yps cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	yps
Entrez Gene ID	39377
Full Name	ypsilon schachtel
Synonyms	CG5654,Dmel\CG5654,YPS,Yps,p45,p57
General protein information	Preferred Names ypsilon schachtel Names CG5654 gene product from transcript CG5654-RB CG5654-PA CG5654-PB yps-PA yps-PB ypsilon schactel
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3L Map Location: 68F4-68F4

mRNA and Protein(s)

mRNA	Protein	Name
NM_001259801.2	NP_001246730.1	ypsilon schachtel, isoform B
NM_079309.4	NP_524033.2	ypsilon schachtel, isoform A

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

yps interacts genetically with orb, a positive regulator of oskar mRNA localization and translation.
Title: Ypsilon Schachtel, a Drosophila Y-box protein, acts antagonistically to Orb in the oskar mRNA localization and translation pathway.

The following yps gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the yps cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa18315	NM_079309.4 Latest version!	Drosophila melanogaster ypsilon schachtel (yps), transcript variant A, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
OFa20835	NM_001259801.2 Latest version!	Drosophila melanogaster ypsilon schachtel (yps), transcript variant B, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

yps ( NM_079309.4 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_524033.2 Drosophila melanogaster ypsilon schachtel (yps), transcript variant A, mRNA.

Price & Availability↑

CloneID	OFa18315
Clone ID Related Accession (Same CDS sequence)	NM_079309.4
Accession Version	NM_079309.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1059bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	ypsilon schachtel, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_079309.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCTGATG CCGCGGAGAG TAAGCCACTG GCCGCCGAAC AGCAGCAGGC GCAGCAGCAG 
CCGGAGCAGC AGCAGAATCC GCCGAATCCG CAGGAGCAGG ATCACGAGCA GGAGCCGCTG 
GACGAGCTGC AGGGACAGCA GGGCCAGCCC GCTCCGCCCA CCAAGGAAGT CATCGCCACC 
AAAGTCACCG GCACCGTCAA GTGGTTCAAC GTGAAGAGCG GCTACGGCTT CATCAACCGC 
AACGACACCA GAGAGGATGT CTTTGTGCAC CAGAGCGCCA TTGCGCGGAA CAACCCCAAA 
AAGGCGGTCC GCTCGGTGGG CGACGGTGAG GTCGTTGAGT TCGACGTGGT CATTGGTGAG 
AAGGGCAACG AGGCGGCCAA CGTGACCGGT CCCTCCGGTG AGCCGGTGCG GGGCAGTCAG 
TTTGCAGCGG ACAAGCGCCG TAACTTCCGT CCCTGGATGA AGAAGAATCG CCGCAAGGAT 
GGCGAAGTGG AAGGCGAAGA CGCCGAATCG TCGGCCCAGC AGCAACAGCA GCAGGCGGCA 
CCAATCGTTG ACGGGCAGCC GCAGCAGCAG GTGCAGTCCG GCCCGCGTCA ACCACGACAG 
AACTTCCGCC GAGGACCACC CGGTGGACCG CCCGGAGGAC CTCGAGGTGG CCCCCGAGGA 
CCGCCTGGTG GAGCTCCCGG TGGCCCCCGG CGCTACAACA ACTATTATCT GCGTCAGCCG 
AGACGCGGCC TGGGCGGCGG TGACGGCAGC GCCGAGCCCG GTGTCCACGA TCAGAATCCC 
GAGGGTCTGC AGCGCGGCGA GGGTCAGGGA CCACGTCGCG GTGGAGGCCC ACCGGGCGGA 
CCCCAGAGGC GCTTCTTCCG ACGCAACTTC AACAATGGTC CACCGCCACC ACGCCGCGAC 
GGCGGAGAAT ACATTCAAGG CCAGGGACCG CCACGCCCAC AACAGCCACG TCCACGTCGC 
CAGAGGAAAC CAAATGGCCC TGGCGGTGGT TCGGAGCAGC AGCCAGAGAA GAACGGCGCT 
CAAGAGCTGC AAAATACAAC CACAGAGAGC ACTGCATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_524033.2
CDS	265..1323
Translation	MADAAESKPLAAEQQQAQQQPEQQQNPPNPQEQDHEQEPLDELQGQQGQPAPPTKEVIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRNFRPWMKKNRRKDGEVEGEDAESSAQQQQQQAAPIVDGQPQQQVQSGPRQPRQNFRRGPPGGPPGGPRGGPRGPPGGAPGGPRRYNNYYLRQPRRGLGGGDGSAEPGVHDQNPEGLQRGEGQGPRRGGGPPGGPQRRFFRRNFNNGPPPPRRDGGEYIQGQGPPRPQQPRPRRQRKPNGPGGGSEQQPEKNGAQELQNTTTESTA

