CG3552 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG3552
Entrez Gene ID	39097
Full Name	CG3552 gene product from transcript CG3552-RD
Synonyms	Dmel\CG3552
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3L Map Location: 67B8-67B8

mRNA and Protein(s)

mRNA	Protein	Name
NM_140062.2	NP_648319.1	uncharacterized protein, isoform A
NM_001144454.3	NP_001137926.1	uncharacterized protein, isoform D

Pathways from BioSystems

Homologies

	GDPGP1	XP_002804985.1
Arabidopsis thaliana (thale cress)	VTC2	NP_567759.1
Gallus gallus (chicken)	LOC100858151	XP_003641882.1
Drosophila melanogaster (fruit fly)	CG3552	NP_648319.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP000740	XP_311278.4
Pan troglodytes (chimpanzee)	GDPGP1	XP_003952778.1
Canis lupus familiaris (dog)	GDPGP1	XP_005618423.1
Mus musculus (house mouse)	Gdpgp1	NP_848867.2
Danio rerio (zebrafish)	zgc:153343	NP_001071021.1
Homo sapiens (human)	GDPGP1	NP_001013679.2
Bos taurus (cattle)	GDPGP1	NP_001015629.1
Rattus norvegicus (Norway rat)	Gdpgp1	XP_006229516.1
Caenorhabditis elegans (roundworm)	mcp-1	NP_001023638.1
Arabidopsis thaliana (thale cress)	VTC5	NP_200323.1
Danio rerio (zebrafish)	LOC100332718	XP_002666833.1
Oryza sativa (rice)	Os12g0190000	NP_001066338.1
Xenopus tropicalis (tropical clawed frog)	gdpgp1	NP_001072398.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG3552 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG3552 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa18045	NM_140062.2 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant A (CG3552), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
OFa18045	NM_001144454.3 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant D (CG3552), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG3552 ( NM_140062.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_648319.1 Drosophila melanogaster uncharacterized protein, transcript variant A (CG3552), mRNA.

Price & Availability↑

CloneID	OFa18045
Clone ID Related Accession (Same CDS sequence)	NM_140062.2 , NM_001144454.3
Accession Version	NM_140062.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1227bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Dec 17, 2009 this sequence version replaced NM_140062.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGTTTTCGC GGCATTTCGC AGCCTTCTTT CGATTCAACC GATATGTTGC CCAAAAATAC 
AGCAGTTTTA TAGCCGCCGG CTTTAGCAAC AGGTTTTCGC TGAAGGTTGC AACTCTGCTG 
CCGCTGGTAG TCCTCCGATC CGCGGATTGC AGGCAAAAAG AGGACCAGGA GGTAAAGCGA 
CCGGTCCGTA GGCGAACCAT GAGCAAGGTT AAGTACGAGA CGAGTCTGGA GGGGAGGGCG 
CAGCTCTATC TCAACGCCAT GAAGGTGAGA TGGGACCAGC TGCACAAGGT GCCCGGGCTG 
TTTTCATATC AATTGGAGAA ATCCCCTCAG AGCCGGAAAA TACCAGGATA CTGGGGCTTC 
TATGCGGAGC TTAATTCAGA TCGAAACCGT AAGCGCCGAC GTCCCCAGAC CATCGAGAGC 
CTCAATCCCA CCTTTAAGCA CATGATGTTC AACTTCAATA AAGTCGATGC CCAGGAGGTG 
ATCATGACCA TTGATGATGC ACACGGCAGT CCCGAAGTTC AGATGATCAT AAACAAGAGC 
CCAATCACCA AATATCATAC TTTGATCTGC CCGGAAGTAG GTAAAAACCA TACCCAACGG 
ATTACCCGTG ACGCTCTTCA GTTCTGCATC ACCTTTATGC GAAATATCGA TGATAAGGAT 
ATGCGGATGG GTTATAATAG CCCTGGAGCG CTGGCATCTG TAAATCACCT TCACTTTCAT 
CTTCTCCACA TGCCCCAGGA TTTATATATA GACCATGTTC CCTTGGATGA GCTGGCCGGT 
GGCTATGTTT ATCGTTTGAG CCGTAGGGCG CCAACGGAAG GAATATGTAT AGTATTTAAC 
GAAAACGATA GTGATGAACA GGTGGCGGAG AAAGTGGACC AGCTCTACAT GCTCGCCATG 
TGGATGTGCA AGAACAATAT GCCACACAAT CTGTTCCTCA CCCAGGATCG GAGACCCGGA 
AAAAGCGGTA ATATTAAGGT ATTCGTATTT GCCCGCTCCG AGTACTGTGT AAACAAGGAT 
TTGGCCGAGT TTAATGTCGG TTTCTGTGAG TTGGCTGGTT ACATTCCCTT GCCAGATGCT 
GATAAAATGG AGAACCTTAC AGAGCTTCAG GTGCTATTTA GGATTCGAAC AATAACTGGC 
AATGCTCCAA AGGCTGTGTA CGAGCAAATT ACGAGTATGG TCGAAGGACA AGAATACTAT 
CTTTGGGACC AACCATTGAC GATATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_648319.1
CDS	78..1304
Translation	MFSRHFAAFFRFNRYVAQKYSSFIAAGFSNRFSLKVATLLPLVVLRSADCRQKEDQEVKRPVRRRTMSKVKYETSLEGRAQLYLNAMKVRWDQLHKVPGLFSYQLEKSPQSRKIPGYWGFYAELNSDRNRKRRRPQTIESLNPTFKHMMFNFNKVDAQEVIMTIDDAHGSPEVQMIINKSPITKYHTLICPEVGKNHTQRITRDALQFCITFMRNIDDKDMRMGYNSPGALASVNHLHFHLLHMPQDLYIDHVPLDELAGGYVYRLSRRAPTEGICIVFNENDSDEQVAEKVDQLYMLAMWMCKNNMPHNLFLTQDRRPGKSGNIKVFVFARSEYCVNKDLAEFNVGFCELAGYIPLPDADKMENLTELQVLFRIRTITGNAPKAVYEQITSMVEGQEYYLWDQPLTI

