTGG ATGCGTGTAC CACCTTGATG 
GAATGTGTCA AAGCTCTAAT CCAAAAATCT CGTCTCCTGC AACACGAAAT CGTGGCTTCC 
CAAAAAGGAA ATGCGAGTGC TAATGAGTTT TATAGGCGGA ACAGTCAGTG GTCAGATGGT 
TTGATATCCG CCTCGAAAAG TGTGGCGAAG GCAGCCAACT ATCTGGTGGA AGCTGCAAAC 
AAGGCTATTG AAAGTGAATC TGGCAAGAAC TTTGAACTCA TTGTGGCTGC CCAAGAAATT 
GCTGCCTGCA CGACCCAAAT GGTTATTGCG AGCAAAGTCA AGGCTGAACG TAATAGTCAA 
AAGCTAACCG ACCTCACAAA AGCCTCGCGA AGCGTAACGC AGGCAACAGG AACTCTGGTC 
GCCACCGTGA AGGATTGCAA CTCCCAGCTG GAGCAGCAGA GTGAAATAGA ACTTTCTAAG 
CTAACGCCAT CACAGATTAA AACGATGGAA ATGGAAATTC ATGTTAAAGT ACTCGAAATC 
GAACAAGCTC TCCAAATGCA ACGACTAAAA CTCTCATCGT TTCGTAAGGA GCATTACAAG 
AATGCCGATT ATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_648597.2
CDS	264..3638
Translation	MATHAEKEFYHLNVSVSKALNGLEAPLKTKHARSIIIMIHKAKEAKTFWMIISRQPLMQSRFTAWKFSHLLHKVLREGHESAIRHSQSHKKMILEVGKMWGLLQDDIGCCIQAYSKLLATKLNFHDKNRMFPGTLNISFTELFIAVDRDLNYCFQLCVEIFDYLEDIIALQLTIFSSMEKYRMSSMTPQGQCRLAPIVCLIQDSNALYDLSVRLMFKLHDGVPYDVVSGHRDRFHGLFLKLKSFYNNVRPLQYFKDLITIPELPDSSPNFKSQNDFTSYVPPVVHVPQEPDPVVEDLVDTNNHELEAFSQAQQQLSMLEGIISEKEASIEELSFKLDAMQKNFDALQQSYRHDVQELQQNNTVLSNDLVLAREMCATFRMQNDDLEMQLNQNPILLQKAMEEEEKHKLSSEKFNKLKTLYTKIRDEHIQLLREQSDCNKSLNKEKQVNSQLLLETKELTNEISKIKVNVEEKEKTNLILQKQIEEHKEKIAHLEAVKNEMKEKFDDVVKQKEIQELDIISTSENLRLNCLKVEELNGNLNDTLEKLSNAESQINAKTEDIEKMLKAFEAEKALLLTQIEQQSVESKSHSEAQNAQLQEIMDNLEQKDKEFNEVKLQLSSAESQISLKALEIQNNLKAFEAEKSVLLTKIEQLGIEHKNNSEAQNAQLQLTLNNLEQNESALQQTQEIVNQLRQENASAGQRNEDLQSKLSLTEVKLTQATQQIDAVTSSYQICSTDLSELRKLVIKTVKEICNSKLSGSEQQPLDAVPNIIREMETILNKFNNASAINYVASTEGLQNVMYLGYVFIKLYDQCDVIYKTTTAIETGQEIFSKTNLLCTDICQLFQYLLNNETKEPERQKTITDIQTKLRDIEKLIEKIKASFEQKIDLDKLLEIELREMDAAIDDAASKITDLLAKAREKDNQTNLEVNGKIVDACTTLMECVKALIQKSRLLQHEIVASQKGNASANEFYRRNSQWSDGLISASKSVAKAANYLVEAANKAIESESGKNFELIVAAQEIAACTTQMVIASKVKAERNSQKLTDLTKASRSVTQATGTLVATVKDCNSQLEQQSEIELSKLTPSQIKTMEMEIHVKVLEIEQALQMQRLKLSSFRKEHYKNADY

Target ORF information:

RefSeq Version	NM_140340.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster huntingtin interacting protein 1, transcript variant A (Hip1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_140340.2

