CG6071 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG6071
Entrez Gene ID	39308
Full Name	CG6071 gene product from transcript CG6071-RA
Synonyms	Dmel\CG6071
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3L Map Location: 68D1-68D1

mRNA and Protein(s)

mRNA	Protein	Name
NM_140231.2	NP_648488.1	uncharacterized protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG6071 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG6071 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa18270	NM_140231.2 Latest version!	Drosophila melanogaster uncharacterized protein (CG6071), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$510.30 $729.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG6071 ( NM_140231.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_648488.1 Drosophila melanogaster uncharacterized protein (CG6071), partial mRNA.

Price & Availability↑

CloneID	OFa18270
Clone ID Related Accession (Same CDS sequence)	NM_140231.2
Accession Version	NM_140231.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2889bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_140231.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on the 5' end.

ATGTTGCTTA AAATACTTGT ATTGTTTTGC ACATTATTAT CGGCAAAATT GGCAGAATCC 
TTTGTGAAAC CACTGCGCTA TAATTTGACA ATTCTTACGC GCCTGGGGAG TGAAGATGAG 
CAGAACCAGT TTGAGGGCAT CGTGTCCATC GATATTGAAG CGACACAACC AACTCGCGTC 
ATCTATTTAA ATTCTCTCAA CATAACAATA TCTAGACAAA GAACATGGAT ATACCGATGG 
GCTAGCGGCA GAAAAATCGG TGCTCTCCAG ATAAAGAGAA TTATTAAAAA GACCAGCTTA 
ATTAAGATAG TAATCGAACT CCCACTCAGA AGTGGCGAGA TATACACACT CAACATGTTA 
TTCTCGGGTA ACCTAGATCG GAGTCAGCAA TATGGCTACT TTGCCGGCTA CTACGACAAA 
ACGCCGAGGG TTTTCTACTC CGCGACTCGC TTGGAACCGG ACTATGCTCA CACCGTGTTT 
CCCTGCTTCG ATGACCCACG CTTTCGGACC CCATATAACA TAACATTAGT GCACGACCGG 
AAATACGTTG CACTCAGCAA TATGCCACCC GTAGAGGAGA AACCATACAA GGAGATCGAA 
AACTATGTGT CGACGACATT TATGGGTTCA CCACCGCTAG CCACACAGCA GGTCATGTGG 
ACTCTTCATC AATTAGAGAA AGTTTACAGT GGTCCTGCGG CTGCGGGTGA GAATATCACC 
GTCTGGTCAC GGCCGCACTT GGCAGAGAAA CTGGCGAAGG TGCCGGAAAT GACGCCCAAT 
TTGTTTAGTA AATACGAAAC CTTGTTCGCA TATCCATTGC CAAAAGGAGC AGATTGGGGT 
GGTAAGGTCG ATCATGTAGT GTTGCCTAGA TATACAGAAA TGTATAGCGG TCAGGGCATA 
ATGGTGTACG GCGAGGATAT CGTGGACTCA GGACAAAACG GTCTTGAAAG CCTGCAGGAA 
ACGCTTGCGG AGCTGGTAGC GCGGCAATGG AACGGATTGC TGGTGAACCT CGAAGATTCG 
GATGAAGAAT ATGTGCGGAA CGGCATTAAC TACTATCTGA GCGTCCAGGT GATGGCCATG 
GACAAAGAGG CGTATAACAC GACTCACCTT TCAAAAACGC GTCTAGATGT TTTGTATCAT 
GATTCCTTGG CCAAAGTAAA ATCGATCGCT ACCGATGTGA AGGAATCCGG ACACCAGAAA 
CTCCGCAAAA AGAAAATGTG TCTGCTCATC CACATGCTAA AGGTGGCCCT CGGTGATAAG 
TTGTTCTTGA AGGGACTGCA AGAGTTCTTT AAGCGATACG CCAACTCATC TGCTTCATCC 
AAGGAACTGT GGGAGGAGTT CCAGCGAGGG GCACGCCGAA GTCACCAACT GCCCACCGGT 
