CG6418 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG6418
Entrez Gene ID	39218
Full Name	CG6418 gene product from transcript CG6418-RB
Synonyms	DmRH27,Dmel\CG6418,cg6418
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3L Map Location: 67F1-67F1

mRNA and Protein(s)

mRNA	Protein	Name
NM_140156.3	NP_648413.1	uncharacterized protein

Pathways from BioSystems

Homologies

Mus musculus (house mouse)	Ddx42	NP_082350.3
Rattus norvegicus (Norway rat)	Ddx42	NP_001100529.1
Caenorhabditis elegans (roundworm)	C46F11.4	NP_497743.1
Canis lupus familiaris (dog)	DDX42	XP_537598.3
Danio rerio (zebrafish)	ddx42	NP_001032894.2
Homo sapiens (human)	DDX42	NP_031398.2
Pan troglodytes (chimpanzee)	DDX42	XP_001147880.1
Bos taurus (cattle)	DDX42	XP_003587506.2
Arabidopsis thaliana (thale cress)	AT2G47330	NP_566099.1
Xenopus tropicalis (tropical clawed frog)	ddx42	XP_004918655.1
	DDX42	XP_001116381.1
Drosophila melanogaster (fruit fly)	CG6418	NP_648413.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP012523	XP_306246.4
Gallus gallus (chicken)	DDX42	NP_001026097.1
Oryza sativa (rice)	Os03g0308500	NP_001049904.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG6418 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG6418 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa18180	NM_140156.3 Latest version!	Drosophila melanogaster uncharacterized protein (CG6418), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG6418 ( NM_140156.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_648413.1 Drosophila melanogaster uncharacterized protein (CG6418), mRNA.