ORF Insert Sequence:

ATGGCAACTC ACGCCGAAAA GGAGTTCTAC CACCTGAACG TCAGCGTGTC CAAAGCTTTA 
AATGGCCTGG AAGCGCCACT CAAAACCAAA CATGCCCGCT CCATTATTAT TATGATACAC 
AAGGCCAAAG AGGCCAAAAC ATTCTGGATG ATCATCTCCC GGCAGCCTTT GATGCAGAGT 
AGATTTACTG CCTGGAAGTT TTCGCATCTG CTGCACAAGG TCCTGCGAGA GGGTCATGAA 
AGTGCCATCC GCCACTCGCA GAGCCACAAG AAGATGATAC TGGAGGTGGG AAAAATGTGG 
GGCCTGCTGC AGGACGATAT TGGATGCTGC ATACAGGCGT ATAGTAAGCT CTTGGCCACA 
AAATTAAACT TCCACGACAA AAATCGAATG TTTCCCGGCA CCCTGAACAT TTCGTTCACG 
GAACTCTTCA TTGCTGTGGA TAGGGATTTA AATTATTGTT TTCAACTGTG CGTGGAAATT 
TTCGACTACT TGGAGGATAT AATTGCGCTG CAATTGACGA TATTTTCATC TATGGAAAAG 
TACAGAATGT CGTCGATGAC ACCGCAGGGA CAATGTAGAT TAGCGCCAAT AGTTTGCCTT 
ATCCAGGATT CCAATGCGTT GTACGATTTA AGCGTTCGGT TAATGTTTAA ACTACACGAT 
GGTGTACCAT ACGACGTTGT TTCCGGACAC AGAGATCGCT TTCACGGTCT GTTTTTAAAG 
TTGAAGAGTT TTTACAACAA CGTGCGACCG CTTCAGTATT TCAAGGACCT AATAACAATC 
CCGGAATTGC CGGACTCAAG TCCTAACTTC AAGTCCCAAA ACGATTTCAC CAGTTATGTA 
CCGCCAGTGG TTCACGTTCC CCAGGAGCCC GATCCGGTTG TTGAAGACCT TGTGGATACC 
AACAATCACG AGCTGGAAGC CTTCAGTCAA GCCCAGCAGC AGCTTAGCAT GTTGGAGGGT 
ATAATCAGCG AGAAAGAGGC TAGCATTGAG GAGCTGTCAT TCAAATTGGA CGCAATGCAA 
AAAAATTTCG ACGCACTGCA GCAAAGCTAC AGACACGACG TTCAGGAGTT GCAACAGAAC 
AATACTGTGC TGTCAAATGA TCTGGTCTTG GCGAGAGAAA TGTGTGCCAC CTTTCGGATG 
CAAAATGACG ATCTTGAGAT GCAACTGAAT CAGAACCCAA TTCTTTTACA AAAAGCTATG 
GAGGAAGAAG AAAAGCACAA GTTGTCGTCG GAAAAGTTTA ATAAACTTAA AACTCTATAC 
ACAAAGATTC GAGATGAGCA CATTCAGCTG CTGAGAGAGC AAAGTGATTG CAACAAGTCC 
TTAAATAAAG AGAAACAAGT AAACTCACAA CTATTGTTGG AAACTAAGGA GCTTACCAAT 
GAAATTTCCA AAATTAAAGT AAACGTAGAG GAAAAAGAGA AAACAAACTT GATTCTGCAA 
AAGCAAATCG AAGAGCACAA GGAGAAAATA GCACATCTTG AAGCAGTCAA AAACGAGATG 
AAGGAGAAAT TCGATGATGT GGTTAAACAA AAGGAAATTC AGGAACTCGA TATTATTTCC 
ACTTCCGAAA ACCTGAGGCT AAATTGCCTC AAAGTCGAAG AGCTTAATGG AAACCTCAAT 
GACACCCTGG AAAAACTGTC GAACGCCGAA AGCCAAATAA ATGCAAAGAC CGAGGATATC 
GAGAAAATGC TAAAAGCTTT TGAAGCGGAA AAGGCATTGC TCTTAACTCA GATTGAACAA 