Target ORF information:

RefSeq Version	NM_140062.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant A (CG3552), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_140062.2

ORF Insert Sequence:

ATGTTTTCGC GGCATTTCGC AGCCTTCTTT CGATTCAACC GATATGTTGC CCAAAAATAC 
AGCAGTTTTA TAGCCGCCGG CTTTAGCAAC AGGTTTTCGC TGAAGGTTGC AACTCTGCTG 
CCGCTGGTAG TCCTCCGATC CGCGGATTGC AGGCAAAAAG AGGACCAGGA GGTAAAGCGA 
CCGGTCCGTA GGCGAACCAT GAGCAAGGTT AAGTACGAGA CGAGTCTGGA GGGGAGGGCG 
CAGCTCTATC TCAACGCCAT GAAGGTGAGA TGGGACCAGC TGCACAAGGT GCCCGGGCTG 
TTTTCATATC AATTGGAGAA ATCCCCTCAG AGCCGGAAAA TACCAGGATA CTGGGGCTTC 
TATGCGGAGC TTAATTCAGA TCGAAACCGT AAGCGCCGAC GTCCCCAGAC CATCGAGAGC 
CTCAATCCCA CCTTTAAGCA CATGATGTTC AACTTCAATA AAGTCGATGC CCAGGAGGTG 
ATCATGACCA TTGATGATGC ACACGGCAGT CCCGAAGTTC AGATGATCAT AAACAAGAGC 
CCAATCACCA AATATCATAC TTTGATCTGC CCGGAAGTAG GTAAAAACCA TACCCAACGG 
ATTACCCGTG ACGCTCTTCA GTTCTGCATC ACCTTTATGC GAAATATCGA TGATAAGGAT 
ATGCGGATGG GTTATAATAG CCCTGGAGCG CTGGCATCTG TAAATCACCT TCACTTTCAT 
CTTCTCCACA TGCCCCAGGA TTTATATATA GACCATGTTC CCTTGGATGA GCTGGCCGGT 
GGCTATGTTT ATCGTTTGAG CCGTAGGGCG CCAACGGAAG GAATATGTAT AGTATTTAAC 
GAAAACGATA GTGATGAACA GGTGGCGGAG AAAGTGGACC AGCTCTACAT GCTCGCCATG 
TGGATGTGCA AGAACAATAT GCCACACAAT CTGTTCCTCA CCCAGGATCG GAGACCCGGA 
AAAAGCGGTA ATATTAAGGT ATTCGTATTT GCCCGCTCCG AGTACTGTGT AAACAAGGAT 
TTGGCCGAGT TTAATGTCGG TTTCTGTGAG TTGGCTGGTT ACATTCCCTT GCCAGATGCT 
GATAAAATGG AGAACCTTAC AGAGCTTCAG GTGCTATTTA GGATTCGAAC AATAACTGGC 
AATGCTCCAA AGGCTGTGTA CGAGCAAATT ACGAGTATGG TCGAAGGACA AGAATACTAT 
CTTTGGGACC AACCATTGAC GATATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CG3552 ( NM_001144454.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001137926.1 Drosophila melanogaster uncharacterized protein, transcript variant D (CG3552), mRNA.

