CG3788 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG3788
Entrez Gene ID	37644
Full Name	CG3788 gene product from transcript CG3788-RB
Synonyms	Dmel\CG3788
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2R Map Location: 59B6-59B6

mRNA and Protein(s)

mRNA	Protein	Name
NM_137894.3	NP_611738.1	uncharacterized protein, isoform A
NM_001202062.2	NP_001188991.1	uncharacterized protein, isoform B

Pathways from BioSystems

Homologies

Drosophila melanogaster (fruit fly)	CG3788	NP_001188991.1
Xenopus tropicalis (tropical clawed frog)	upp1	NP_001011119.1
Homo sapiens (human)	UPP1	NP_001274355.1
Pan troglodytes (chimpanzee)	UPP1	XP_001153423.1
Canis lupus familiaris (dog)	LOC100856638	XP_003640337.2
Rattus norvegicus (Norway rat)	Upp1	NP_001025196.1
Gallus gallus (chicken)	UPP1	XP_004935192.1
	UPP1	XP_001084775.1
Canis lupus familiaris (dog)	UPP1	XP_537889.3
Bos taurus (cattle)	UPP1	NP_001092446.1
Mus musculus (house mouse)	Upp1	NP_001152873.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG3788 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG3788 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa10983	NM_001202062.2 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant B (CG3788), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
OFa10983	NM_137894.3 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant A (CG3788), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG3788 ( NM_137894.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_611738.1 Drosophila melanogaster uncharacterized protein, transcript variant A (CG3788), mRNA.

Price & Availability↑

CloneID	OFa10983
Clone ID Related Accession (Same CDS sequence)	NM_137894.3 , NM_001202062.2
Accession Version	NM_137894.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1137bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). On Jan 31, 2011 this sequence version replaced NM_137894.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGTCCAAAA GCAACTGCAG TGACTGCACA TGCCGTTTGG CCAACGAGGT GGGCCAGCTA 
AAGGCCATCG TGAATGCCCA GAGCAGGACG CTCGCCAAGC TGGTCCGTCA GATGAAGGAA 
GGCTGCAAAA AGGACGAGGA GGCCAAGGAA TCCACATTGT GCGGCCTGAA TCCCTGCCTG 
AAGTGCCTGC AGCCTGACAT ACTCTACCAC CTGGGCCTGA ATACGGAGAC CACGGACTTT 
CCCAAGGTTT TTGGTGATGT GAGGTTTGTA TGCATGGGAG GTACTCCGGG TCGGATGGAA 
AACTTTGCCT ACTACGTGAT GCAGGAGATC GGTCTGAAGA TAAACGCGGC TACCAAGCTA 
CGGAACATAT CGGAGGCCGG CCAGCGATTC TCCTTGTTCA AGGTGGGTCC CGTGCTCTGC 
GCCAGCCACG GAATGGGTTG TCCGTCGATC TCCATACTGC TGCACGAACT CATCAAGATG 
ATGTACCACG CCAAGTGCAA GGACCCCGTC TTCATCAGAA TTGGCACCAG CGGCGGCATT 
GGCGTTGAAC CCGGCACCGT GATCATTTCC TCCGAGGCGA TTGATGGTCG CTTGAATCCC 
GTCCACGAGA TCCTTGTGCA CGGCGTCAGT GTCCAGCATG CCAGCCAGCT CGATGAGAGT 
CTGGCCGATG AAATCAAGAT GTGCCACGAT CCCTGCAAGG ACAAATATGA AGCTGTCATC 
GGCCGGACTC TGTGTGCCCA TGACTTCTAC GAAGGCCAGT CGCGCCTCGA TGGAGCCTTC 
TGCGAGTACA CGCCCGAAAT GAAGAAATCC TACTTGGAGA CGCTGCAGAG CCAGCAGGTG 
AAGAATATCG AGATGGAGAG CTTGGCCTTT GCCGCCCTCA CCAGTAGGGC CAACATCAGG 
GGCGCGGTCG TCTGTGTGGC CATCCTGAAT CGCCTAAATG GGGATCAAAT CAAAACGCCA 
CATGATGTTT TGTCCAAATG GGAGAAGAGA CCACAGGAGC TGGTGGCCCG CTATATACGC 
AAGGTTCTTT ACCATAACGA CGATGACGAT GAGTCGGAGC AACCGGAGGA CGAGGCCGAG 
GCAGGAGCAG CTGGGGGCGG GGACACCCAA AAGGCGCCTG TAGAAGAAGC CGAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_611738.1
CDS	77..1213
Translation	MSKSNCSDCTCRLANEVGQLKAIVNAQSRTLAKLVRQMKEGCKKDEEAKESTLCGLNPCLKCLQPDILYHLGLNTETTDFPKVFGDVRFVCMGGTPGRMENFAYYVMQEIGLKINAATKLRNISEAGQRFSLFKVGPVLCASHGMGCPSISILLHELIKMMYHAKCKDPVFIRIGTSGGIGVEPGTVIISSEAIDGRLNPVHEILVHGVSVQHASQLDESLADEIKMCHDPCKDKYEAVIGRTLCAHDFYEGQSRLDGAFCEYTPEMKKSYLETLQSQQVKNIEMESLAFAALTSRANIRGAVVCVAILNRLNGDQIKTPHDVLSKWEKRPQELVARYIRKVLYHNDDDDESEQPEDEAEAGAAGGGDTQKAPVEEAE

