Tudor-SN cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	Tudor-SN
Entrez Gene ID	38045
Full Name	Tudor staphylococcal nuclease
Synonyms	CG7008,Dmel\CG7008,SND1,TSN,TSN-1,TUDOR-SN,dP100,p100,tudor-SN
General protein information	Preferred Names Tudor staphylococcal nuclease Names CG7008 gene product from transcript CG7008-RB CG7008-PA CG7008-PB Tudor-SN-PA Tudor-SN-PB tudor staphylococcal nuclease
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3L Map Location: 61B3-61B3

mRNA and Protein(s)

mRNA	Protein	Name
NM_138177.3	NP_612021.1	tudor staphylococcal nuclease, isoform A
NM_001274266.1	NP_001261195.1	tudor staphylococcal nuclease, isoform B

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	SND1	XP_532436.3
Mus musculus (house mouse)	Snd1	NP_062750.2
Danio rerio (zebrafish)	snd1	NP_878285.2
Schizosaccharomyces pombe (fission yeast)	snd1	NP_588117.1
Magnaporthe oryzae (rice blast fungus)	MGG_12646	XP_003721166.1
Neurospora crassa	NCU02134	XP_964292.1
Arabidopsis thaliana (thale cress)	Tudor2	NP_200986.1
Oryza sativa (rice)	Os02g0523500	NP_001046985.1
Homo sapiens (human)	SND1	NP_055205.2
Rattus norvegicus (Norway rat)	Snd1	NP_073185.2
Drosophila melanogaster (fruit fly)	Tudor-SN	NP_612021.1
Caenorhabditis elegans (roundworm)	tsn-1	NP_494839.1
Arabidopsis thaliana (thale cress)	Tudor1	NP_196352.2
Bos taurus (cattle)	SND1	NP_991353.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP005672	XP_315689.3
Xenopus tropicalis (tropical clawed frog)	snd1	NP_989183.2
Pan troglodytes (chimpanzee)	SND1	XP_527879.3
	SND1	XP_001088001.2

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Our results reveal the biological function of TSN and its contrasting modes of interaction with Piwi in spermatogenesis, transposon silencing, and piRNA biogenesis.
Title: Tudor-SN Interacts with Piwi Antagonistically in Regulating Spermatogenesis but Synergistically in Silencing Transposons in Drosophila.

the aromatic cage of the Tudor domain binds a peptide containing symmetrically dimethylated arginines (sDMA) with micromolar affinity, while the same peptide comprising nonmethylated arginines does not show significant chemical shift perturbations
Title: Structure and ligand binding of the extended Tudor domain of D. melanogaster Tudor-SN.

Tudor-SN (tudor staphylococcal nuclease)--a protein containing five staphylococcal/micrococcal nuclease domains and a tudor domain--is a component of the RISC enzyme in Caenorhabditis elegans, Drosophila and mammals
Title: A micrococcal nuclease homologue in RNAi effector complexes.

The following Tudor-SN gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Tudor-SN cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa17050	NM_001274266.1 Latest version!	Drosophila melanogaster tudor staphylococcal nuclease, transcript variant B (Tudor-SN), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$510.30 $729.00
OFa17050	NM_138177.3 Latest version!	Drosophila melanogaster tudor staphylococcal nuclease, transcript variant A (Tudor-SN), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$510.30 $729.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Tudor-SN ( NM_138177.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_612021.1 Drosophila melanogaster tudor staphylococcal nuclease, transcript variant A (Tudor-SN), mRNA.