GTGAGTTTAC CCACTGTGAT GGAGTCATGG ATGAAGCAAC CAGGTTTCCC GCTACTCACC 
GTCCAGCGCG ACGATGCGAA GCAAATTGTG ACCATAACGC AGAGTCGCTA TTATCAGAAA 
TATTTGGACA ACAGTTCCAA TGACTGCTGG TGGGTCCCGG TCGCTTACAT CGTCAGGAAT 
CTTACGTTGC CTCAGGTGGA GTGGCTCGGC TGTCAGAAAA ATAGTAGAGA TATATTGGAA 
CTCAGCCACA TCGCTAATCC GGAGGATTGG CTATTAATAA ATGTGGATGC TGCAGTTCCT 
CTTCGCGTCT TCTACGATTC ATACAACTTG CAGCTGATCA GTGAGGCTCT GCGTCAGGAT 
TTCACCCAGA TTCCGGAGCT TAGTCGCATC CAGTTGGTCG ATGATGCCCT CAGTCTATCG 
TGGTCAGGTC GGTTGCCGTA TAACGTCACC TTAAACGTGA TCTCATATCT TTCGAATGAG 
ACCAGCGTTT TGGTTTGGGA AACAGCGCTT TTGAATTTGG AGAAGCTACA GAGTATCATG 
CGAATGACTA CGGGCTTTCG TATCTTTAAG CTTTACATGC AGAAACTTAT TGAGCCAGCT 
TTTAAAACAA CATTAAATTC CCTCTCAACA AAAGCCAGAA CTGGTTCGGA AATACCGATC 
AATACGAAAT CGCCGGTCAC CACGGAGTCC TCGGGCACCA CAGAATCCCC GGACACCACG 
GAATCCCCGG ACACCGCGGA ATCCCCGGAC ACCACGGAAT CCTCGAACAC CACAGAATCC 
CCGGACACCA CGGAATCCTC GGACACCACA GAATCCCCGG ACACCACCAA ATCGGATTTG 
TCGTTGTCGG CGATTTTATA CCGGCTGGCG TGTCAGTTCG AAATCAAGGA ATGCCTAACG 
GACGCACAGC AGCGATTTCA GGCGGCGATG GACCAGAAAT CTAGCTCATC CATTCCGGAG 
GAGATTCGGG AAATCGTGCT CTGCAGGGGC ATTCGTAACG GCTTGGAGGT TCATTGGATA 
ATGGTGCGGG ATATGTTCTT TGAGTCCGAG AATGATAAGG AGAGGAGTAT CCTTCTAAAT 
TCTCTCAGCT GCACCACGGA GTATTGGGCG ATGCAGAAGT TGCTCAGCTG GGCGCTTGAC 
TCAAAAAAGG TTCCAAGAAC GATGACAGCC AGTCTTCTGA GCGCCGTTTT GAGATCCCCA 
TTGGGCTACT ATGTGGGCAA ACAGTTTCTC ATTGACCATT CTAAGGAAAT TCTGCGAAGC 
AAGGACGTTA AATTGATTTT GACCCCGTTT ATCAATGCGA TGTCTACAAA AGCTGAATTT 
TCGGCGCTGA ACGATCATTT GCATAGGAAC CTTCCATCCT CAATGGTTTC TGGCTTATCA 
TCCACGTTGG AGTCTGGTTT AGATAGAGTG AATTGGCGAA ATAACTTGTA CTTTGATCTG 
CTTAAAGCCA TTCGAGATTT TACTCTGGAT GATGGTCCCA AAAACAGTTC TGATTCGGAC 
TCCAATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_648488.1
CDS	1..2889
Translation	MLLKILVLFCTLLSAKLAESFVKPLRYNLTILTRLGSEDEQNQFEGIVSIDIEATQPTRVIYLNSLNITISRQRTWIYRWASGRKIGALQIKRIIKKTSLIKIVIELPLRSGEIYTLNMLFSGNLDRSQQYGYFAGYYDKTPRVFYSATRLEPDYAHTVFPCFDDPRFRTPYNITLVHDRKYVALSNMPPVEEKPYKEIENYVSTTFMGSPPLATQQVMWTLHQLEKVYSGPAAAGENITVWSRPHLAEKLAKVPEMTPNLFSKYETLFAYPLPKGADWGGKVDHVVLPRYTEMYSGQGIMVYGEDIVDSGQNGLESLQETLAELVARQWNGLLVNLEDSDEEYVRNGINYYLSVQVMAMDKEAYNTTHLSKTRLDVLYHDSLAKVKSIATDVKESGHQKLRKKKMCLLIHMLKVALGDKLFLKGLQEFFKRYANSSASSKELWEEFQRGARRSHQLPTGVSLPTVMESWMKQPGFPLLTVQRDDAKQIVTITQSRYYQKYLDNSSNDCWWVPVAYIVRNLTLPQVEWLGCQKNSRDILELSHIANPEDWLLINVDAAVPLRVFYDSYNLQLISEALRQDFTQIPELSRIQLVDDALSLSWSGRLPYNVTLNVISYLSNETSVLVWETALLNLEKLQSIMRMTTGFRIFKLYMQKLIEPAFKTTLNSLSTKARTGSEIPINTKSPVTTESSGTTESPDTTESPDTAESPDTTESSNTTESPDTTESSDTTESPDTTKSDLSLSAILYRLACQFEIKECLTDAQQRFQAAMDQKSSSSIPEEIREIVLCRGIRNGLEVHWIMVRDMFFESENDKERSILLNSLSCTTEYWAMQKLLSWALDSKKVPRTMTASLLSAVLRSPLGYYVGKQFLIDHSKEILRSKDVKLILTPFINAMSTKAEFSALNDHLHRNLPSSMVSGLSSTLESGLDRVNWRNNLYFDLLKAIRDFTLDDGPKNSSDSDSN