Target ORF information:

RefSeq Version	NM_079309.4
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster ypsilon schachtel (yps), transcript variant A, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_079309.4

ORF Insert Sequence:

ATGGCTGATG CCGCGGAGAG TAAGCCACTG GCCGCCGAAC AGCAGCAGGC GCAGCAGCAG 
CCGGAGCAGC AGCAGAATCC GCCGAATCCG CAGGAGCAGG ATCACGAGCA GGAGCCGCTG 
GACGAGCTGC AGGGACAGCA GGGCCAGCCC GCTCCGCCCA CCAAGGAAGT CATCGCCACC 
AAAGTCACCG GCACCGTCAA GTGGTTCAAC GTGAAGAGCG GCTACGGCTT CATCAACCGC 
AACGACACCA GAGAGGATGT CTTTGTGCAC CAGAGCGCCA TTGCGCGGAA CAACCCCAAA 
AAGGCGGTCC GCTCGGTGGG CGACGGTGAG GTCGTTGAGT TCGACGTGGT CATTGGTGAG 
AAGGGCAACG AGGCGGCCAA CGTGACCGGT CCCTCCGGTG AGCCGGTGCG GGGCAGTCAG 
TTTGCAGCGG ACAAGCGCCG TAACTTCCGT CCCTGGATGA AGAAGAATCG CCGCAAGGAT 
GGCGAAGTGG AAGGCGAAGA CGCCGAATCG TCGGCCCAGC AGCAACAGCA GCAGGCGGCA 
CCAATCGTTG ACGGGCAGCC GCAGCAGCAG GTGCAGTCCG GCCCGCGTCA ACCACGACAG 
AACTTCCGCC GAGGACCACC CGGTGGACCG CCCGGAGGAC CTCGAGGTGG CCCCCGAGGA 
CCGCCTGGTG GAGCTCCCGG TGGCCCCCGG CGCTACAACA ACTATTATCT GCGTCAGCCG 
AGACGCGGCC TGGGCGGCGG TGACGGCAGC GCCGAGCCCG GTGTCCACGA TCAGAATCCC 
GAGGGTCTGC AGCGCGGCGA GGGTCAGGGA CCACGTCGCG GTGGAGGCCC ACCGGGCGGA 
CCCCAGAGGC GCTTCTTCCG ACGCAACTTC AACAATGGTC CACCGCCACC ACGCCGCGAC 
GGCGGAGAAT ACATTCAAGG CCAGGGACCG CCACGCCCAC AACAGCCACG TCCACGTCGC 
CAGAGGAAAC CAAATGGCCC TGGCGGTGGT TCGGAGCAGC AGCCAGAGAA GAACGGCGCT 
CAAGAGCTGC AAAATACAAC CACAGAGAGC ACTGCATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

yps ( NM_001259801.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001246730.1 Drosophila melanogaster ypsilon schachtel (yps), transcript variant B, mRNA.