CAGAGTGTTG AAAGTAAAAG CCATAGTGAA GCTCAAAACG CTCAATTGCA AGAAATAATG 
GATAACTTGG AACAAAAGGA TAAAGAGTTC AATGAAGTTA AGCTTCAGCT GTCCAGCGCA 
GAAAGCCAAA TCAGCTTAAA GGCATTGGAA ATTCAAAACA ATTTAAAGGC ATTTGAAGCG 
GAAAAATCAG TGCTATTAAC TAAAATAGAG CAGTTAGGTA TAGAGCATAA AAACAACAGC 
GAAGCACAAA ATGCTCAATT GCAGCTAACT TTAAACAACT TGGAGCAAAA TGAGAGTGCA 
TTACAGCAAA CCCAGGAAAT TGTGAATCAA TTGAGGCAGG AAAATGCTTC AGCGGGTCAG 
CGTAACGAGG ATTTGCAAAG CAAACTCTCG CTTACTGAGG TAAAACTAAC CCAAGCAACA 
CAGCAAATTG ATGCCGTGAC AAGTTCGTAC CAAATCTGTA GTACCGATTT GAGTGAACTC 
AGAAAATTGG TGATCAAGAC TGTAAAGGAA ATATGCAATT CGAAGTTGAG CGGATCGGAA 
CAACAGCCTT TGGATGCGGT GCCAAACATA ATACGCGAAA TGGAGACCAT TTTAAATAAG 
TTCAATAACG CATCGGCTAT AAACTATGTT GCTTCAACCG AAGGACTGCA AAATGTTATG 
TATCTGGGTT ATGTATTTAT AAAACTATAC GATCAATGTG ATGTTATCTA CAAAACAACA 
ACTGCAATTG AGACAGGTCA GGAAATTTTC TCAAAAACAA ATTTGTTATG TACCGATATC 
TGTCAATTGT TCCAATACTT ATTAAATAAT GAAACAAAAG AACCCGAGAG ACAGAAAACA 
ATCACTGATA TACAAACAAA GCTGAGAGAT ATTGAAAAGC TGATTGAGAA AATAAAGGCA 
TCATTTGAAC AGAAGATTGA TTTAGATAAG CTGCTCGAAA TCGAGCTTCG CGAGATGGAC 
GCTGCGATTG ATGATGCAGC CTCCAAAATT ACAGATCTAC TGGCAAAGGC TCGAGAGAAG 
GACAACCAAA CCAATTTAGA GGTAAACGGA AAAATAGTGG ATGCGTGTAC CACCTTGATG 
GAATGTGTCA AAGCTCTAAT CCAAAAATCT CGTCTCCTGC AACACGAAAT CGTGGCTTCC 
CAAAAAGGAA ATGCGAGTGC TAATGAGTTT TATAGGCGGA ACAGTCAGTG GTCAGATGGT 
TTGATATCCG CCTCGAAAAG TGTGGCGAAG GCAGCCAACT ATCTGGTGGA AGCTGCAAAC 
AAGGCTATTG AAAGTGAATC TGGCAAGAAC TTTGAACTCA TTGTGGCTGC CCAAGAAATT 
GCTGCCTGCA CGACCCAAAT GGTTATTGCG AGCAAAGTCA AGGCTGAACG TAATAGTCAA 
AAGCTAACCG ACCTCACAAA AGCCTCGCGA AGCGTAACGC AGGCAACAGG AACTCTGGTC 
GCCACCGTGA AGGATTGCAA CTCCCAGCTG GAGCAGCAGA GTGAAATAGA ACTTTCTAAG 
CTAACGCCAT CACAGATTAA AACGATGGAA ATGGAAATTC ATGTTAAAGT ACTCGAAATC 
GAACAAGCTC TCCAAATGCA ACGACTAAAA CTCTCATCGT TTCGTAAGGA GCATTACAAG 
AATGCCGATT ATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Hip1 ( NM_168513.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_729827.1 Drosophila melanogaster huntingtin interacting protein 1, transcript variant B (Hip1), mRNA.