Target ORF information:

RefSeq Version	NM_140231.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein (CG6071), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_140231.2

ORF Insert Sequence:

ATGTTGCTTA AAATACTTGT ATTGTTTTGC ACATTATTAT CGGCAAAATT GGCAGAATCC 
TTTGTGAAAC CACTGCGCTA TAATTTGACA ATTCTTACGC GCCTGGGGAG TGAAGATGAG 
CAGAACCAGT TTGAGGGCAT CGTGTCCATC GATATTGAAG CGACACAACC AACTCGCGTC 
ATCTATTTAA ATTCTCTCAA CATAACAATA TCTAGACAAA GAACATGGAT ATACCGATGG 
GCTAGCGGCA GAAAAATCGG TGCTCTCCAG ATAAAGAGAA TTATTAAAAA GACCAGCTTA 
ATTAAGATAG TAATCGAACT CCCACTCAGA AGTGGCGAGA TATACACACT CAACATGTTA 
TTCTCGGGTA ACCTAGATCG GAGTCAGCAA TATGGCTACT TTGCCGGCTA CTACGACAAA 
ACGCCGAGGG TTTTCTACTC CGCGACTCGC TTGGAACCGG ACTATGCTCA CACCGTGTTT 
CCCTGCTTCG ATGACCCACG CTTTCGGACC CCATATAACA TAACATTAGT GCACGACCGG 
AAATACGTTG CACTCAGCAA TATGCCACCC GTAGAGGAGA AACCATACAA GGAGATCGAA 
AACTATGTGT CGACGACATT TATGGGTTCA CCACCGCTAG CCACACAGCA GGTCATGTGG 
ACTCTTCATC AATTAGAGAA AGTTTACAGT GGTCCTGCGG CTGCGGGTGA GAATATCACC 
GTCTGGTCAC GGCCGCACTT GGCAGAGAAA CTGGCGAAGG TGCCGGAAAT GACGCCCAAT 
TTGTTTAGTA AATACGAAAC CTTGTTCGCA TATCCATTGC CAAAAGGAGC AGATTGGGGT 
GGTAAGGTCG ATCATGTAGT GTTGCCTAGA TATACAGAAA TGTATAGCGG TCAGGGCATA 
ATGGTGTACG GCGAGGATAT CGTGGACTCA GGACAAAACG GTCTTGAAAG CCTGCAGGAA 
ACGCTTGCGG AGCTGGTAGC GCGGCAATGG AACGGATTGC TGGTGAACCT CGAAGATTCG 
GATGAAGAAT ATGTGCGGAA CGGCATTAAC TACTATCTGA GCGTCCAGGT GATGGCCATG 
GACAAAGAGG CGTATAACAC GACTCACCTT TCAAAAACGC GTCTAGATGT TTTGTATCAT 
GATTCCTTGG CCAAAGTAAA ATCGATCGCT ACCGATGTGA AGGAATCCGG ACACCAGAAA 
CTCCGCAAAA AGAAAATGTG TCTGCTCATC CACATGCTAA AGGTGGCCCT CGGTGATAAG 
TTGTTCTTGA AGGGACTGCA AGAGTTCTTT AAGCGATACG CCAACTCATC TGCTTCATCC 
AAGGAACTGT GGGAGGAGTT CCAGCGAGGG GCACGCCGAA GTCACCAACT GCCCACCGGT 
GTGAGTTTAC CCACTGTGAT GGAGTCATGG ATGAAGCAAC CAGGTTTCCC GCTACTCACC 