Price & Availability↑

CloneID	OFa17050
Clone ID Related Accession (Same CDS sequence)	NM_138177.3 , NM_001274266.1
Accession Version	NM_138177.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2781bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	tudor staphylococcal nuclease, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_138177.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCAACAG CAGCGAACAC CGCGACAGCT GCCGGAGCAG CTAAAGACGC CCCGCCAGCG 
CCTACAAAGT CGTTGTCCGG CATTGTAAAG CAGGTTCTCT CCGGCGATAC GGTAGTTATT 
CGCGCAACTA AGGGTGCCCC GCCTCCGGAG AAACAAATTA CTTTCTCGCA TGTCCTTGCC 
CCGAAGTTGG CCCGTCGTCC TGGCGCTGGC GGAGACGAGA CCAAGGACGA GCCCTGGGCT 
TGGGAGTCGC GGGAATTCTT GCGTAAAAAG TTGATAGGTG TGGAGGTGAC TTTCACGTTT 
GACAAGCCAG CCAACTCGAA CCGGGAGTAC GGTTTTGTGT GGATCGGTAA GGACAAGGAA 
ACCGGTGAAA ATGTGGTCGA GTCGATTGTC CGAGAGGGCC TGGTGTCGGT CCGTCGAGAG 
GGACGTCCCA CAGCCGAGCA GCAAACACTC ATCGAGTTGG AGGACCAGGC GCGTGCAGCA 
GGCCGCGGAA AATGGTCGCC CACCGCAAGT GCCGCCGACA AGGTTCGCAA CATCAAGTGG 
TCCCATGAGA ATCCCGCACA CCTGGTCGAC ATCTACGGAG GAAACCCCGT GAAGGCGATC 
ATCGAGCACG TGCGCGATGG ATCCACGGTC CGAGCATTCT TGCTGCCGGA CTTCCACTAC 
ATAACGCTAA TGATTTCGGG CATCCGTTGT CCAGGAGTGA AATTAGATGC TGATGGCAAG 
CCCGACCTCA GTGTAAAGGT GCCTTTTGCT GACGAAGCTC GCTACTATGT GGAAACCCGC 
CTGTTGCAAC GCGATGTGGA AATCCGACTG GAATCGGTTA ACAACTCTAA CTTCATTGGA 
ACTATTCTGT ATCCCAAGGG AAACATTGCA GAATCACTCC TGCGAGAGGG ACTTGCCAAG 
TGTGTGGACT GGTCAATGGC TGTTATGAAG ACAGGCACCG ATAAACTGCG GGCTGCGGAG 
CGTTTTGCCA AGGAGAAGCG TCTTCGCCAA TGGCAGGACT ACCAAGCTAA AACTCCTGCT 
TTCAACTCGA AGGAGAAAGA CTTCTCTGGA ACAGTGGTGG AAGTCTTCAA TGGCGATGCT 
ATTAATGTAC GTCTTTCCAA TGGACAAGTA AAGAAGGTTT TCTTCTCGTC TATCAGGCCG 
CCGCGTGACC AACGCGCGGT TGTTGGCACC GATGGCGAGG AAATCGTCAA GGCACCACCA 
CGCGGAAAAA ACTACAGACC ACTTTACGAA ATTCCACACA TGTTCGATGC CCGTGAGTTT 
CTGCGTAAAA AACTAATTAA TAAAAAAGTT CAATGCAACC TGGACTACAT CTCACCGCCG 
CGCGAAAACT TCCCTGAGAA ATACTGCTAT ACCGTCTCTA TTGGCGGTCA GAACGTGGCT 
GAGGCAATGG TAGCCAAAGG TTTGGCAACA TGTGTTCGCT ATCGCCAGGA CGACGATCAG 
AGATCTTCCG CCTATGATCA ATTGATTGCC GCCGAACAGC AAGCCATCAA GGGACTAAAG 
GGACTGCACG CAAAGAAGGA TAACGCCACA CTGCGTGTTA ACGACCTGAC TGTTGATCAT 
TCCCGAATTA AAGTTCAATA CTTGCCATCG TGGCAGCGTG CTTTGCGTAC TGAAGCCATT 
GTAGAGTTTG TCGCCAGCGG ATCCCGCCTC CGAATCTTTG TACCGAAGGA CAGTTGCCTG 
