SmydA-5 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	SmydA-5
Entrez Gene ID	35538
Full Name	SET and MYND domain containing, arthropod-specific, member 5
Synonyms	CG14590,Dmel\CG14590
General protein information	Preferred Names SET and MYND domain containing, arthropod-specific, member 5 Names CG14590 gene product from transcript CG14590-RA CG14590-PA SmydA-5-PA
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2R Map Location: 42A9-42A9

mRNA and Protein(s)

mRNA	Protein	Name
NM_136358.3	NP_610202.3	SET and MYND domain containing, arthropod-specific, member 5

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following SmydA-5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SmydA-5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa12423	NM_136358.3 Latest version!	Drosophila melanogaster SET and MYND domain containing, arthropod-specific, member 5 (SmydA-5), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

SmydA-5 ( NM_136358.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_610202.3 Drosophila melanogaster SET and MYND domain containing, arthropod-specific, member 5 (SmydA-5), mRNA.

Price & Availability↑

CloneID	OFa12423
Clone ID Related Accession (Same CDS sequence)	NM_136358.3
Accession Version	NM_136358.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1662bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	SET and MYND domain containing, arthropod-specific, member 5
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). On Jan 31, 2011 this sequence version replaced NM_136358.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGTGTCAA GCACGGAATG TCCTGTTTGC GGAGTTGCTG CCTCACAAGC GTGCACTAGG 
TGCAAAATGG TGCGATACTG CGACCGAGAG CACCAGAAGC AGCACTGGCC GCAGCACAAG 
CGCAGATGTA GGCCATTCAG CGAGGAGCAG GATGCCGAGC TGGGCAGATA TTTGAAGGTT 
ACCCAGAACA TAGCAGCCGG GCAAATAGTC TTCATTGAGG AGCCCCTAGT GGTGGGTCCC 
AAGTGGTATC TCTCCGACGC AGACAAGGAG GCCTCTAACG TTCCGTGTGT AGGCTGTTAC 
ACTCCGTGCC GTCTGGGGAA GCACCAGTGT CGAAGATGCC GTTGGCCAGT CTGCAGCGCA 
GGCTGCAAGC ACGAGTCAAT GGAATGCAGC GTGCTTAGCC TCGGATCGGG TTCACCAACT 
CGGGCAGATG CCCGCTCATT GAACGACTAC TTCAGGGGCG ATGCTCTTTT GGTGCTCAAA 
TGCCTTCTGT TGCAGCGACA GAGTCCCACG AAATGGTCCG CGTTGTTAGA GATGCAGTCT 
CATGAGGAGG AGCGTAAGGG CACCGATCTG TACGAGGAAG CAGAGAAGCG AGTAGTGACC 
TACCTTCAAA AGCGGTTTTT ATGTAGACTT AAGCAAACTA ATCCAAACCT TCTGACCGAT 
TGTGGACCAG AGATGCTGCA TCGGCTTTGC GGCATCATCG AAACAAACTT TATGGTTATC 
GAACTCCCGA GTGGCGTGGA ACTCAGCGGG TTGTTCCGGC AGGCCTGCAT GATGGAGCAT 
GCTTGTCAGC CCAACTGCGA CTTTCAGTTT GATAACAAGA CTCAGCAAGT TGCTGTGCGT 
GCTGGCTGTG ACTTGCGAAA AGGCGACCAC CTACGGATTA CATACACAAA TATCCTATGG 
GGCACGCAAC TTCGCCAGCA CCATCTTCGA CTAACGAAGC ATTTCAGCTG CCGCTGCAGC 
CGCTGTCTCG ATCCAACGGA ATATGGCACC TATATAAGTG CGCTGACTTG TCTGGGGGAT 
GTAAATCAGA CCTGTGGAGG AACCCACTTG CCCGTGGATC CACTGGACGA GAACACACAG 
TGGAAGTGCG ACACTTGCCC AATGATAGTG GATGGAGCTT ACGTGGCTGA ACTGCAGTCC 
CACATGACCG AGCAGGTGGA GGGCTTATTA GCCGGATGCC CCTCCGCGAA TCAGGTGGAA 
CTTCTGTTGG CCCGCCTGAC CCATATGTTG CATCCAAATC ATTTTCACAC GTTCAACCTA 
AAGCACACAT TAATCCAGCT GTATGGTAAC GAAGCTGGCT TGGAGTTGGG CGTGCTGAGC 
AACACGCAGC TGGAGCGCAA ACTGAGGCTC TGCGGTGAGC TCTACAACGT ATGCCGGCGA 
CTGGATCCAT ATAGCATTAA GCTGGCTATC TATGTCACGG TCATCCTGAT CGAGGTCGCC 
CACACGCTGC AGGAGCAGGC ACGAAGGGCA CCAGCAGAAG GAACTTCCCT CTTGGGTCTT 
GCGCAAAGCC GTCTTAGGGA AGCGCATATG GTTTTGGAGA AAGAGCAAGA ATCAGTTGCC 
GGCAAAAAGC TAAACGAAAA ATTGCAGATG GAAATCTTCG AGTGCGAAAA ACTAATTTTA 
GCTCTTGCCT ATAATCAAGA TCACGAAGCC AATACAAAAT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_610202.3
CDS	7..1668
Translation	MVSSTECPVCGVAASQACTRCKMVRYCDREHQKQHWPQHKRRCRPFSEEQDAELGRYLKVTQNIAAGQIVFIEEPLVVGPKWYLSDADKEASNVPCVGCYTPCRLGKHQCRRCRWPVCSAGCKHESMECSVLSLGSGSPTRADARSLNDYFRGDALLVLKCLLLQRQSPTKWSALLEMQSHEEERKGTDLYEEAEKRVVTYLQKRFLCRLKQTNPNLLTDCGPEMLHRLCGIIETNFMVIELPSGVELSGLFRQACMMEHACQPNCDFQFDNKTQQVAVRAGCDLRKGDHLRITYTNILWGTQLRQHHLRLTKHFSCRCSRCLDPTEYGTYISALTCLGDVNQTCGGTHLPVDPLDENTQWKCDTCPMIVDGAYVAELQSHMTEQVEGLLAGCPSANQVELLLARLTHMLHPNHFHTFNLKHTLIQLYGNEAGLELGVLSNTQLERKLRLCGELYNVCRRLDPYSIKLAIYVTVILIEVAHTLQEQARRAPAEGTSLLGLAQSRLREAHMVLEKEQESVAGKKLNEKLQMEIFECEKLILALAYNQDHEANTK