Target ORF information:

RefSeq Version	NM_137894.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant A (CG3788), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_137894.3

ORF Insert Sequence:

ATGTCCAAAA GCAACTGCAG TGACTGCACA TGCCGTTTGG CCAACGAGGT GGGCCAGCTA 
AAGGCCATCG TGAATGCCCA GAGCAGGACG CTCGCCAAGC TGGTCCGTCA GATGAAGGAA 
GGCTGCAAAA AGGACGAGGA GGCCAAGGAA TCCACATTGT GCGGCCTGAA TCCCTGCCTG 
AAGTGCCTGC AGCCTGACAT ACTCTACCAC CTGGGCCTGA ATACGGAGAC CACGGACTTT 
CCCAAGGTTT TTGGTGATGT GAGGTTTGTA TGCATGGGAG GTACTCCGGG TCGGATGGAA 
AACTTTGCCT ACTACGTGAT GCAGGAGATC GGTCTGAAGA TAAACGCGGC TACCAAGCTA 
CGGAACATAT CGGAGGCCGG CCAGCGATTC TCCTTGTTCA AGGTGGGTCC CGTGCTCTGC 
GCCAGCCACG GAATGGGTTG TCCGTCGATC TCCATACTGC TGCACGAACT CATCAAGATG 
ATGTACCACG CCAAGTGCAA GGACCCCGTC TTCATCAGAA TTGGCACCAG CGGCGGCATT 
GGCGTTGAAC CCGGCACCGT GATCATTTCC TCCGAGGCGA TTGATGGTCG CTTGAATCCC 
GTCCACGAGA TCCTTGTGCA CGGCGTCAGT GTCCAGCATG CCAGCCAGCT CGATGAGAGT 
CTGGCCGATG AAATCAAGAT GTGCCACGAT CCCTGCAAGG ACAAATATGA AGCTGTCATC 
GGCCGGACTC TGTGTGCCCA TGACTTCTAC GAAGGCCAGT CGCGCCTCGA TGGAGCCTTC 
TGCGAGTACA CGCCCGAAAT GAAGAAATCC TACTTGGAGA CGCTGCAGAG CCAGCAGGTG 
AAGAATATCG AGATGGAGAG CTTGGCCTTT GCCGCCCTCA CCAGTAGGGC CAACATCAGG 
GGCGCGGTCG TCTGTGTGGC CATCCTGAAT CGCCTAAATG GGGATCAAAT CAAAACGCCA 
CATGATGTTT TGTCCAAATG GGAGAAGAGA CCACAGGAGC TGGTGGCCCG CTATATACGC 
AAGGTTCTTT ACCATAACGA CGATGACGAT GAGTCGGAGC AACCGGAGGA CGAGGCCGAG 
GCAGGAGCAG CTGGGGGCGG GGACACCCAA AAGGCGCCTG TAGAAGAAGC CGAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CG3788 ( NM_001202062.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001188991.1 Drosophila melanogaster uncharacterized protein, transcript variant B (CG3788), mRNA.