Price & Availability↑

CloneID	OFa20865
Clone ID Related Accession (Same CDS sequence)	NM_168513.2
Accession Version	NM_168513.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3264bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	huntingtin interacting protein 1, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_168513.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGATACACA AGGCCAAAGA GGCCAAAACA TTCTGGATGA TCATCTCCCG GCAGCCTTTG 
ATGCAGAGTA GATTTACTGC CTGGAAGTTT TCGCATCTGC TGCACAAGGT CCTGCGAGAG 
GGTCATGAAA GTGCCATCCG CCACTCGCAG AGCCACAAGA AGATGATACT GGAGGTGGGA 
AAAATGTGGG GCCTGCTGCA GGACGATATT GGATGCTGCA TACAGGCGTA TAGTAAGCTC 
TTGGCCACAA AATTAAACTT CCACGACAAA AATCGAATGT TTCCCGGCAC CCTGAACATT 
TCGTTCACGG AACTCTTCAT TGCTGTGGAT AGGGATTTAA ATTATTGTTT TCAACTGTGC 
GTGGAAATTT TCGACTACTT GGAGGATATA ATTGCGCTGC AATTGACGAT ATTTTCATCT 
ATGGAAAAGT ACAGAATGTC GTCGATGACA CCGCAGGGAC AATGTAGATT AGCGCCAATA 
GTTTGCCTTA TCCAGGATTC CAATGCGTTG TACGATTTAA GCGTTCGGTT AATGTTTAAA 
CTACACGATG GTGTACCATA CGACGTTGTT TCCGGACACA GAGATCGCTT TCACGGTCTG 
TTTTTAAAGT TGAAGAGTTT TTACAACAAC GTGCGACCGC TTCAGTATTT CAAGGACCTA 
ATAACAATCC CGGAATTGCC GGACTCAAGT CCTAACTTCA AGTCCCAAAA CGATTTCACC 
AGTTATGTAC CGCCAGTGGT TCACGTTCCC CAGGAGCCCG ATCCGGTTGT TGAAGACCTT 
GTGGATACCA ACAATCACGA GCTGGAAGCC TTCAGTCAAG CCCAGCAGCA GCTTAGCATG 
TTGGAGGGTA TAATCAGCGA GAAAGAGGCT AGCATTGAGG AGCTGTCATT CAAATTGGAC 
GCAATGCAAA AAAATTTCGA CGCACTGCAG CAAAGCTACA GACACGACGT TCAGGAGTTG 
CAACAGAACA ATACTGTGCT GTCAAATGAT CTGGTCTTGG CGAGAGAAAT GTGTGCCACC 
TTTCGGATGC AAAATGACGA TCTTGAGATG CAACTGAATC AGAACCCAAT TCTTTTACAA 
AAAGCTATGG AGGAAGAAGA AAAGCACAAG TTGTCGTCGG AAAAGTTTAA TAAACTTAAA 
ACTCTATACA CAAAGATTCG AGATGAGCAC ATTCAGCTGC TGAGAGAGCA AAGTGATTGC 
AACAAGTCCT TAAATAAAGA GAAACAAGTA AACTCACAAC TATTGTTGGA AACTAAGGAG 
CTTACCAATG AAATTTCCAA AATTAAAGTA AACGTAGAGG AAAAAGAGAA AACAAACTTG 
ATTCTGCAAA AGCAAATCGA AGAGCACAAG GAGAAAATAG CACATCTTGA AGCAGTCAAA 
AACGAGATGA AGGAGAAATT CGATGATGTG GTTAAACAAA AGGAAATTCA GGAACTCGAT 
ATTATTTCCA CTTCCGAAAA CCTGAGGCTA AATTGCCTCA AAGTCGAAGA GCTTAATGGA 
AACCTCAATG ACACCCTGGA AAAACTGTCG AACGCCGAAA GCCAAATAAA TGCAAAGACC 
GAGGATATCG AGAAAATGCT AAAAGCTTTT GAAGCGGAAA AGGCATTGCT CTTAACTCAG 
ATTGAACAAC AGAGTGTTGA AAGTAAAAGC CATAGTGAAG CTCAAAACGC TCAATTGCAA 
GAAATAATGG ATAACTTGGA ACAAAAGGAT AAAGAGTTCA ATGAAGTTAA GCTTCAGCTG 