GTAACATTCC TGCTTGCTGG GATTTCATGT CCGCGTTCCT CTCGTCCAGC GCTTAATGGC 
GTTCCTGCCC AAGAGGGGGA ACCATTTGGC GACGAGGCTT TGACCTTTAC CAGGGAGCGT 
GTCTTGCAAC GCGACGTTTC TGTTCATATC GATACCACCG ACAAGGCAGG ATCTTCAGTG 
ATTGGTTGGC TCTGGACGGA CAGCGGCGCC AACTTGTCAG TTGCTCTTGT CGAAGAGGGT 
CTTGCTGAAG TGCACTTTAG TGCTGAAAAA TCTGAATACT ACCGCCAGTT GAAGATTGCT 
GAAGACCGTG CCAAGGCCGC CAAAAAGAAC ATCTGGACAA ACTACGTAGA AGAAGTGCCT 
AAAGAAAAAA CTGTCACCGA GGAAGAAAAG GAGGACAAGG TAGTGGCGGA GCGTAAAGTC 
AACTACGAAA ACGTTATTGT CACTGAGATC ACCGAAACTC TGACATTCTT CGCGCAATCT 
GTGGAGAGCG GATCCAAGCT AGAGTCGCTT ATGAGCAAAC TTCACGCCGA TTTCCAGTCC 
AACCCACCCA TCGCTGGATC GTACACGCCA AAGCGTGGTG ACCTGGTGGC CGCTCAGTTT 
ACACTTGATA ATCAGTGGTA TCGTGCCAAG GTGGAACGCG TGCAGGGCAG TAATGCTACA 
GTCCTGTACA TCGATTATGG AAACAAGGAG ACACTTCCGA CCAACCGTTT GGCAGCCCTG 
CCACCAGCCT TCAGCAGCGA AAAGCCCTAC GCTACGGAGT ATGCTTTGGC CTTAGTCGCC 
CTGCCAACTG ACAACGAAGA TAAGGAAGAA GCCTTGCGTG CCTTTTCCGA AGACGTTTTG 
AACCATAAGG TTCAACTCAA TGTCGAGCTA AAGGTGACTG GGTCGCCGAA CTTGGCCACT 
CTTCGCGATC CAACTACTAA AGTCGATTTT GGAAAGCAGC TTGTAGCCGA GGGCCTTGTT 
CTGGCCGAAC AGCGTGGAGA GCGGAAGCTC AAGGAACTAG TGGACCAGTA CAAAGCCGCG 
CAGGAAGCAG CTCGGGTCGC GCATCTGGCC ATCTGGAAGT ACGGTGACAT AACGCAAGAT 
GATGCGCCCG AGTTCCGCTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_612021.1
CDS	171..2951
Translation	MATAANTATAAGAAKDAPPAPTKSLSGIVKQVLSGDTVVIRATKGAPPPEKQITFSHVLAPKLARRPGAGGDETKDEPWAWESREFLRKKLIGVEVTFTFDKPANSNREYGFVWIGKDKETGENVVESIVREGLVSVRREGRPTAEQQTLIELEDQARAAGRGKWSPTASAADKVRNIKWSHENPAHLVDIYGGNPVKAIIEHVRDGSTVRAFLLPDFHYITLMISGIRCPGVKLDADGKPDLSVKVPFADEARYYVETRLLQRDVEIRLESVNNSNFIGTILYPKGNIAESLLREGLAKCVDWSMAVMKTGTDKLRAAERFAKEKRLRQWQDYQAKTPAFNSKEKDFSGTVVEVFNGDAINVRLSNGQVKKVFFSSIRPPRDQRAVVGTDGEEIVKAPPRGKNYRPLYEIPHMFDAREFLRKKLINKKVQCNLDYISPPRENFPEKYCYTVSIGGQNVAEAMVAKGLATCVRYRQDDDQRSSAYDQLIAAEQQAIKGLKGLHAKKDNATLRVNDLTVDHSRIKVQYLPSWQRALRTEAIVEFVASGSRLRIFVPKDSCLVTFLLAGISCPRSSRPALNGVPAQEGEPFGDEALTFTRERVLQRDVSVHIDTTDKAGSSVIGWLWTDSGANLSVALVEEGLAEVHFSAEKSEYYRQLKIAEDRAKAAKKNIWTNYVEEVPKEKTVTEEEKEDKVVAERKVNYENVIVTEITETLTFFAQSVESGSKLESLMSKLHADFQSNPPIAGSYTPKRGDLVAAQFTLDNQWYRAKVERVQGSNATVLYIDYGNKETLPTNRLAALPPAFSSEKPYATEYALALVALPTDNEDKEEALRAFSEDVLNHKVQLNVELKVTGSPNLATLRDPTTKVDFGKQLVAEGLVLAEQRGERKLKELVDQYKAAQEAARVAHLAIWKYGDITQDDAPEFR