Price & Availability↑

CloneID	OFa10983
Clone ID Related Accession (Same CDS sequence)	NM_137894.3 , NM_001202062.2
Accession Version	NM_001202062.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1137bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). On Jan 16, 2013 this sequence version replaced NM_001202062.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGTCCAAAA GCAACTGCAG TGACTGCACA TGCCGTTTGG CCAACGAGGT GGGCCAGCTA 
AAGGCCATCG TGAATGCCCA GAGCAGGACG CTCGCCAAGC TGGTCCGTCA GATGAAGGAA 
GGCTGCAAAA AGGACGAGGA GGCCAAGGAA TCCACATTGT GCGGCCTGAA TCCCTGCCTG 
AAGTGCCTGC AGCCTGACAT ACTCTACCAC CTGGGCCTGA ATACGGAGAC CACGGACTTT 
CCCAAGGTTT TTGGTGATGT GAGGTTTGTA TGCATGGGAG GTACTCCGGG TCGGATGGAA 
AACTTTGCCT ACTACGTGAT GCAGGAGATC GGTCTGAAGA TAAACGCGGC TACCAAGCTA 
CGGAACATAT CGGAGGCCGG CCAGCGATTC TCCTTGTTCA AGGTGGGTCC CGTGCTCTGC 
GCCAGCCACG GAATGGGTTG TCCGTCGATC TCCATACTGC TGCACGAACT CATCAAGATG 
ATGTACCACG CCAAGTGCAA GGACCCCGTC TTCATCAGAA TTGGCACCAG CGGCGGCATT 
GGCGTTGAAC CCGGCACCGT GATCATTTCC TCCGAGGCGA TTGATGGTCG CTTGAATCCC 
GTCCACGAGA TCCTTGTGCA CGGCGTCAGT GTCCAGCATG CCAGCCAGCT CGATGAGAGT 
CTGGCCGATG AAATCAAGAT GTGCCACGAT CCCTGCAAGG ACAAATATGA AGCTGTCATC 
GGCCGGACTC TGTGTGCCCA TGACTTCTAC GAAGGCCAGT CGCGCCTCGA TGGAGCCTTC 
TGCGAGTACA CGCCCGAAAT GAAGAAATCC TACTTGGAGA CGCTGCAGAG CCAGCAGGTG 
AAGAATATCG AGATGGAGAG CTTGGCCTTT GCCGCCCTCA CCAGTAGGGC CAACATCAGG 
GGCGCGGTCG TCTGTGTGGC CATCCTGAAT CGCCTAAATG GGGATCAAAT CAAAACGCCA 
CATGATGTTT TGTCCAAATG GGAGAAGAGA CCACAGGAGC TGGTGGCCCG CTATATACGC 
AAGGTTCTTT ACCATAACGA CGATGACGAT GAGTCGGAGC AACCGGAGGA CGAGGCCGAG 
GCAGGAGCAG CTGGGGGCGG GGACACCCAA AAGGCGCCTG TAGAAGAAGC CGAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001188991.1
CDS	539..1675
Translation	MSKSNCSDCTCRLANEVGQLKAIVNAQSRTLAKLVRQMKEGCKKDEEAKESTLCGLNPCLKCLQPDILYHLGLNTETTDFPKVFGDVRFVCMGGTPGRMENFAYYVMQEIGLKINAATKLRNISEAGQRFSLFKVGPVLCASHGMGCPSISILLHELIKMMYHAKCKDPVFIRIGTSGGIGVEPGTVIISSEAIDGRLNPVHEILVHGVSVQHASQLDESLADEIKMCHDPCKDKYEAVIGRTLCAHDFYEGQSRLDGAFCEYTPEMKKSYLETLQSQQVKNIEMESLAFAALTSRANIRGAVVCVAILNRLNGDQIKTPHDVLSKWEKRPQELVARYIRKVLYHNDDDDESEQPEDEAEAGAAGGGDTQKAPVEEAE

Target ORF information:

RefSeq Version	NM_001202062.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant B (CG3788), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001202062.2

ORF Insert Sequence:

ATGTCCAAAA GCAACTGCAG TGACTGCACA TGCCGTTTGG CCAACGAGGT GGGCCAGCTA 
AAGGCCATCG TGAATGCCCA GAGCAGGACG CTCGCCAAGC TGGTCCGTCA GATGAAGGAA 
GGCTGCAAAA AGGACGAGGA GGCCAAGGAA TCCACATTGT GCGGCCTGAA TCCCTGCCTG 
AAGTGCCTGC AGCCTGACAT ACTCTACCAC CTGGGCCTGA ATACGGAGAC CACGGACTTT 
CCCAAGGTTT TTGGTGATGT GAGGTTTGTA TGCATGGGAG GTACTCCGGG TCGGATGGAA 
AACTTTGCCT ACTACGTGAT GCAGGAGATC GGTCTGAAGA TAAACGCGGC TACCAAGCTA 
CGGAACATAT CGGAGGCCGG CCAGCGATTC TCCTTGTTCA AGGTGGGTCC CGTGCTCTGC 
GCCAGCCACG GAATGGGTTG TCCGTCGATC TCCATACTGC TGCACGAACT CATCAAGATG 
ATGTACCACG CCAAGTGCAA GGACCCCGTC TTCATCAGAA TTGGCACCAG CGGCGGCATT 
GGCGTTGAAC CCGGCACCGT GATCATTTCC TCCGAGGCGA TTGATGGTCG CTTGAATCCC 
GTCCACGAGA TCCTTGTGCA CGGCGTCAGT GTCCAGCATG CCAGCCAGCT CGATGAGAGT 
CTGGCCGATG AAATCAAGAT GTGCCACGAT CCCTGCAAGG ACAAATATGA AGCTGTCATC 
GGCCGGACTC TGTGTGCCCA TGACTTCTAC GAAGGCCAGT CGCGCCTCGA TGGAGCCTTC 
TGCGAGTACA CGCCCGAAAT GAAGAAATCC TACTTGGAGA CGCTGCAGAG CCAGCAGGTG 
AAGAATATCG AGATGGAGAG CTTGGCCTTT GCCGCCCTCA CCAGTAGGGC CAACATCAGG 
GGCGCGGTCG TCTGTGTGGC CATCCTGAAT CGCCTAAATG GGGATCAAAT CAAAACGCCA 
CATGATGTTT TGTCCAAATG GGAGAAGAGA CCACAGGAGC TGGTGGCCCG CTATATACGC 
AAGGTTCTTT ACCATAACGA CGATGACGAT GAGTCGGAGC AACCGGAGGA CGAGGCCGAG 
GCAGGAGCAG CTGGGGGCGG GGACACCCAA AAGGCGCCTG TAGAAGAAGC CGAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG3788 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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