TCCAGCGCAG AAAGCCAAAT CAGCTTAAAG GCATTGGAAA TTCAAAACAA TTTAAAGGCA 
TTTGAAGCGG AAAAATCAGT GCTATTAACT AAAATAGAGC AGTTAGGTAT AGAGCATAAA 
AACAACAGCG AAGCACAAAA TGCTCAATTG CAGCTAACTT TAAACAACTT GGAGCAAAAT 
GAGAGTGCAT TACAGCAAAC CCAGGAAATT GTGAATCAAT TGAGGCAGGA AAATGCTTCA 
GCGGGTCAGC GTAACGAGGA TTTGCAAAGC AAACTCTCGC TTACTGAGGT AAAACTAACC 
CAAGCAACAC AGCAAATTGA TGCCGTGACA AGTTCGTACC AAATCTGTAG TACCGATTTG 
AGTGAACTCA GAAAATTGGT GATCAAGACT GTAAAGGAAA TATGCAATTC GAAGTTGAGC 
GGATCGGAAC AACAGCCTTT GGATGCGGTG CCAAACATAA TACGCGAAAT GGAGACCATT 
TTAAATAAGT TCAATAACGC ATCGGCTATA AACTATGTTG CTTCAACCGA AGGACTGCAA 
AATGTTATGT ATCTGGGTTA TGTATTTATA AAACTATACG ATCAATGTGA TGTTATCTAC 
AAAACAACAA CTGCAATTGA GACAGGTCAG GAAATTTTCT CAAAAACAAA TTTGTTATGT 
ACCGATATCT GTCAATTGTT CCAATACTTA TTAAATAATG AAACAAAAGA ACCCGAGAGA 
CAGAAAACAA TCACTGATAT ACAAACAAAG CTGAGAGATA TTGAAAAGCT GATTGAGAAA 
ATAAAGGCAT CATTTGAACA GAAGATTGAT TTAGATAAGC TGCTCGAAAT CGAGCTTCGC 
GAGATGGACG CTGCGATTGA TGATGCAGCC TCCAAAATTA CAGATCTACT GGCAAAGGCT 
CGAGAGAAGG ACAACCAAAC CAATTTAGAG GTAAACGGAA AAATAGTGGA TGCGTGTACC 
ACCTTGATGG AATGTGTCAA AGCTCTAATC CAAAAATCTC GTCTCCTGCA ACACGAAATC 
GTGGCTTCCC AAAAAGGAAA TGCGAGTGCT AATGAGTTTT ATAGGCGGAA CAGTCAGTGG 
TCAGATGGTT TGATATCCGC CTCGAAAAGT GTGGCGAAGG CAGCCAACTA TCTGGTGGAA 
GCTGCAAACA AGGCTATTGA AAGTGAATCT GGCAAGAACT TTGAACTCAT TGTGGCTGCC 
CAAGAAATTG CTGCCTGCAC GACCCAAATG GTTATTGCGA GCAAAGTCAA GGCTGAACGT 
AATAGTCAAA AGCTAACCGA CCTCACAAAA GCCTCGCGAA GCGTAACGCA GGCAACAGGA 
ACTCTGGTCG CCACCGTGAA GGATTGCAAC TCCCAGCTGG AGCAGCAGAG TGAAATAGAA 
CTTTCTAAGC TAACGCCATC ACAGATTAAA ACGATGGAAA TGGAAATTCA TGTTAAAGTA 
CTCGAAATCG AACAAGCTCT CCAAATGCAA CGACTAAAAC TCTCATCGTT TCGTAAGGAG 
CATTACAAGA ATGCCGATTA TTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_729827.1
CDS	552..3815
Translation	MIHKAKEAKTFWMIISRQPLMQSRFTAWKFSHLLHKVLREGHESAIRHSQSHKKMILEVGKMWGLLQDDIGCCIQAYSKLLATKLNFHDKNRMFPGTLNISFTELFIAVDRDLNYCFQLCVEIFDYLEDIIALQLTIFSSMEKYRMSSMTPQGQCRLAPIVCLIQDSNALYDLSVRLMFKLHDGVPYDVVSGHRDRFHGLFLKLKSFYNNVRPLQYFKDLITIPELPDSSPNFKSQNDFTSYVPPVVHVPQEPDPVVEDLVDTNNHELEAFSQAQQQLSMLEGIISEKEASIEELSFKLDAMQKNFDALQQSYRHDVQELQQNNTVLSNDLVLAREMCATFRMQNDDLEMQLNQNPILLQKAMEEEEKHKLSSEKFNKLKTLYTKIRDEHIQLLREQSDCNKSLNKEKQVNSQLLLETKELTNEISKIKVNVEEKEKTNLILQKQIEEHKEKIAHLEAVKNEMKEKFDDVVKQKEIQELDIISTSENLRLNCLKVEELNGNLNDTLEKLSNAESQINAKTEDIEKMLKAFEAEKALLLTQIEQQSVESKSHSEAQNAQLQEIMDNLEQKDKEFNEVKLQLSSAESQISLKALEIQNNLKAFEAEKSVLLTKIEQLGIEHKNNSEAQNAQLQLTLNNLEQNESALQQTQEIVNQLRQENASAGQRNEDLQSKLSLTEVKLTQATQQIDAVTSSYQICSTDLSELRKLVIKTVKEICNSKLSGSEQQPLDAVPNIIREMETILNKFNNASAINYVASTEGLQNVMYLGYVFIKLYDQCDVIYKTTTAIETGQEIFSKTNLLCTDICQLFQYLLNNETKEPERQKTITDIQTKLRDIEKLIEKIKASFEQKIDLDKLLEIELREMDAAIDDAASKITDLLAKAREKDNQTNLEVNGKIVDACTTLMECVKALIQKSRLLQHEIVASQKGNASANEFYRRNSQWSDGLISASKSVAKAANYLVEAANKAIESESGKNFELIVAAQEIAACTTQMVIASKVKAERNSQKLTDLTKASRSVTQATGTLVATVKDCNSQLEQQSEIELSKLTPSQIKTMEMEIHVKVLEIEQALQMQRLKLSSFRKEHYKNADY

Target ORF information:

RefSeq Version	NM_168513.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster huntingtin interacting protein 1, transcript variant B (Hip1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_168513.2

ORF Insert Sequence:

ATGATACACA AGGCCAAAGA GGCCAAAACA TTCTGGATGA TCATCTCCCG GCAGCCTTTG 
ATGCAGAGTA GATTTACTGC CTGGAAGTTT TCGCATCTGC TGCACAAGGT CCTGCGAGAG 
GGTCATGAAA GTGCCATCCG CCACTCGCAG AGCCACAAGA AGATGATACT GGAGGTGGGA 
AAAATGTGGG GCCTGCTGCA GGACGATATT GGATGCTGCA TACAGGCGTA TAGTAAGCTC 
TTGGCCACAA AATTAAACTT CCACGACAAA AATCGAATGT TTCCCGGCAC CCTGAACATT 
TCGTTCACGG AACTCTTCAT TGCTGTGGAT AGGGATTTAA ATTATTGTTT TCAACTGTGC 
GTGGAAATTT TCGACTACTT GGAGGATATA ATTGCGCTGC AATTGACGAT ATTTTCATCT 
ATGGAAAAGT ACAGAATGTC GTCGATGACA CCGCAGGGAC AATGTAGATT AGCGCCAATA 
GTTTGCCTTA TCCAGGATTC CAATGCGTTG TACGATTTAA GCGTTCGGTT AATGTTTAAA 
CTACACGATG GTGTACCATA CGACGTTGTT TCCGGACACA GAGATCGCTT TCACGGTCTG 
TTTTTAAAGT TGAAGAGTTT TTACAACAAC GTGCGACCGC TTCAGTATTT CAAGGACCTA 
ATAACAATCC CGGAATTGCC GGACTCAAGT CCTAACTTCA AGTCCCAAAA CGATTTCACC 
AGTTATGTAC CGCCAGTGGT TCACGTTCCC CAGGAGCCCG ATCCGGTTGT TGAAGACCTT 
GTGGATACCA ACAATCACGA GCTGGAAGCC TTCAGTCAAG CCCAGCAGCA GCTTAGCATG 
TTGGAGGGTA TAATCAGCGA GAAAGAGGCT AGCATTGAGG AGCTGTCATT CAAATTGGAC 
GCAATGCAAA AAAATTTCGA CGCACTGCAG CAAAGCTACA GACACGACGT TCAGGAGTTG 
CAACAGAACA ATACTGTGCT GTCAAATGAT CTGGTCTTGG CGAGAGAAAT GTGTGCCACC 
TTTCGGATGC AAAATGACGA TCTTGAGATG CAACTGAATC AGAACCCAAT TCTTTTACAA 
AAAGCTATGG AGGAAGAAGA AAAGCACAAG TTGTCGTCGG AAAAGTTTAA TAAACTTAAA 
ACTCTATACA CAAAGATTCG AGATGAGCAC ATTCAGCTGC TGAGAGAGCA AAGTGATTGC 
AACAAGTCCT TAAATAAAGA GAAACAAGTA AACTCACAAC TATTGTTGGA AACTAAGGAG 
CTTACCAATG AAATTTCCAA AATTAAAGTA AACGTAGAGG AAAAAGAGAA AACAAACTTG 
ATTCTGCAAA AGCAAATCGA AGAGCACAAG GAGAAAATAG CACATCTTGA AGCAGTCAAA 