Price & Availability↑

CloneID	OFa18180
Clone ID Related Accession (Same CDS sequence)	NM_140156.3
Accession Version	NM_140156.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2376bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_140156.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAGTGGAT ATCGAGGCAT TGGCGGTGGG GGCTTCCCCT ACCGCAAGCC AGCAAGTTCC 
GGCAACAACA TGAACGCCGT ACCGCCGCCC CCGATGCTGA ATGCCCGTGG CTATTCTGGT 
TCCCGCGGAG GATTTGGAGG AGCAAGCCGT GGCGGTGTCA CCGGGAGCAC TACATCAACG 
TCCAAGCACG GCTACTCCAC CTTGGACTCC ATCAGCCAGT ACACCAATGC CACCAATCTG 
GTTGGCAAAA GGAAGCACCA CACGGACGAT GACTATTTCG ATGATGACGA TGAGCCCCGG 
GAAAAGGAGA TAGAACAAGC CTATATACCG GCACCAGGAT CCCCGGGAGC TCCGCCAACG 
TCGGCCAAAA AGCAAGAGGA TTCCGATTCG GATGAGGATC CCCTCGAGCA GTTCATGGCG 
GGCATCAACC AGCAGGTGGA GAAGGAGAAG CGTCAACAAG CACCTAAGCC GCCAACTCAG 
GCGGTGAGAG GTGACATCGA TGACGAGGAC GATGAGGAGA GCTACTATCG CTACATGAAG 
GAGAATCCCA ATGCTGGACT TCGCGACGAG GGATCCGATC AGGAAATCGA ATACGATGAG 
GATGGCAATC CCATAGCCCC ACCGAAGAAA AAGGACATTG ATCCTCTGCC GCCCATCTAC 
CATTCCGAAA TCGAGTACGA ACCCTTCGAG AAGAACTTCT ACACGCAGCA TGACGACATA 
GCCGCCCTGG ATGATGAGCA AGTCCGGGAA TTAAGGCGCA CACTTGGCGT AAAGGTCACT 
GGTCCATCAC CACCCAAACC AGTCACGTCC TTCGGCCATT TCGGCTTTGA TGAGCAACTC 
ATCAAGGCCG TGAGGAAAGC GGAGTATACA CAGCCCACAC CCATCCAGGC ACAAGCAGTG 
CCCACCGCCC TGTCCGGCAG AGACATCATT GGCATAGCCA AAACTGGTTC CGGTAAGACA 
GCAGCTTTCA TCTGGCCGAT GCTAATGCAT GTGATGGATC AGAAACAGCT GAAGCCAGGC 
GACGGACCCA TAGGACTTAT CCTAGCACCT ACACGCGAGC TTTCCCTGCA GATCTACAAC 
GAGGCCAAGA AGTTTGGCAA GGTCTACAAC CTGAACGTGG TCTGCTGCTA CGGCGGAGGC 
TCCAAATGGG AGCAAAGTAA AGCTCTGGAA CAGGGAGCGG AAATTATTGT GGCCACGCCA 
GGACGTATGA TAGATATGGT CAAGATGAAG GCCACCAATC TGAGGAGGGT CACTTTCCTA 
GTGCTTGACG AGGCCGACCG TATGTTCCAC ATGGGCTTTG AGCCCCAGGT TCGCTCCATC 
TGCAACCACG TGCGTCCAGA TCGTCAATGC CTAATGTTTT CGGCCACCTT TAAGAAGCGA 
ATTGAACGTC TGGCCAGAGA TGTGCTTTCC GATCCCGTGA GAATAGTGCA GGGAGACCTG 
AACGAGGCCA ATCAGGACAT TACACAGTCT GTGTACGTCT TCCCCAATCC CCTGCAGAAA 
TGGAATTGGC TGCTGTGCCA TCTGGTGAAG TTCCTTTCCG AAGGAAGTGT CCTGATCTTT 
GTGACTAAAA AAGTAGATGC TGAAACGGTG TCTAACAATC TTTTAATTAA GGAGTACAAT 
TGTCTTTTAC TCCACGGCGA TATGGACCAA GCGGACAGAA ACAAGGTCAT CACTCAGTTT 
AAGAGAAAAG AGTGCGATAT TCTAGTGGCC ACCGACGTGG CAGCCAGAGG ATTGGATATA 
CCCCATATTA GGAATGTGGT AAACTACGAC ACAGCCAGGG ACATTGAAAC CCACACGCAC 
AGAATTGGAA GAACGGGCAG AGCCGGTGAA AAGGGTAATG CATACACTCT AGTCACCGAT 
AAGGACAAGG AGTTCGCCGG ACATCTGGTG CGTAACTTGG AGGGAGCCGA TCAGCTGGTG 
CCCGACGATC TGATGGAGCT GGCCATGAAG AGTTCCTGGT TCCGCAGCTC ACGCTTCAAG 
CAGGGCAAAG GCAAGAGACC AACAAATACC CACACAGGAT TGGGCTATCG GGAGAAAGGA 
AATGGAGGTG GTGGCTATGG TTCGGCTGGT GGCTCGGAGT CCACTGCGAG TGTGTCTGCC 
CACAGTCCTT CCGACGGACC CTCTAGCAAA GCCTTTTCGA GCTCGGGACC AGCCACAGAT 
CGCTATACAG CAATGAGGGA GGCATTCCGA TCCCAGTATA ACAATCAGTT CCGTGCGTCC 
AGCGATCGCA CTTGGGAGAA AACTCTGCCG GAGTCGGGAG TTTTCGCTGC GCCAATGGCA 
CCGCCCTCAT CATCAACACA GGGTGCTTCC GCCTCATCGG CCAACAACAG CAGCAACCAG 
GATGCCAAAA GAGCCAAGAA GAGTCGCTGG AATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_648413.1
CDS	93..2468
Translation	MSGYRGIGGGGFPYRKPASSGNNMNAVPPPPMLNARGYSGSRGGFGGASRGGVTGSTTSTSKHGYSTLDSISQYTNATNLVGKRKHHTDDDYFDDDDEPREKEIEQAYIPAPGSPGAPPTSAKKQEDSDSDEDPLEQFMAGINQQVEKEKRQQAPKPPTQAVRGDIDDEDDEESYYRYMKENPNAGLRDEGSDQEIEYDEDGNPIAPPKKKDIDPLPPIYHSEIEYEPFEKNFYTQHDDIAALDDEQVRELRRTLGVKVTGPSPPKPVTSFGHFGFDEQLIKAVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQLKPGDGPIGLILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIVATPGRMIDMVKMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQCLMFSATFKKRIERLARDVLSDPVRIVQGDLNEANQDITQSVYVFPNPLQKWNWLLCHLVKFLSEGSVLIFVTKKVDAETVSNNLLIKEYNCLLLHGDMDQADRNKVITQFKRKECDILVATDVAARGLDIPHIRNVVNYDTARDIETHTHRIGRTGRAGEKGNAYTLVTDKDKEFAGHLVRNLEGADQLVPDDLMELAMKSSWFRSSRFKQGKGKRPTNTHTGLGYREKGNGGGGYGSAGGSESTASVSAHSPSDGPSSKAFSSSGPATDRYTAMREAFRSQYNNQFRASSDRTWEKTLPESGVFAAPMAPPSSSTQGASASSANNSSNQDAKRAKKSRWN

Target ORF information:

RefSeq Version	NM_140156.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein (CG6418), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_140156.3

ORF Insert Sequence:

ATGAGTGGAT ATCGAGGCAT TGGCGGTGGG GGCTTCCCCT ACCGCAAGCC AGCAAGTTCC 
GGCAACAACA TGAACGCCGT ACCGCCGCCC CCGATGCTGA ATGCCCGTGG CTATTCTGGT 
TCCCGCGGAG GATTTGGAGG AGCAAGCCGT GGCGGTGTCA CCGGGAGCAC TACATCAACG 
TCCAAGCACG GCTACTCCAC CTTGGACTCC ATCAGCCAGT ACACCAATGC CACCAATCTG 
GTTGGCAAAA GGAAGCACCA CACGGACGAT GACTATTTCG ATGATGACGA TGAGCCCCGG 
GAAAAGGAGA TAGAACAAGC CTATATACCG GCACCAGGAT CCCCGGGAGC TCCGCCAACG 
TCGGCCAAAA AGCAAGAGGA TTCCGATTCG GATGAGGATC CCCTCGAGCA GTTCATGGCG 
GGCATCAACC AGCAGGTGGA GAAGGAGAAG CGTCAACAAG CACCTAAGCC GCCAACTCAG 
GCGGTGAGAG GTGACATCGA TGACGAGGAC GATGAGGAGA GCTACTATCG CTACATGAAG 
GAGAATCCCA ATGCTGGACT TCGCGACGAG GGATCCGATC AGGAAATCGA ATACGATGAG 
GATGGCAATC CCATAGCCCC ACCGAAGAAA AAGGACATTG ATCCTCTGCC GCCCATCTAC 
CATTCCGAAA TCGAGTACGA ACCCTTCGAG AAGAACTTCT ACACGCAGCA TGACGACATA 
GCCGCCCTGG ATGATGAGCA AGTCCGGGAA TTAAGGCGCA CACTTGGCGT AAAGGTCACT 
GGTCCATCAC CACCCAAACC AGTCACGTCC TTCGGCCATT TCGGCTTTGA TGAGCAACTC 
ATCAAGGCCG TGAGGAAAGC GGAGTATACA CAGCCCACAC CCATCCAGGC ACAAGCAGTG 
CCCACCGCCC TGTCCGGCAG AGACATCATT GGCATAGCCA AAACTGGTTC CGGTAAGACA 
GCAGCTTTCA TCTGGCCGAT GCTAATGCAT GTGATGGATC AGAAACAGCT GAAGCCAGGC 
GACGGACCCA TAGGACTTAT CCTAGCACCT ACACGCGAGC TTTCCCTGCA GATCTACAAC 
GAGGCCAAGA AGTTTGGCAA GGTCTACAAC CTGAACGTGG TCTGCTGCTA CGGCGGAGGC 
TCCAAATGGG AGCAAAGTAA AGCTCTGGAA CAGGGAGCGG AAATTATTGT GGCCACGCCA 
GGACGTATGA TAGATATGGT CAAGATGAAG GCCACCAATC TGAGGAGGGT CACTTTCCTA 
GTGCTTGACG AGGCCGACCG TATGTTCCAC ATGGGCTTTG AGCCCCAGGT TCGCTCCATC 
TGCAACCACG TGCGTCCAGA TCGTCAATGC CTAATGTTTT CGGCCACCTT TAAGAAGCGA 
ATTGAACGTC TGGCCAGAGA TGTGCTTTCC GATCCCGTGA GAATAGTGCA GGGAGACCTG 
AACGAGGCCA ATCAGGACAT TACACAGTCT GTGTACGTCT TCCCCAATCC CCTGCAGAAA 
TGGAATTGGC TGCTGTGCCA TCTGGTGAAG TTCCTTTCCG AAGGAAGTGT CCTGATCTTT 
GTGACTAAAA AAGTAGATGC TGAAACGGTG TCTAACAATC TTTTAATTAA GGAGTACAAT 
TGTCTTTTAC TCCACGGCGA TATGGACCAA GCGGACAGAA ACAAGGTCAT CACTCAGTTT 
AAGAGAAAAG AGTGCGATAT TCTAGTGGCC ACCGACGTGG CAGCCAGAGG ATTGGATATA 
CCCCATATTA GGAATGTGGT AAACTACGAC ACAGCCAGGG ACATTGAAAC CCACACGCAC 
AGAATTGGAA GAACGGGCAG AGCCGGTGAA AAGGGTAATG CATACACTCT AGTCACCGAT 
AAGGACAAGG AGTTCGCCGG ACATCTGGTG CGTAACTTGG AGGGAGCCGA TCAGCTGGTG 
CCCGACGATC TGATGGAGCT GGCCATGAAG AGTTCCTGGT TCCGCAGCTC ACGCTTCAAG 
CAGGGCAAAG GCAAGAGACC AACAAATACC CACACAGGAT TGGGCTATCG GGAGAAAGGA 
AATGGAGGTG GTGGCTATGG TTCGGCTGGT GGCTCGGAGT CCACTGCGAG TGTGTCTGCC 
CACAGTCCTT CCGACGGACC CTCTAGCAAA GCCTTTTCGA GCTCGGGACC AGCCACAGAT 
CGCTATACAG CAATGAGGGA GGCATTCCGA TCCCAGTATA ACAATCAGTT CCGTGCGTCC 
AGCGATCGCA CTTGGGAGAA AACTCTGCCG GAGTCGGGAG TTTTCGCTGC GCCAATGGCA 
CCGCCCTCAT CATCAACACA GGGTGCTTCC GCCTCATCGG CCAACAACAG CAGCAACCAG 
GATGCCAAAA GAGCCAAGAA GAGTCGCTGG AATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG6418 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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