Target ORF information:

RefSeq Version	NM_138177.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster tudor staphylococcal nuclease, transcript variant A (Tudor-SN), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_138177.3

ORF Insert Sequence:

ATGGCAACAG CAGCGAACAC CGCGACAGCT GCCGGAGCAG CTAAAGACGC CCCGCCAGCG 
CCTACAAAGT CGTTGTCCGG CATTGTAAAG CAGGTTCTCT CCGGCGATAC GGTAGTTATT 
CGCGCAACTA AGGGTGCCCC GCCTCCGGAG AAACAAATTA CTTTCTCGCA TGTCCTTGCC 
CCGAAGTTGG CCCGTCGTCC TGGCGCTGGC GGAGACGAGA CCAAGGACGA GCCCTGGGCT 
TGGGAGTCGC GGGAATTCTT GCGTAAAAAG TTGATAGGTG TGGAGGTGAC TTTCACGTTT 
GACAAGCCAG CCAACTCGAA CCGGGAGTAC GGTTTTGTGT GGATCGGTAA GGACAAGGAA 
ACCGGTGAAA ATGTGGTCGA GTCGATTGTC CGAGAGGGCC TGGTGTCGGT CCGTCGAGAG 
GGACGTCCCA CAGCCGAGCA GCAAACACTC ATCGAGTTGG AGGACCAGGC GCGTGCAGCA 
GGCCGCGGAA AATGGTCGCC CACCGCAAGT GCCGCCGACA AGGTTCGCAA CATCAAGTGG 
TCCCATGAGA ATCCCGCACA CCTGGTCGAC ATCTACGGAG GAAACCCCGT GAAGGCGATC 
ATCGAGCACG TGCGCGATGG ATCCACGGTC CGAGCATTCT TGCTGCCGGA CTTCCACTAC 
ATAACGCTAA TGATTTCGGG CATCCGTTGT CCAGGAGTGA AATTAGATGC TGATGGCAAG 
CCCGACCTCA GTGTAAAGGT GCCTTTTGCT GACGAAGCTC GCTACTATGT GGAAACCCGC 
CTGTTGCAAC GCGATGTGGA AATCCGACTG GAATCGGTTA ACAACTCTAA CTTCATTGGA 
ACTATTCTGT ATCCCAAGGG AAACATTGCA GAATCACTCC TGCGAGAGGG ACTTGCCAAG 
TGTGTGGACT GGTCAATGGC TGTTATGAAG ACAGGCACCG ATAAACTGCG GGCTGCGGAG 
CGTTTTGCCA AGGAGAAGCG TCTTCGCCAA TGGCAGGACT ACCAAGCTAA AACTCCTGCT 
TTCAACTCGA AGGAGAAAGA CTTCTCTGGA ACAGTGGTGG AAGTCTTCAA TGGCGATGCT 
ATTAATGTAC GTCTTTCCAA TGGACAAGTA AAGAAGGTTT TCTTCTCGTC TATCAGGCCG 
CCGCGTGACC AACGCGCGGT TGTTGGCACC GATGGCGAGG AAATCGTCAA GGCACCACCA 
CGCGGAAAAA ACTACAGACC ACTTTACGAA ATTCCACACA TGTTCGATGC CCGTGAGTTT 
CTGCGTAAAA AACTAATTAA TAAAAAAGTT CAATGCAACC TGGACTACAT CTCACCGCCG 
CGCGAAAACT TCCCTGAGAA ATACTGCTAT ACCGTCTCTA TTGGCGGTCA GAACGTGGCT 