Price & Availability↑

CloneID	OFa18045
Clone ID Related Accession (Same CDS sequence)	NM_140062.2 , NM_001144454.3
Accession Version	NM_001144454.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1227bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform D
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_001144454.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGTTTTCGC GGCATTTCGC AGCCTTCTTT CGATTCAACC GATATGTTGC CCAAAAATAC 
AGCAGTTTTA TAGCCGCCGG CTTTAGCAAC AGGTTTTCGC TGAAGGTTGC AACTCTGCTG 
CCGCTGGTAG TCCTCCGATC CGCGGATTGC AGGCAAAAAG AGGACCAGGA GGTAAAGCGA 
CCGGTCCGTA GGCGAACCAT GAGCAAGGTT AAGTACGAGA CGAGTCTGGA GGGGAGGGCG 
CAGCTCTATC TCAACGCCAT GAAGGTGAGA TGGGACCAGC TGCACAAGGT GCCCGGGCTG 
TTTTCATATC AATTGGAGAA ATCCCCTCAG AGCCGGAAAA TACCAGGATA CTGGGGCTTC 
TATGCGGAGC TTAATTCAGA TCGAAACCGT AAGCGCCGAC GTCCCCAGAC CATCGAGAGC 
CTCAATCCCA CCTTTAAGCA CATGATGTTC AACTTCAATA AAGTCGATGC CCAGGAGGTG 
ATCATGACCA TTGATGATGC ACACGGCAGT CCCGAAGTTC AGATGATCAT AAACAAGAGC 
CCAATCACCA AATATCATAC TTTGATCTGC CCGGAAGTAG GTAAAAACCA TACCCAACGG 
ATTACCCGTG ACGCTCTTCA GTTCTGCATC ACCTTTATGC GAAATATCGA TGATAAGGAT 
ATGCGGATGG GTTATAATAG CCCTGGAGCG CTGGCATCTG TAAATCACCT TCACTTTCAT 
CTTCTCCACA TGCCCCAGGA TTTATATATA GACCATGTTC CCTTGGATGA GCTGGCCGGT 
GGCTATGTTT ATCGTTTGAG CCGTAGGGCG CCAACGGAAG GAATATGTAT AGTATTTAAC 
GAAAACGATA GTGATGAACA GGTGGCGGAG AAAGTGGACC AGCTCTACAT GCTCGCCATG 
TGGATGTGCA AGAACAATAT GCCACACAAT CTGTTCCTCA CCCAGGATCG GAGACCCGGA 
AAAAGCGGTA ATATTAAGGT ATTCGTATTT GCCCGCTCCG AGTACTGTGT AAACAAGGAT 
TTGGCCGAGT TTAATGTCGG TTTCTGTGAG TTGGCTGGTT ACATTCCCTT GCCAGATGCT 
GATAAAATGG AGAACCTTAC AGAGCTTCAG GTGCTATTTA GGATTCGAAC AATAACTGGC 
AATGCTCCAA AGGCTGTGTA CGAGCAAATT ACGAGTATGG TCGAAGGACA AGAATACTAT 
CTTTGGGACC AACCATTGAC GATATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001137926.1
CDS	311..1537
Translation	MFSRHFAAFFRFNRYVAQKYSSFIAAGFSNRFSLKVATLLPLVVLRSADCRQKEDQEVKRPVRRRTMSKVKYETSLEGRAQLYLNAMKVRWDQLHKVPGLFSYQLEKSPQSRKIPGYWGFYAELNSDRNRKRRRPQTIESLNPTFKHMMFNFNKVDAQEVIMTIDDAHGSPEVQMIINKSPITKYHTLICPEVGKNHTQRITRDALQFCITFMRNIDDKDMRMGYNSPGALASVNHLHFHLLHMPQDLYIDHVPLDELAGGYVYRLSRRAPTEGICIVFNENDSDEQVAEKVDQLYMLAMWMCKNNMPHNLFLTQDRRPGKSGNIKVFVFARSEYCVNKDLAEFNVGFCELAGYIPLPDADKMENLTELQVLFRIRTITGNAPKAVYEQITSMVEGQEYYLWDQPLTI

