CG42269 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG42269
Entrez Gene ID	38689
Full Name	CG42269 gene product from transcript CG42269-RE
Synonyms	CG6596,CG6600,Dmel\CG42269,Dmel_CG6596,Dmel_CG6600
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3L Map Location: 65A5-65A5

mRNA and Protein(s)

mRNA	Protein	Name
NM_139762.3	NP_648019.2	uncharacterized protein

Pathways from BioSystems

Homologies

Drosophila melanogaster (fruit fly)	CG42269	NP_648019.2
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP006609	XP_316638.4

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG42269 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG42269 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa17663	NM_139762.3 Latest version!	Drosophila melanogaster uncharacterized protein (CG42269), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG42269 ( NM_139762.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_648019.2 Drosophila melanogaster uncharacterized protein (CG42269), mRNA.

Price & Availability↑

CloneID	OFa17663
Clone ID Related Accession (Same CDS sequence)	NM_139762.3
Accession Version	NM_139762.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1989bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_139762.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGAAGGCC AGGCCAAGCA AGCGTACTTC GTTAATGAAG CATTTACCTA CGAGGAGCCG 
CCACAAGGAG GTGGTGGAGG TGGTGCAGAC GCACTGCATC GCCGGAAAAG CGGCGGTGGC 
AACAAGGAAC TCCAACTGGA CATGGGTGGC TTCAAGAAGG GCCAGGAAAT GGCAGGTGGC 
AATGGCAGTG ATTCGCTGCC GCCTAGCATG GACTTTGATG ACATACTCCC CCTGATCGGG 
GAGTTTGGCC GATATCAGAA GCTACTGTTC ATCTGCATGA TCCCATTCTC GTTTTTCGTG 
GCCTTTGTGT ACTTCTCACA AATATTCCTC ACCTTGATAC CCGAACAGCA TTGGTGTCAT 
GTGCCCGAGT TGGATGGCTT GGATGTGGAG GCCAGACTGG CGCTTTCCAT ACCCATGACC 
AATGGCGAAT ACAACAATTG TTACATGTAC GACGTCAACT ATACGGATAT ACTTGCCCAG 
GGCAAGGTGA TGGCCGATCC CAAGTGGCCG CAGGTCAAGT GCCGCCACGG CTGGTCATAT 
AACTTCACGG AAATACCCTA CGCGACGGTG GCCACCGAGC AGAATTGGGT GTGCGATGAC 
GCCGCCCTGC CCACCTACGC CCAGTCCATA TTCTTTCTGG GCGCCATCGT GGGAGGACTG 
CTCTTTGGCT GGGTGGCGGA TCGGTTTGGT CGTATTCCCG CCCTGATCGG CACCAATATG 
ATGGGTCTCC TGGCCGGCGT GGGCACTGCC TTTGTCAGCA ACTTCTGGGA GTTTGCTATC 
ATGCGATTCT TCGTCGGATT CGCCTTTGAC AACTGCTTCA CAATGATGTA CATATTGGTT 