GAGGCAATGG TAGCCAAAGG TTTGGCAACA TGTGTTCGCT ATCGCCAGGA CGACGATCAG 
AGATCTTCCG CCTATGATCA ATTGATTGCC GCCGAACAGC AAGCCATCAA GGGACTAAAG 
GGACTGCACG CAAAGAAGGA TAACGCCACA CTGCGTGTTA ACGACCTGAC TGTTGATCAT 
TCCCGAATTA AAGTTCAATA CTTGCCATCG TGGCAGCGTG CTTTGCGTAC TGAAGCCATT 
GTAGAGTTTG TCGCCAGCGG ATCCCGCCTC CGAATCTTTG TACCGAAGGA CAGTTGCCTG 
GTAACATTCC TGCTTGCTGG GATTTCATGT CCGCGTTCCT CTCGTCCAGC GCTTAATGGC 
GTTCCTGCCC AAGAGGGGGA ACCATTTGGC GACGAGGCTT TGACCTTTAC CAGGGAGCGT 
GTCTTGCAAC GCGACGTTTC TGTTCATATC GATACCACCG ACAAGGCAGG ATCTTCAGTG 
ATTGGTTGGC TCTGGACGGA CAGCGGCGCC AACTTGTCAG TTGCTCTTGT CGAAGAGGGT 
CTTGCTGAAG TGCACTTTAG TGCTGAAAAA TCTGAATACT ACCGCCAGTT GAAGATTGCT 
GAAGACCGTG CCAAGGCCGC CAAAAAGAAC ATCTGGACAA ACTACGTAGA AGAAGTGCCT 
AAAGAAAAAA CTGTCACCGA GGAAGAAAAG GAGGACAAGG TAGTGGCGGA GCGTAAAGTC 
AACTACGAAA ACGTTATTGT CACTGAGATC ACCGAAACTC TGACATTCTT CGCGCAATCT 
GTGGAGAGCG GATCCAAGCT AGAGTCGCTT ATGAGCAAAC TTCACGCCGA TTTCCAGTCC 
AACCCACCCA TCGCTGGATC GTACACGCCA AAGCGTGGTG ACCTGGTGGC CGCTCAGTTT 
ACACTTGATA ATCAGTGGTA TCGTGCCAAG GTGGAACGCG TGCAGGGCAG TAATGCTACA 
GTCCTGTACA TCGATTATGG AAACAAGGAG ACACTTCCGA CCAACCGTTT GGCAGCCCTG 
CCACCAGCCT TCAGCAGCGA AAAGCCCTAC GCTACGGAGT ATGCTTTGGC CTTAGTCGCC 
CTGCCAACTG ACAACGAAGA TAAGGAAGAA GCCTTGCGTG CCTTTTCCGA AGACGTTTTG 
AACCATAAGG TTCAACTCAA TGTCGAGCTA AAGGTGACTG GGTCGCCGAA CTTGGCCACT 
CTTCGCGATC CAACTACTAA AGTCGATTTT GGAAAGCAGC TTGTAGCCGA GGGCCTTGTT 
CTGGCCGAAC AGCGTGGAGA GCGGAAGCTC AAGGAACTAG TGGACCAGTA CAAAGCCGCG 
CAGGAAGCAG CTCGGGTCGC GCATCTGGCC ATCTGGAAGT ACGGTGACAT AACGCAAGAT 
GATGCGCCCG AGTTCCGCTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Tudor-SN ( NM_001274266.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001261195.1 Drosophila melanogaster tudor staphylococcal nuclease, transcript variant B (Tudor-SN), mRNA.

