Tsp42En cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	Tsp42En
Entrez Gene ID	35624
Full Name	Tetraspanin 42En
Synonyms	BcDNA:RH02160,CG12839,Dm.Tsp42En,Dmel\CG12839
General protein information	Preferred Names Tetraspanin 42En Names CG12839 gene product from transcript CG12839-RB CG12839-PA CG12839-PB Tsp42En-PA Tsp42En-PB tetraspanin 42E tetraspanin 42En
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2R Map Location: 42E7-42E7

mRNA and Protein(s)

mRNA	Protein	Name
NM_078916.3	NP_523640.1	tetraspanin 42En, isoform A
NM_001273829.1	NP_001260758.1	tetraspanin 42En, isoform B

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Tsp42En gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Tsp42En cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa09090	NM_001273829.1 Latest version!	Drosophila melanogaster tetraspanin 42En, transcript variant B (Tsp42En), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OFa09090	NM_078916.3 Latest version!	Drosophila melanogaster tetraspanin 42En, transcript variant A (Tsp42En), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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2-4 Clone	40% OFF
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Tsp42En ( NM_078916.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_523640.1 Drosophila melanogaster tetraspanin 42En, transcript variant A (Tsp42En), mRNA.

Price & Availability↑

CloneID	OFa09090
Clone ID Related Accession (Same CDS sequence)	NM_078916.3 , NM_001273829.1
Accession Version	NM_078916.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 657bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	tetraspanin 42En, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). On Jan 16, 2013 this sequence version replaced NM_078916.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGACTGCC GCACATCGTT CCTGAAAGCC GTTCTTATCG TTCTCAATGT GCTGCTATCG 
CTGATTGGAG TGACGTTGAT TGCTCTGTCC GTGTACGAGC TGAACAGCTC CACGCCGGGC 
ACCTTCGAGC ACATCGCCAT CGTTGTCCAG ATCTTCGTGG GCACCTTCGT GGTCCTGACC 
TCGTTTCTGG GCTGCTTTGC CACCGCTCGG GTTTCCCTGG GACTGGTTTG GAGCTATGTG 
ATCTGCCTGC TGATCCTGCT GTGCCTGCAG ATTTATATTA TCGCGGCAGC CCACTCCACG 
GACTACGTGG AGCGATCCAA GAAGGATTTC CTGGCCACCT GGGCTGATCA AAGGACCAAT 
GTGGAGCGCA TATCGCTCCT TGAGCAAAAG TACTCCTGCT GCGGCCAGTT GGGCGCCCAT 
GACTACATCC TGATGGGACG GGGTATACCC TTGAGCTGCT ACAAGGATCA GGAGCGGCGC 
GAGTACAGCC TCTTCTCCGG GGGCTGCCTG CAGGCCGTGC AGGCGCATGC CACGGACAAC 
GTGGCCATCG GACTCATCAT CAAGTGGCTG CTGCTTCTGG TGGAGTTCGC CGCCCTGGGA 
GCCGCAACCC ACTTGGGCAT CACGGTGCGC AATAAATTGC GGCGCGAAAG ATTCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_523640.1
CDS	190..846
Translation	MDCRTSFLKAVLIVLNVLLSLIGVTLIALSVYELNSSTPGTFEHIAIVVQIFVGTFVVLTSFLGCFATARVSLGLVWSYVICLLILLCLQIYIIAAAHSTDYVERSKKDFLATWADQRTNVERISLLEQKYSCCGQLGAHDYILMGRGIPLSCYKDQERREYSLFSGGCLQAVQAHATDNVAIGLIIKWLLLLVEFAALGAATHLGITVRNKLRRERF

Target ORF information:

RefSeq Version	NM_078916.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster tetraspanin 42En, transcript variant A (Tsp42En), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_078916.3

ORF Insert Sequence:

ATGGACTGCC GCACATCGTT CCTGAAAGCC GTTCTTATCG TTCTCAATGT GCTGCTATCG 
CTGATTGGAG TGACGTTGAT TGCTCTGTCC GTGTACGAGC TGAACAGCTC CACGCCGGGC 
ACCTTCGAGC ACATCGCCAT CGTTGTCCAG ATCTTCGTGG GCACCTTCGT GGTCCTGACC 
TCGTTTCTGG GCTGCTTTGC CACCGCTCGG GTTTCCCTGG GACTGGTTTG GAGCTATGTG 
ATCTGCCTGC TGATCCTGCT GTGCCTGCAG ATTTATATTA TCGCGGCAGC CCACTCCACG 
GACTACGTGG AGCGATCCAA GAAGGATTTC CTGGCCACCT GGGCTGATCA AAGGACCAAT 
GTGGAGCGCA TATCGCTCCT TGAGCAAAAG TACTCCTGCT GCGGCCAGTT GGGCGCCCAT 
GACTACATCC TGATGGGACG GGGTATACCC TTGAGCTGCT ACAAGGATCA GGAGCGGCGC 
GAGTACAGCC TCTTCTCCGG GGGCTGCCTG CAGGCCGTGC AGGCGCATGC CACGGACAAC 
GTGGCCATCG GACTCATCAT CAAGTGGCTG CTGCTTCTGG TGGAGTTCGC CGCCCTGGGA 
GCCGCAACCC ACTTGGGCAT CACGGTGCGC AATAAATTGC GGCGCGAAAG ATTCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Tsp42En ( NM_001273829.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001260758.1 Drosophila melanogaster tetraspanin 42En, transcript variant B (Tsp42En), mRNA.