Price & Availability↑

CloneID	OFa20835
Clone ID Related Accession (Same CDS sequence)	NM_001259801.2
Accession Version	NM_001259801.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1023bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	ypsilon schachtel, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_001259801.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCTGATG CCGCGGAGAG TAAGCCACTG GCCGCCGAAC AGCAGCAGGC GCAGCAGCAG 
CCGGAGCAGC AGCAGAATCC GCCGAATCCG CAGGAGCAGG ATCACGAGCA GGAGCCGCTG 
GACGAGCTGC AGGGACAGCA GGGCCAGCCC GCTCCGCCCA CCAAGGAAGT CATCGCCACC 
AAAGTCACCG GCACCGTCAA GTGGTTCAAC GTGAAGAGCG GCTACGGCTT CATCAACCGC 
AACGACACCA GAGAGGATGT CTTTGTGCAC CAGAGCGCCA TTGCGCGGAA CAACCCCAAA 
AAGGCGGTCC GCTCGGTGGG CGACGGTGAG GTCGTTGAGT TCGACGTGGT CATTGGTGAG 
AAGGGCAACG AGGCGGCCAA CGTGACCGGT CCCTCCGGTG AGCCGGTGCG GGGCAGTCAG 
TTTGCAGCGG ACAAGCGCCG TAACTTCCGT CCCTGGATGA AGAAGAATCG CCGCAAGGAT 
GGCGAAGTGG AAGGCGAAGA CGCCGAATCG TCGGCCCAGC AGCAACAGCA GCAGGCGGCA 
CCAATCGTTG ACGGGCAGCC GCAGCAGCAG GTGCAGTCCG GCCCGCGTCA ACCACGACAG 
AACTTCCGCC GAGGACCACC CGGTGGACCG CCCGGAGGAC CTCGAGGTGG CCCCCGAGGA 
CCGCCTGGTG GAGCTCCCGG TGGCCCCCGG CGCTACAACA ACTATTATCT GCGTCAGCCG 
AGACGCGGCC TGGGCGGCGG TGACGGCAGC GCCGAGCCCG GTGTCCACGA TCAGAATCCC 
GAGGGTCTGC AGCGCGGCGA GGGTCAGGGA CCACGTCGCG GTGGAGGCCC ACCGGGCGGA 
CCCCAGAGGC GCTTCTTCCG ACGCAACTTC AACAATGGTC CACCGCCACC ACGCCGCGAC 
GGCGGAGAAT ACATTCAAGG CCAGGGACCG CCACGCCCAC AACAGCCACG TCCACGTCGC 
CAGAGGAAAC CAAATGGCCC TGGCGGTGGT TCGGAGCAGC AGCCAGAGAA GGTAATGAAC 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001246730.1
CDS	265..1287
Translation	MADAAESKPLAAEQQQAQQQPEQQQNPPNPQEQDHEQEPLDELQGQQGQPAPPTKEVIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRNFRPWMKKNRRKDGEVEGEDAESSAQQQQQQAAPIVDGQPQQQVQSGPRQPRQNFRRGPPGGPPGGPRGGPRGPPGGAPGGPRRYNNYYLRQPRRGLGGGDGSAEPGVHDQNPEGLQRGEGQGPRRGGGPPGGPQRRFFRRNFNNGPPPPRRDGGEYIQGQGPPRPQQPRPRRQRKPNGPGGGSEQQPEKVMN

Target ORF information:

RefSeq Version	NM_001259801.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster ypsilon schachtel (yps), transcript variant B, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001259801.2

ORF Insert Sequence:

ATGGCTGATG CCGCGGAGAG TAAGCCACTG GCCGCCGAAC AGCAGCAGGC GCAGCAGCAG 
CCGGAGCAGC AGCAGAATCC GCCGAATCCG CAGGAGCAGG ATCACGAGCA GGAGCCGCTG 
GACGAGCTGC AGGGACAGCA GGGCCAGCCC GCTCCGCCCA CCAAGGAAGT CATCGCCACC 
AAAGTCACCG GCACCGTCAA GTGGTTCAAC GTGAAGAGCG GCTACGGCTT CATCAACCGC 
AACGACACCA GAGAGGATGT CTTTGTGCAC CAGAGCGCCA TTGCGCGGAA CAACCCCAAA 
AAGGCGGTCC GCTCGGTGGG CGACGGTGAG GTCGTTGAGT TCGACGTGGT CATTGGTGAG 
AAGGGCAACG AGGCGGCCAA CGTGACCGGT CCCTCCGGTG AGCCGGTGCG GGGCAGTCAG 
TTTGCAGCGG ACAAGCGCCG TAACTTCCGT CCCTGGATGA AGAAGAATCG CCGCAAGGAT 
GGCGAAGTGG AAGGCGAAGA CGCCGAATCG TCGGCCCAGC AGCAACAGCA GCAGGCGGCA 
CCAATCGTTG ACGGGCAGCC GCAGCAGCAG GTGCAGTCCG GCCCGCGTCA ACCACGACAG 
AACTTCCGCC GAGGACCACC CGGTGGACCG CCCGGAGGAC CTCGAGGTGG CCCCCGAGGA 
CCGCCTGGTG GAGCTCCCGG TGGCCCCCGG CGCTACAACA ACTATTATCT GCGTCAGCCG 
AGACGCGGCC TGGGCGGCGG TGACGGCAGC GCCGAGCCCG GTGTCCACGA TCAGAATCCC 
GAGGGTCTGC AGCGCGGCGA GGGTCAGGGA CCACGTCGCG GTGGAGGCCC ACCGGGCGGA 
CCCCAGAGGC GCTTCTTCCG ACGCAACTTC AACAATGGTC CACCGCCACC ACGCCGCGAC 
GGCGGAGAAT ACATTCAAGG CCAGGGACCG CCACGCCCAC AACAGCCACG TCCACGTCGC 
CAGAGGAAAC CAAATGGCCC TGGCGGTGGT TCGGAGCAGC AGCCAGAGAA GGTAATGAAC 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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yps cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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