Price & Availability↑

CloneID	OFa17050
Clone ID Related Accession (Same CDS sequence)	NM_138177.3 , NM_001274266.1
Accession Version	NM_001274266.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2781bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	tudor staphylococcal nuclease, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCAACAG CAGCGAACAC CGCGACAGCT GCCGGAGCAG CTAAAGACGC CCCGCCAGCG 
CCTACAAAGT CGTTGTCCGG CATTGTAAAG CAGGTTCTCT CCGGCGATAC GGTAGTTATT 
CGCGCAACTA AGGGTGCCCC GCCTCCGGAG AAACAAATTA CTTTCTCGCA TGTCCTTGCC 
CCGAAGTTGG CCCGTCGTCC TGGCGCTGGC GGAGACGAGA CCAAGGACGA GCCCTGGGCT 
TGGGAGTCGC GGGAATTCTT GCGTAAAAAG TTGATAGGTG TGGAGGTGAC TTTCACGTTT 
GACAAGCCAG CCAACTCGAA CCGGGAGTAC GGTTTTGTGT GGATCGGTAA GGACAAGGAA 
ACCGGTGAAA ATGTGGTCGA GTCGATTGTC CGAGAGGGCC TGGTGTCGGT CCGTCGAGAG 
GGACGTCCCA CAGCCGAGCA GCAAACACTC ATCGAGTTGG AGGACCAGGC GCGTGCAGCA 
GGCCGCGGAA AATGGTCGCC CACCGCAAGT GCCGCCGACA AGGTTCGCAA CATCAAGTGG 
TCCCATGAGA ATCCCGCACA CCTGGTCGAC ATCTACGGAG GAAACCCCGT GAAGGCGATC 
ATCGAGCACG TGCGCGATGG ATCCACGGTC CGAGCATTCT TGCTGCCGGA CTTCCACTAC 
ATAACGCTAA TGATTTCGGG CATCCGTTGT CCAGGAGTGA AATTAGATGC TGATGGCAAG 
CCCGACCTCA GTGTAAAGGT GCCTTTTGCT GACGAAGCTC GCTACTATGT GGAAACCCGC 
CTGTTGCAAC GCGATGTGGA AATCCGACTG GAATCGGTTA ACAACTCTAA CTTCATTGGA 
ACTATTCTGT ATCCCAAGGG AAACATTGCA GAATCACTCC TGCGAGAGGG ACTTGCCAAG 
TGTGTGGACT GGTCAATGGC TGTTATGAAG ACAGGCACCG ATAAACTGCG GGCTGCGGAG 
CGTTTTGCCA AGGAGAAGCG TCTTCGCCAA TGGCAGGACT ACCAAGCTAA AACTCCTGCT 
TTCAACTCGA AGGAGAAAGA CTTCTCTGGA ACAGTGGTGG AAGTCTTCAA TGGCGATGCT 
ATTAATGTAC GTCTTTCCAA TGGACAAGTA AAGAAGGTTT TCTTCTCGTC TATCAGGCCG 
CCGCGTGACC AACGCGCGGT TGTTGGCACC GATGGCGAGG AAATCGTCAA GGCACCACCA 
CGCGGAAAAA ACTACAGACC ACTTTACGAA ATTCCACACA TGTTCGATGC CCGTGAGTTT 
CTGCGTAAAA AACTAATTAA TAAAAAAGTT CAATGCAACC TGGACTACAT CTCACCGCCG 
CGCGAAAACT TCCCTGAGAA ATACTGCTAT ACCGTCTCTA TTGGCGGTCA GAACGTGGCT 
GAGGCAATGG TAGCCAAAGG TTTGGCAACA TGTGTTCGCT ATCGCCAGGA CGACGATCAG 
AGATCTTCCG CCTATGATCA ATTGATTGCC GCCGAACAGC AAGCCATCAA GGGACTAAAG 
GGACTGCACG CAAAGAAGGA TAACGCCACA CTGCGTGTTA ACGACCTGAC TGTTGATCAT 
TCCCGAATTA AAGTTCAATA CTTGCCATCG TGGCAGCGTG CTTTGCGTAC TGAAGCCATT 
GTAGAGTTTG TCGCCAGCGG ATCCCGCCTC CGAATCTTTG TACCGAAGGA CAGTTGCCTG 