Target ORF information:

RefSeq Version	NM_001144454.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant D (CG3552), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001144454.3

ORF Insert Sequence:

ATGTTTTCGC GGCATTTCGC AGCCTTCTTT CGATTCAACC GATATGTTGC CCAAAAATAC 
AGCAGTTTTA TAGCCGCCGG CTTTAGCAAC AGGTTTTCGC TGAAGGTTGC AACTCTGCTG 
CCGCTGGTAG TCCTCCGATC CGCGGATTGC AGGCAAAAAG AGGACCAGGA GGTAAAGCGA 
CCGGTCCGTA GGCGAACCAT GAGCAAGGTT AAGTACGAGA CGAGTCTGGA GGGGAGGGCG 
CAGCTCTATC TCAACGCCAT GAAGGTGAGA TGGGACCAGC TGCACAAGGT GCCCGGGCTG 
TTTTCATATC AATTGGAGAA ATCCCCTCAG AGCCGGAAAA TACCAGGATA CTGGGGCTTC 
TATGCGGAGC TTAATTCAGA TCGAAACCGT AAGCGCCGAC GTCCCCAGAC CATCGAGAGC 
CTCAATCCCA CCTTTAAGCA CATGATGTTC AACTTCAATA AAGTCGATGC CCAGGAGGTG 
ATCATGACCA TTGATGATGC ACACGGCAGT CCCGAAGTTC AGATGATCAT AAACAAGAGC 
CCAATCACCA AATATCATAC TTTGATCTGC CCGGAAGTAG GTAAAAACCA TACCCAACGG 
ATTACCCGTG ACGCTCTTCA GTTCTGCATC ACCTTTATGC GAAATATCGA TGATAAGGAT 
ATGCGGATGG GTTATAATAG CCCTGGAGCG CTGGCATCTG TAAATCACCT TCACTTTCAT 
CTTCTCCACA TGCCCCAGGA TTTATATATA GACCATGTTC CCTTGGATGA GCTGGCCGGT 
GGCTATGTTT ATCGTTTGAG CCGTAGGGCG CCAACGGAAG GAATATGTAT AGTATTTAAC 
GAAAACGATA GTGATGAACA GGTGGCGGAG AAAGTGGACC AGCTCTACAT GCTCGCCATG 
TGGATGTGCA AGAACAATAT GCCACACAAT CTGTTCCTCA CCCAGGATCG GAGACCCGGA 
AAAAGCGGTA ATATTAAGGT ATTCGTATTT GCCCGCTCCG AGTACTGTGT AAACAAGGAT 
TTGGCCGAGT TTAATGTCGG TTTCTGTGAG TTGGCTGGTT ACATTCCCTT GCCAGATGCT 
GATAAAATGG AGAACCTTAC AGAGCTTCAG GTGCTATTTA GGATTCGAAC AATAACTGGC 
AATGCTCCAA AGGCTGTGTA CGAGCAAATT ACGAGTATGG TCGAAGGACA AGAATACTAT 
CTTTGGGACC AACCATTGAC GATATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG3552 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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