GTCCAGCGCG ACGATGCGAA GCAAATTGTG ACCATAACGC AGAGTCGCTA TTATCAGAAA 
TATTTGGACA ACAGTTCCAA TGACTGCTGG TGGGTCCCGG TCGCTTACAT CGTCAGGAAT 
CTTACGTTGC CTCAGGTGGA GTGGCTCGGC TGTCAGAAAA ATAGTAGAGA TATATTGGAA 
CTCAGCCACA TCGCTAATCC GGAGGATTGG CTATTAATAA ATGTGGATGC TGCAGTTCCT 
CTTCGCGTCT TCTACGATTC ATACAACTTG CAGCTGATCA GTGAGGCTCT GCGTCAGGAT 
TTCACCCAGA TTCCGGAGCT TAGTCGCATC CAGTTGGTCG ATGATGCCCT CAGTCTATCG 
TGGTCAGGTC GGTTGCCGTA TAACGTCACC TTAAACGTGA TCTCATATCT TTCGAATGAG 
ACCAGCGTTT TGGTTTGGGA AACAGCGCTT TTGAATTTGG AGAAGCTACA GAGTATCATG 
CGAATGACTA CGGGCTTTCG TATCTTTAAG CTTTACATGC AGAAACTTAT TGAGCCAGCT 
TTTAAAACAA CATTAAATTC CCTCTCAACA AAAGCCAGAA CTGGTTCGGA AATACCGATC 
AATACGAAAT CGCCGGTCAC CACGGAGTCC TCGGGCACCA CAGAATCCCC GGACACCACG 
GAATCCCCGG ACACCGCGGA ATCCCCGGAC ACCACGGAAT CCTCGAACAC CACAGAATCC 
CCGGACACCA CGGAATCCTC GGACACCACA GAATCCCCGG ACACCACCAA ATCGGATTTG 
TCGTTGTCGG CGATTTTATA CCGGCTGGCG TGTCAGTTCG AAATCAAGGA ATGCCTAACG 
GACGCACAGC AGCGATTTCA GGCGGCGATG GACCAGAAAT CTAGCTCATC CATTCCGGAG 
GAGATTCGGG AAATCGTGCT CTGCAGGGGC ATTCGTAACG GCTTGGAGGT TCATTGGATA 
ATGGTGCGGG ATATGTTCTT TGAGTCCGAG AATGATAAGG AGAGGAGTAT CCTTCTAAAT 
TCTCTCAGCT GCACCACGGA GTATTGGGCG ATGCAGAAGT TGCTCAGCTG GGCGCTTGAC 
TCAAAAAAGG TTCCAAGAAC GATGACAGCC AGTCTTCTGA GCGCCGTTTT GAGATCCCCA 
TTGGGCTACT ATGTGGGCAA ACAGTTTCTC ATTGACCATT CTAAGGAAAT TCTGCGAAGC 
AAGGACGTTA AATTGATTTT GACCCCGTTT ATCAATGCGA TGTCTACAAA AGCTGAATTT 
TCGGCGCTGA ACGATCATTT GCATAGGAAC CTTCCATCCT CAATGGTTTC TGGCTTATCA 
TCCACGTTGG AGTCTGGTTT AGATAGAGTG AATTGGCGAA ATAACTTGTA CTTTGATCTG 
CTTAAAGCCA TTCGAGATTT TACTCTGGAT GATGGTCCCA AAAACAGTTC TGATTCGGAC 
TCCAATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG6071 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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