GTAACATTCC TGCTTGCTGG GATTTCATGT CCGCGTTCCT CTCGTCCAGC GCTTAATGGC 
GTTCCTGCCC AAGAGGGGGA ACCATTTGGC GACGAGGCTT TGACCTTTAC CAGGGAGCGT 
GTCTTGCAAC GCGACGTTTC TGTTCATATC GATACCACCG ACAAGGCAGG ATCTTCAGTG 
ATTGGTTGGC TCTGGACGGA CAGCGGCGCC AACTTGTCAG TTGCTCTTGT CGAAGAGGGT 
CTTGCTGAAG TGCACTTTAG TGCTGAAAAA TCTGAATACT ACCGCCAGTT GAAGATTGCT 
GAAGACCGTG CCAAGGCCGC CAAAAAGAAC ATCTGGACAA ACTACGTAGA AGAAGTGCCT 
AAAGAAAAAA CTGTCACCGA GGAAGAAAAG GAGGACAAGG TAGTGGCGGA GCGTAAAGTC 
AACTACGAAA ACGTTATTGT CACTGAGATC ACCGAAACTC TGACATTCTT CGCGCAATCT 
GTGGAGAGCG GATCCAAGCT AGAGTCGCTT ATGAGCAAAC TTCACGCCGA TTTCCAGTCC 
AACCCACCCA TCGCTGGATC GTACACGCCA AAGCGTGGTG ACCTGGTGGC CGCTCAGTTT 
ACACTTGATA ATCAGTGGTA TCGTGCCAAG GTGGAACGCG TGCAGGGCAG TAATGCTACA 
GTCCTGTACA TCGATTATGG AAACAAGGAG ACACTTCCGA CCAACCGTTT GGCAGCCCTG 
CCACCAGCCT TCAGCAGCGA AAAGCCCTAC GCTACGGAGT ATGCTTTGGC CTTAGTCGCC 
CTGCCAACTG ACAACGAAGA TAAGGAAGAA GCCTTGCGTG CCTTTTCCGA AGACGTTTTG 
AACCATAAGG TTCAACTCAA TGTCGAGCTA AAGGTGACTG GGTCGCCGAA CTTGGCCACT 
CTTCGCGATC CAACTACTAA AGTCGATTTT GGAAAGCAGC TTGTAGCCGA GGGCCTTGTT 
CTGGCCGAAC AGCGTGGAGA GCGGAAGCTC AAGGAACTAG TGGACCAGTA CAAAGCCGCG 
CAGGAAGCAG CTCGGGTCGC GCATCTGGCC ATCTGGAAGT ACGGTGACAT AACGCAAGAT 
GATGCGCCCG AGTTCCGCTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001261195.1
CDS	171..2951
Translation	MATAANTATAAGAAKDAPPAPTKSLSGIVKQVLSGDTVVIRATKGAPPPEKQITFSHVLAPKLARRPGAGGDETKDEPWAWESREFLRKKLIGVEVTFTFDKPANSNREYGFVWIGKDKETGENVVESIVREGLVSVRREGRPTAEQQTLIELEDQARAAGRGKWSPTASAADKVRNIKWSHENPAHLVDIYGGNPVKAIIEHVRDGSTVRAFLLPDFHYITLMISGIRCPGVKLDADGKPDLSVKVPFADEARYYVETRLLQRDVEIRLESVNNSNFIGTILYPKGNIAESLLREGLAKCVDWSMAVMKTGTDKLRAAERFAKEKRLRQWQDYQAKTPAFNSKEKDFSGTVVEVFNGDAINVRLSNGQVKKVFFSSIRPPRDQRAVVGTDGEEIVKAPPRGKNYRPLYEIPHMFDAREFLRKKLINKKVQCNLDYISPPRENFPEKYCYTVSIGGQNVAEAMVAKGLATCVRYRQDDDQRSSAYDQLIAAEQQAIKGLKGLHAKKDNATLRVNDLTVDHSRIKVQYLPSWQRALRTEAIVEFVASGSRLRIFVPKDSCLVTFLLAGISCPRSSRPALNGVPAQEGEPFGDEALTFTRERVLQRDVSVHIDTTDKAGSSVIGWLWTDSGANLSVALVEEGLAEVHFSAEKSEYYRQLKIAEDRAKAAKKNIWTNYVEEVPKEKTVTEEEKEDKVVAERKVNYENVIVTEITETLTFFAQSVESGSKLESLMSKLHADFQSNPPIAGSYTPKRGDLVAAQFTLDNQWYRAKVERVQGSNATVLYIDYGNKETLPTNRLAALPPAFSSEKPYATEYALALVALPTDNEDKEEALRAFSEDVLNHKVQLNVELKVTGSPNLATLRDPTTKVDFGKQLVAEGLVLAEQRGERKLKELVDQYKAAQEAARVAHLAIWKYGDITQDDAPEFR