AACGAGATGA AGGAGAAATT CGATGATGTG GTTAAACAAA AGGAAATTCA GGAACTCGAT 
ATTATTTCCA CTTCCGAAAA CCTGAGGCTA AATTGCCTCA AAGTCGAAGA GCTTAATGGA 
AACCTCAATG ACACCCTGGA AAAACTGTCG AACGCCGAAA GCCAAATAAA TGCAAAGACC 
GAGGATATCG AGAAAATGCT AAAAGCTTTT GAAGCGGAAA AGGCATTGCT CTTAACTCAG 
ATTGAACAAC AGAGTGTTGA AAGTAAAAGC CATAGTGAAG CTCAAAACGC TCAATTGCAA 
GAAATAATGG ATAACTTGGA ACAAAAGGAT AAAGAGTTCA ATGAAGTTAA GCTTCAGCTG 
TCCAGCGCAG AAAGCCAAAT CAGCTTAAAG GCATTGGAAA TTCAAAACAA TTTAAAGGCA 
TTTGAAGCGG AAAAATCAGT GCTATTAACT AAAATAGAGC AGTTAGGTAT AGAGCATAAA 
AACAACAGCG AAGCACAAAA TGCTCAATTG CAGCTAACTT TAAACAACTT GGAGCAAAAT 
GAGAGTGCAT TACAGCAAAC CCAGGAAATT GTGAATCAAT TGAGGCAGGA AAATGCTTCA 
GCGGGTCAGC GTAACGAGGA TTTGCAAAGC AAACTCTCGC TTACTGAGGT AAAACTAACC 
CAAGCAACAC AGCAAATTGA TGCCGTGACA AGTTCGTACC AAATCTGTAG TACCGATTTG 
AGTGAACTCA GAAAATTGGT GATCAAGACT GTAAAGGAAA TATGCAATTC GAAGTTGAGC 
GGATCGGAAC AACAGCCTTT GGATGCGGTG CCAAACATAA TACGCGAAAT GGAGACCATT 
TTAAATAAGT TCAATAACGC ATCGGCTATA AACTATGTTG CTTCAACCGA AGGACTGCAA 
AATGTTATGT ATCTGGGTTA TGTATTTATA AAACTATACG ATCAATGTGA TGTTATCTAC 
AAAACAACAA CTGCAATTGA GACAGGTCAG GAAATTTTCT CAAAAACAAA TTTGTTATGT 
ACCGATATCT GTCAATTGTT CCAATACTTA TTAAATAATG AAACAAAAGA ACCCGAGAGA 
CAGAAAACAA TCACTGATAT ACAAACAAAG CTGAGAGATA TTGAAAAGCT GATTGAGAAA 
ATAAAGGCAT CATTTGAACA GAAGATTGAT TTAGATAAGC TGCTCGAAAT CGAGCTTCGC 
GAGATGGACG CTGCGATTGA TGATGCAGCC TCCAAAATTA CAGATCTACT GGCAAAGGCT 
CGAGAGAAGG ACAACCAAAC CAATTTAGAG GTAAACGGAA AAATAGTGGA TGCGTGTACC 
ACCTTGATGG AATGTGTCAA AGCTCTAATC CAAAAATCTC GTCTCCTGCA ACACGAAATC 
GTGGCTTCCC AAAAAGGAAA TGCGAGTGCT AATGAGTTTT ATAGGCGGAA CAGTCAGTGG 
TCAGATGGTT TGATATCCGC CTCGAAAAGT GTGGCGAAGG CAGCCAACTA TCTGGTGGAA 
GCTGCAAACA AGGCTATTGA AAGTGAATCT GGCAAGAACT TTGAACTCAT TGTGGCTGCC 
CAAGAAATTG CTGCCTGCAC GACCCAAATG GTTATTGCGA GCAAAGTCAA GGCTGAACGT 
AATAGTCAAA AGCTAACCGA CCTCACAAAA GCCTCGCGAA GCGTAACGCA GGCAACAGGA 
ACTCTGGTCG CCACCGTGAA GGATTGCAAC TCCCAGCTGG AGCAGCAGAG TGAAATAGAA 
CTTTCTAAGC TAACGCCATC ACAGATTAAA ACGATGGAAA TGGAAATTCA TGTTAAAGTA 
CTCGAAATCG AACAAGCTCT CCAAATGCAA CGACTAAAAC TCTCATCGTT TCGTAAGGAG 
CATTACAAGA ATGCCGATTA TTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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Hip1 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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