Price & Availability↑

CloneID	OFa09090
Clone ID Related Accession (Same CDS sequence)	NM_078916.3 , NM_001273829.1
Accession Version	NM_001273829.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 657bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	tetraspanin 42En, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGACTGCC GCACATCGTT CCTGAAAGCC GTTCTTATCG TTCTCAATGT GCTGCTATCG 
CTGATTGGAG TGACGTTGAT TGCTCTGTCC GTGTACGAGC TGAACAGCTC CACGCCGGGC 
ACCTTCGAGC ACATCGCCAT CGTTGTCCAG ATCTTCGTGG GCACCTTCGT GGTCCTGACC 
TCGTTTCTGG GCTGCTTTGC CACCGCTCGG GTTTCCCTGG GACTGGTTTG GAGCTATGTG 
ATCTGCCTGC TGATCCTGCT GTGCCTGCAG ATTTATATTA TCGCGGCAGC CCACTCCACG 
GACTACGTGG AGCGATCCAA GAAGGATTTC CTGGCCACCT GGGCTGATCA AAGGACCAAT 
GTGGAGCGCA TATCGCTCCT TGAGCAAAAG TACTCCTGCT GCGGCCAGTT GGGCGCCCAT 
GACTACATCC TGATGGGACG GGGTATACCC TTGAGCTGCT ACAAGGATCA GGAGCGGCGC 
GAGTACAGCC TCTTCTCCGG GGGCTGCCTG CAGGCCGTGC AGGCGCATGC CACGGACAAC 
GTGGCCATCG GACTCATCAT CAAGTGGCTG CTGCTTCTGG TGGAGTTCGC CGCCCTGGGA 
GCCGCAACCC ACTTGGGCAT CACGGTGCGC AATAAATTGC GGCGCGAAAG ATTCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001260758.1
CDS	190..846
Translation	MDCRTSFLKAVLIVLNVLLSLIGVTLIALSVYELNSSTPGTFEHIAIVVQIFVGTFVVLTSFLGCFATARVSLGLVWSYVICLLILLCLQIYIIAAAHSTDYVERSKKDFLATWADQRTNVERISLLEQKYSCCGQLGAHDYILMGRGIPLSCYKDQERREYSLFSGGCLQAVQAHATDNVAIGLIIKWLLLLVEFAALGAATHLGITVRNKLRRERF

Target ORF information:

RefSeq Version	NM_001273829.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster tetraspanin 42En, transcript variant B (Tsp42En), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001273829.1

ORF Insert Sequence:

ATGGACTGCC GCACATCGTT CCTGAAAGCC GTTCTTATCG TTCTCAATGT GCTGCTATCG 
CTGATTGGAG TGACGTTGAT TGCTCTGTCC GTGTACGAGC TGAACAGCTC CACGCCGGGC 
ACCTTCGAGC ACATCGCCAT CGTTGTCCAG ATCTTCGTGG GCACCTTCGT GGTCCTGACC 
TCGTTTCTGG GCTGCTTTGC CACCGCTCGG GTTTCCCTGG GACTGGTTTG GAGCTATGTG 
ATCTGCCTGC TGATCCTGCT GTGCCTGCAG ATTTATATTA TCGCGGCAGC CCACTCCACG 
GACTACGTGG AGCGATCCAA GAAGGATTTC CTGGCCACCT GGGCTGATCA AAGGACCAAT 
GTGGAGCGCA TATCGCTCCT TGAGCAAAAG TACTCCTGCT GCGGCCAGTT GGGCGCCCAT 
GACTACATCC TGATGGGACG GGGTATACCC TTGAGCTGCT ACAAGGATCA GGAGCGGCGC 
GAGTACAGCC TCTTCTCCGG GGGCTGCCTG CAGGCCGTGC AGGCGCATGC CACGGACAAC 
GTGGCCATCG GACTCATCAT CAAGTGGCTG CTGCTTCTGG TGGAGTTCGC CGCCCTGGGA 
GCCGCAACCC ACTTGGGCAT CACGGTGCGC AATAAATTGC GGCGCGAAAG ATTCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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Tsp42En cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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