PGRP-SC1b cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	PGRP-SC1b
Entrez Gene ID	35861
Full Name	CG8577 gene product from transcript CG8577-RB
Synonyms	CG8577,CT8705,Dmel\CG8577,PGRP SC,PGRP-SC,PGRP-SC1,PGRP-SC1B,SC1B,pgrp-sc1
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2R Map Location: 44E2-44E2

mRNA and Protein(s)

mRNA	Protein	Name
NM_001299280.1	NP_001286209.1	peptidoglycan recognition protein SC1b, isoform B
NM_136565.2	NP_610409.1	peptidoglycan recognition protein SC1b, isoform A

Pathways from BioSystems

Homologies

Mus musculus (house mouse)	Pglyrp4	NP_001159440.1
Drosophila melanogaster (fruit fly)	PGRP-SC1b	NP_610409.1
Anopheles gambiae (African malaria mosquito)	PGRPS2	XP_316360.1
Pan troglodytes (chimpanzee)	PGLYRP4	XP_001137479.2
Drosophila melanogaster (fruit fly)	PGRP-SC1a	NP_610407.1
Xenopus tropicalis (tropical clawed frog)	pglyrp1	NP_001015775.1
Rattus norvegicus (Norway rat)	Pglyrp4	NP_001178637.1
Homo sapiens (human)	PGLYRP4	NP_065126.2
	PGLYRP4	XP_002801850.1
Drosophila melanogaster (fruit fly)	PGRP-SC2	NP_610410.1
Xenopus tropicalis (tropical clawed frog)	pglyrp1	NP_001025626.1
Bos taurus (cattle)	PGLYRP4	XP_002686069.1
Anopheles gambiae (African malaria mosquito)	PGRPS3	XP_316359.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following PGRP-SC1b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PGRP-SC1b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa12800	NM_001299280.1 Latest version!	Drosophila melanogaster peptidoglycan recognition protein SC1b, transcript variant B (PGRP-SC1b), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
OFa12800	NM_136565.2 Latest version!	Drosophila melanogaster peptidoglycan recognition protein SC1b, transcript variant A (PGRP-SC1b), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

PGRP-SC1b ( NM_001299280.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001286209.1 Drosophila melanogaster peptidoglycan recognition protein SC1b, transcript variant B (PGRP-SC1b), mRNA.

Price & Availability↑

CloneID	OFa12800
Clone ID Related Accession (Same CDS sequence)	NM_001299280.1 , NM_136565.2
Accession Version	NM_001299280.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 558bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	peptidoglycan recognition protein SC1b, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGTTTCCA AAGTGGCTCT CCTCCTCGCC GTCCTGGTCT GCAGCCAGTA TATGGCCCAG 
GGCGTCTATG TCGTCTCCAA GGCGGAGTGG GGTGGTCGCG GCGCCAAATG GACCGTAGGC 
CTGGGCAACT ACCTCAGCTA CGCCATCATC CACCACACCG CCGGCTCCTA CTGCGAGACC 
CGTGCCCAGT GCAACGCCGT GCTGCAGAGC GTCCAGAACT ACCACATGGA CTCCCTGGGC 
TGGCCCGACA TCGGCTACAA CTTCCTGATC GGCGGAGACG GCAACGTGTA CGAGGGGCGT 
GGCTGGAACA ACATGGGCGC CCACGCCGCC GAGTGGAACC CCTACAGCAT CGGCATCAGC 
TTCCTGGGCA ACTACAACTG GGACACCCTG GAGCCGAACA TGATCTCCGC CGCCCAGCAG 
CTGCTCAACG ACGCCGTCAA CCGTGGCCAG CTCAGCTCCG GCTACATCCT GTACGGTCAT 
CGCCAGGTCA GCGCCACCGA ATGCCCCGGC ACTCACATCT GGAACGAGAT CCGCGGCTGG 
TCCCACTGGT CTGGTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001286209.1
CDS	31..588
Translation	MVSKVALLLAVLVCSQYMAQGVYVVSKAEWGGRGAKWTVGLGNYLSYAIIHHTAGSYCETRAQCNAVLQSVQNYHMDSLGWPDIGYNFLIGGDGNVYEGRGWNNMGAHAAEWNPYSIGISFLGNYNWDTLEPNMISAAQQLLNDAVNRGQLSSGYILYGHRQVSATECPGTHIWNEIRGWSHWSG

Target ORF information:

RefSeq Version	NM_001299280.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster peptidoglycan recognition protein SC1b, transcript variant B (PGRP-SC1b), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001299280.1

ORF Insert Sequence:

ATGGTTTCCA AAGTGGCTCT CCTCCTCGCC GTCCTGGTCT GCAGCCAGTA TATGGCCCAG 
GGCGTCTATG TCGTCTCCAA GGCGGAGTGG GGTGGTCGCG GCGCCAAATG GACCGTAGGC 
CTGGGCAACT ACCTCAGCTA CGCCATCATC CACCACACCG CCGGCTCCTA CTGCGAGACC 
CGTGCCCAGT GCAACGCCGT GCTGCAGAGC GTCCAGAACT ACCACATGGA CTCCCTGGGC 
TGGCCCGACA TCGGCTACAA CTTCCTGATC GGCGGAGACG GCAACGTGTA CGAGGGGCGT 
GGCTGGAACA ACATGGGCGC CCACGCCGCC GAGTGGAACC CCTACAGCAT CGGCATCAGC 
TTCCTGGGCA ACTACAACTG GGACACCCTG GAGCCGAACA TGATCTCCGC CGCCCAGCAG 
CTGCTCAACG ACGCCGTCAA CCGTGGCCAG CTCAGCTCCG GCTACATCCT GTACGGTCAT 
CGCCAGGTCA GCGCCACCGA ATGCCCCGGC ACTCACATCT GGAACGAGAT CCGCGGCTGG 
TCCCACTGGT CTGGTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PGRP-SC1b ( NM_136565.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_610409.1 Drosophila melanogaster peptidoglycan recognition protein SC1b, transcript variant A (PGRP-SC1b), mRNA.

Price & Availability↑

CloneID	OFa12800
Clone ID Related Accession (Same CDS sequence)	NM_001299280.1 , NM_136565.2
Accession Version	NM_136565.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 558bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	peptidoglycan recognition protein SC1b, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). On Jul 15, 2014 this sequence version replaced NM_136565.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGTTTCCA AAGTGGCTCT CCTCCTCGCC GTCCTGGTCT GCAGCCAGTA TATGGCCCAG 
GGCGTCTATG TCGTCTCCAA GGCGGAGTGG GGTGGTCGCG GCGCCAAATG GACCGTAGGC 
CTGGGCAACT ACCTCAGCTA CGCCATCATC CACCACACCG CCGGCTCCTA CTGCGAGACC 
CGTGCCCAGT GCAACGCCGT GCTGCAGAGC GTCCAGAACT ACCACATGGA CTCCCTGGGC 
TGGCCCGACA TCGGCTACAA CTTCCTGATC GGCGGAGACG GCAACGTGTA CGAGGGGCGT 
GGCTGGAACA ACATGGGCGC CCACGCCGCC GAGTGGAACC CCTACAGCAT CGGCATCAGC 
TTCCTGGGCA ACTACAACTG GGACACCCTG GAGCCGAACA TGATCTCCGC CGCCCAGCAG 
CTGCTCAACG ACGCCGTCAA CCGTGGCCAG CTCAGCTCCG GCTACATCCT GTACGGTCAT 
CGCCAGGTCA GCGCCACCGA ATGCCCCGGC ACTCACATCT GGAACGAGAT CCGCGGCTGG 
TCCCACTGGT CTGGTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_610409.1
CDS	31..588
Translation	MVSKVALLLAVLVCSQYMAQGVYVVSKAEWGGRGAKWTVGLGNYLSYAIIHHTAGSYCETRAQCNAVLQSVQNYHMDSLGWPDIGYNFLIGGDGNVYEGRGWNNMGAHAAEWNPYSIGISFLGNYNWDTLEPNMISAAQQLLNDAVNRGQLSSGYILYGHRQVSATECPGTHIWNEIRGWSHWSG

Target ORF information:

RefSeq Version	NM_136565.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster peptidoglycan recognition protein SC1b, transcript variant A (PGRP-SC1b), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_136565.2

ORF Insert Sequence:

ATGGTTTCCA AAGTGGCTCT CCTCCTCGCC GTCCTGGTCT GCAGCCAGTA TATGGCCCAG 
GGCGTCTATG TCGTCTCCAA GGCGGAGTGG GGTGGTCGCG GCGCCAAATG GACCGTAGGC 
CTGGGCAACT ACCTCAGCTA CGCCATCATC CACCACACCG CCGGCTCCTA CTGCGAGACC 
CGTGCCCAGT GCAACGCCGT GCTGCAGAGC GTCCAGAACT ACCACATGGA CTCCCTGGGC 
TGGCCCGACA TCGGCTACAA CTTCCTGATC GGCGGAGACG GCAACGTGTA CGAGGGGCGT 
GGCTGGAACA ACATGGGCGC CCACGCCGCC GAGTGGAACC CCTACAGCAT CGGCATCAGC 
TTCCTGGGCA ACTACAACTG GGACACCCTG GAGCCGAACA TGATCTCCGC CGCCCAGCAG 
CTGCTCAACG ACGCCGTCAA CCGTGGCCAG CTCAGCTCCG GCTACATCCT GTACGGTCAT 
CGCCAGGTCA GCGCCACCGA ATGCCCCGGC ACTCACATCT GGAACGAGAT CCGCGGCTGG 
TCCCACTGGT CTGGTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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PGRP-SC1b cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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