CTCGAGTACG TTGGTCCCAA GTACCGCACC TTTGTGGCCA ATATGTCGAT CGCTATCTTC 
TTCACTGGAG CCGCCTGCCT TCTTCCCTGG ATTGCCTACT TTTTGGCAGA TTGGAAACTC 
CTGGCCATCG TGACCTCTGC TCCGCTACTT TTGGCTATAT TCACCCCATT CGTGGTACCC 
GAATCAGCTC GTTGGTTAGT CTCCCAGGGA AAAGTGGACA AGGCCGTGGG AATCCTGAAG 
AAACTTGAGA AGGGCAATGG GCGTCAGGTG CCCCCTCAGA CATATCAAAT CTTTACGGAC 
AGCTGTAAGA GGATGCAGGA GCAGGAGGCC CAGAATGGCA AATACTCTGT ACTGGATCTC 
TTTAAGTCAC CAAGATTGCG GCGAACTACT CTGCTGCTTA TTGTTATCTG GATGGCCATA 
TCCCTAGTCT TCGATGGACA TGTGAGGAAT GTGGGATCAC TGGGTTTGGA CATCTTCTTC 
ACCTTCACCC TGGCCTGTTT CACGGAGCTG CCCGCCGATA CTTTGCTTAC GGTGATCCTG 
GATCGGTTCG GACGCCGTTG GTTGGCCTGC AGCTCCATGG TCCTTAGTGG AGTGTTCAGC 
TTATTGGCCA CTGTGGTGCC CGTGGGCATA TACTCCGCTG CCTTGGCCAT CATGGGTCGA 
TTCTTTGTAA ACATTAGCTA TAATATTGGT TTGCAATGGG CGGCGGAGGT CCTGCCCACT 
GTGGTTAGGG CGCAGGCAGT GGCCTTCATC CATATCATGG GTTATGTGGC CAGCATCATA 
GCACCATTTG TGGTTTATCT GGCCAACATT TCCCAAGCCC TGCCACTGAT TATCCTTGGA 
ATTTTAGGAA TTATTGGTGG CTTATTGGCG CTCCTACTGC CGGAGACCCT AAATCATGTC 
CTGCCACAAA CCCTTAGCGA CGGTGAGGAG TTTGGACGTG GACAAAGCAT TTGGGACTTC 
CCCTGTCTGG CCAAACAGGT GGACGACGAT GAGGATGAAA AGAGAAACGC CGACGTGGAG 
GAGGTCCGAT CTCAGGCTTT TGTGAGGGGA ACCCAGACTG GAGCATCCCT GAATGCCTCA 
ACGGGTGGAG AACTGAGATC TAGCATCCTG CGCAGATCGA CCAAGTCACG CAACTCCACA 
AAGCTCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_648019.2
CDS	200..2188
Translation	MEGQAKQAYFVNEAFTYEEPPQGGGGGGADALHRRKSGGGNKELQLDMGGFKKGQEMAGGNGSDSLPPSMDFDDILPLIGEFGRYQKLLFICMIPFSFFVAFVYFSQIFLTLIPEQHWCHVPELDGLDVEARLALSIPMTNGEYNNCYMYDVNYTDILAQGKVMADPKWPQVKCRHGWSYNFTEIPYATVATEQNWVCDDAALPTYAQSIFFLGAIVGGLLFGWVADRFGRIPALIGTNMMGLLAGVGTAFVSNFWEFAIMRFFVGFAFDNCFTMMYILVLEYVGPKYRTFVANMSIAIFFTGAACLLPWIAYFLADWKLLAIVTSAPLLLAIFTPFVVPESARWLVSQGKVDKAVGILKKLEKGNGRQVPPQTYQIFTDSCKRMQEQEAQNGKYSVLDLFKSPRLRRTTLLLIVIWMAISLVFDGHVRNVGSLGLDIFFTFTLACFTELPADTLLTVILDRFGRRWLACSSMVLSGVFSLLATVVPVGIYSAALAIMGRFFVNISYNIGLQWAAEVLPTVVRAQAVAFIHIMGYVASIIAPFVVYLANISQALPLIILGILGIIGGLLALLLPETLNHVLPQTLSDGEEFGRGQSIWDFPCLAKQVDDDEDEKRNADVEEVRSQAFVRGTQTGASLNASTGGELRSSILRRSTKSRNSTKL

Target ORF information:

RefSeq Version	NM_139762.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein (CG42269), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_139762.3

ORF Insert Sequence:

ATGGAAGGCC AGGCCAAGCA AGCGTACTTC GTTAATGAAG CATTTACCTA CGAGGAGCCG 
CCACAAGGAG GTGGTGGAGG TGGTGCAGAC GCACTGCATC GCCGGAAAAG CGGCGGTGGC 
AACAAGGAAC TCCAACTGGA CATGGGTGGC TTCAAGAAGG GCCAGGAAAT GGCAGGTGGC 
AATGGCAGTG ATTCGCTGCC GCCTAGCATG GACTTTGATG ACATACTCCC CCTGATCGGG 
GAGTTTGGCC GATATCAGAA GCTACTGTTC ATCTGCATGA TCCCATTCTC GTTTTTCGTG 
GCCTTTGTGT ACTTCTCACA AATATTCCTC ACCTTGATAC CCGAACAGCA TTGGTGTCAT 
GTGCCCGAGT TGGATGGCTT GGATGTGGAG GCCAGACTGG CGCTTTCCAT ACCCATGACC 
AATGGCGAAT ACAACAATTG TTACATGTAC GACGTCAACT ATACGGATAT ACTTGCCCAG 
GGCAAGGTGA TGGCCGATCC CAAGTGGCCG CAGGTCAAGT GCCGCCACGG CTGGTCATAT 
AACTTCACGG AAATACCCTA CGCGACGGTG GCCACCGAGC AGAATTGGGT GTGCGATGAC 
GCCGCCCTGC CCACCTACGC CCAGTCCATA TTCTTTCTGG GCGCCATCGT GGGAGGACTG 
CTCTTTGGCT GGGTGGCGGA TCGGTTTGGT CGTATTCCCG CCCTGATCGG CACCAATATG 
ATGGGTCTCC TGGCCGGCGT GGGCACTGCC TTTGTCAGCA ACTTCTGGGA GTTTGCTATC 
ATGCGATTCT TCGTCGGATT CGCCTTTGAC AACTGCTTCA CAATGATGTA CATATTGGTT 
CTCGAGTACG TTGGTCCCAA GTACCGCACC TTTGTGGCCA ATATGTCGAT CGCTATCTTC 
TTCACTGGAG CCGCCTGCCT TCTTCCCTGG ATTGCCTACT TTTTGGCAGA TTGGAAACTC 
CTGGCCATCG TGACCTCTGC TCCGCTACTT TTGGCTATAT TCACCCCATT CGTGGTACCC 
GAATCAGCTC GTTGGTTAGT CTCCCAGGGA AAAGTGGACA AGGCCGTGGG AATCCTGAAG 
AAACTTGAGA AGGGCAATGG GCGTCAGGTG CCCCCTCAGA CATATCAAAT CTTTACGGAC 
AGCTGTAAGA GGATGCAGGA GCAGGAGGCC CAGAATGGCA AATACTCTGT ACTGGATCTC 
TTTAAGTCAC CAAGATTGCG GCGAACTACT CTGCTGCTTA TTGTTATCTG GATGGCCATA 
TCCCTAGTCT TCGATGGACA TGTGAGGAAT GTGGGATCAC TGGGTTTGGA CATCTTCTTC 
ACCTTCACCC TGGCCTGTTT CACGGAGCTG CCCGCCGATA CTTTGCTTAC GGTGATCCTG 
GATCGGTTCG GACGCCGTTG GTTGGCCTGC AGCTCCATGG TCCTTAGTGG AGTGTTCAGC 
TTATTGGCCA CTGTGGTGCC CGTGGGCATA TACTCCGCTG CCTTGGCCAT CATGGGTCGA 
TTCTTTGTAA ACATTAGCTA TAATATTGGT TTGCAATGGG CGGCGGAGGT CCTGCCCACT 
GTGGTTAGGG CGCAGGCAGT GGCCTTCATC CATATCATGG GTTATGTGGC CAGCATCATA 
GCACCATTTG TGGTTTATCT GGCCAACATT TCCCAAGCCC TGCCACTGAT TATCCTTGGA 
ATTTTAGGAA TTATTGGTGG CTTATTGGCG CTCCTACTGC CGGAGACCCT AAATCATGTC 
CTGCCACAAA CCCTTAGCGA CGGTGAGGAG TTTGGACGTG GACAAAGCAT TTGGGACTTC 
CCCTGTCTGG CCAAACAGGT GGACGACGAT GAGGATGAAA AGAGAAACGC CGACGTGGAG 
GAGGTCCGAT CTCAGGCTTT TGTGAGGGGA ACCCAGACTG GAGCATCCCT GAATGCCTCA 
ACGGGTGGAG AACTGAGATC TAGCATCCTG CGCAGATCGA CCAAGTCACG CAACTCCACA 
AAGCTCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG42269 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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