Target ORF information:

RefSeq Version	NM_001274266.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster tudor staphylococcal nuclease, transcript variant B (Tudor-SN), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001274266.1

ORF Insert Sequence:

ATGGCAACAG CAGCGAACAC CGCGACAGCT GCCGGAGCAG CTAAAGACGC CCCGCCAGCG 
CCTACAAAGT CGTTGTCCGG CATTGTAAAG CAGGTTCTCT CCGGCGATAC GGTAGTTATT 
CGCGCAACTA AGGGTGCCCC GCCTCCGGAG AAACAAATTA CTTTCTCGCA TGTCCTTGCC 
CCGAAGTTGG CCCGTCGTCC TGGCGCTGGC GGAGACGAGA CCAAGGACGA GCCCTGGGCT 
TGGGAGTCGC GGGAATTCTT GCGTAAAAAG TTGATAGGTG TGGAGGTGAC TTTCACGTTT 
GACAAGCCAG CCAACTCGAA CCGGGAGTAC GGTTTTGTGT GGATCGGTAA GGACAAGGAA 
ACCGGTGAAA ATGTGGTCGA GTCGATTGTC CGAGAGGGCC TGGTGTCGGT CCGTCGAGAG 
GGACGTCCCA CAGCCGAGCA GCAAACACTC ATCGAGTTGG AGGACCAGGC GCGTGCAGCA 
GGCCGCGGAA AATGGTCGCC CACCGCAAGT GCCGCCGACA AGGTTCGCAA CATCAAGTGG 
TCCCATGAGA ATCCCGCACA CCTGGTCGAC ATCTACGGAG GAAACCCCGT GAAGGCGATC 
ATCGAGCACG TGCGCGATGG ATCCACGGTC CGAGCATTCT TGCTGCCGGA CTTCCACTAC 
ATAACGCTAA TGATTTCGGG CATCCGTTGT CCAGGAGTGA AATTAGATGC TGATGGCAAG 
CCCGACCTCA GTGTAAAGGT GCCTTTTGCT GACGAAGCTC GCTACTATGT GGAAACCCGC 
CTGTTGCAAC GCGATGTGGA AATCCGACTG GAATCGGTTA ACAACTCTAA CTTCATTGGA 
ACTATTCTGT ATCCCAAGGG AAACATTGCA GAATCACTCC TGCGAGAGGG ACTTGCCAAG 
TGTGTGGACT GGTCAATGGC TGTTATGAAG ACAGGCACCG ATAAACTGCG GGCTGCGGAG 
CGTTTTGCCA AGGAGAAGCG TCTTCGCCAA TGGCAGGACT ACCAAGCTAA AACTCCTGCT 
TTCAACTCGA AGGAGAAAGA CTTCTCTGGA ACAGTGGTGG AAGTCTTCAA TGGCGATGCT 
ATTAATGTAC GTCTTTCCAA TGGACAAGTA AAGAAGGTTT TCTTCTCGTC TATCAGGCCG 
CCGCGTGACC AACGCGCGGT TGTTGGCACC GATGGCGAGG AAATCGTCAA GGCACCACCA 
CGCGGAAAAA ACTACAGACC ACTTTACGAA ATTCCACACA TGTTCGATGC CCGTGAGTTT 
CTGCGTAAAA AACTAATTAA TAAAAAAGTT CAATGCAACC TGGACTACAT CTCACCGCCG 
CGCGAAAACT TCCCTGAGAA ATACTGCTAT ACCGTCTCTA TTGGCGGTCA GAACGTGGCT 
GAGGCAATGG TAGCCAAAGG TTTGGCAACA TGTGTTCGCT ATCGCCAGGA CGACGATCAG 
AGATCTTCCG CCTATGATCA ATTGATTGCC GCCGAACAGC AAGCCATCAA GGGACTAAAG 
GGACTGCACG CAAAGAAGGA TAACGCCACA CTGCGTGTTA ACGACCTGAC TGTTGATCAT 
TCCCGAATTA AAGTTCAATA CTTGCCATCG TGGCAGCGTG CTTTGCGTAC TGAAGCCATT 
GTAGAGTTTG TCGCCAGCGG ATCCCGCCTC CGAATCTTTG TACCGAAGGA CAGTTGCCTG 
GTAACATTCC TGCTTGCTGG GATTTCATGT CCGCGTTCCT CTCGTCCAGC GCTTAATGGC 
GTTCCTGCCC AAGAGGGGGA ACCATTTGGC GACGAGGCTT TGACCTTTAC CAGGGAGCGT 
GTCTTGCAAC GCGACGTTTC TGTTCATATC GATACCACCG ACAAGGCAGG ATCTTCAGTG 
ATTGGTTGGC TCTGGACGGA CAGCGGCGCC AACTTGTCAG TTGCTCTTGT CGAAGAGGGT 
CTTGCTGAAG TGCACTTTAG TGCTGAAAAA TCTGAATACT ACCGCCAGTT GAAGATTGCT 
GAAGACCGTG CCAAGGCCGC CAAAAAGAAC ATCTGGACAA ACTACGTAGA AGAAGTGCCT 
AAAGAAAAAA CTGTCACCGA GGAAGAAAAG GAGGACAAGG TAGTGGCGGA GCGTAAAGTC 
AACTACGAAA ACGTTATTGT CACTGAGATC ACCGAAACTC TGACATTCTT CGCGCAATCT 
GTGGAGAGCG GATCCAAGCT AGAGTCGCTT ATGAGCAAAC TTCACGCCGA TTTCCAGTCC 
AACCCACCCA TCGCTGGATC GTACACGCCA AAGCGTGGTG ACCTGGTGGC CGCTCAGTTT 
ACACTTGATA ATCAGTGGTA TCGTGCCAAG GTGGAACGCG TGCAGGGCAG TAATGCTACA 
GTCCTGTACA TCGATTATGG AAACAAGGAG ACACTTCCGA CCAACCGTTT GGCAGCCCTG 
CCACCAGCCT TCAGCAGCGA AAAGCCCTAC GCTACGGAGT ATGCTTTGGC CTTAGTCGCC 
CTGCCAACTG ACAACGAAGA TAAGGAAGAA GCCTTGCGTG CCTTTTCCGA AGACGTTTTG 
AACCATAAGG TTCAACTCAA TGTCGAGCTA AAGGTGACTG GGTCGCCGAA CTTGGCCACT 
CTTCGCGATC CAACTACTAA AGTCGATTTT GGAAAGCAGC TTGTAGCCGA GGGCCTTGTT 
CTGGCCGAAC AGCGTGGAGA GCGGAAGCTC AAGGAACTAG TGGACCAGTA CAAAGCCGCG 
CAGGAAGCAG CTCGGGTCGC GCATCTGGCC ATCTGGAAGT ACGGTGACAT AACGCAAGAT 
GATGCGCCCG AGTTCCGCTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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Tudor-SN cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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