Target ORF information:

RefSeq Version	NM_136358.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster SET and MYND domain containing, arthropod-specific, member 5 (SmydA-5), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_136358.3

ORF Insert Sequence:

ATGGTGTCAA GCACGGAATG TCCTGTTTGC GGAGTTGCTG CCTCACAAGC GTGCACTAGG 
TGCAAAATGG TGCGATACTG CGACCGAGAG CACCAGAAGC AGCACTGGCC GCAGCACAAG 
CGCAGATGTA GGCCATTCAG CGAGGAGCAG GATGCCGAGC TGGGCAGATA TTTGAAGGTT 
ACCCAGAACA TAGCAGCCGG GCAAATAGTC TTCATTGAGG AGCCCCTAGT GGTGGGTCCC 
AAGTGGTATC TCTCCGACGC AGACAAGGAG GCCTCTAACG TTCCGTGTGT AGGCTGTTAC 
ACTCCGTGCC GTCTGGGGAA GCACCAGTGT CGAAGATGCC GTTGGCCAGT CTGCAGCGCA 
GGCTGCAAGC ACGAGTCAAT GGAATGCAGC GTGCTTAGCC TCGGATCGGG TTCACCAACT 
CGGGCAGATG CCCGCTCATT GAACGACTAC TTCAGGGGCG ATGCTCTTTT GGTGCTCAAA 
TGCCTTCTGT TGCAGCGACA GAGTCCCACG AAATGGTCCG CGTTGTTAGA GATGCAGTCT 
CATGAGGAGG AGCGTAAGGG CACCGATCTG TACGAGGAAG CAGAGAAGCG AGTAGTGACC 
TACCTTCAAA AGCGGTTTTT ATGTAGACTT AAGCAAACTA ATCCAAACCT TCTGACCGAT 
TGTGGACCAG AGATGCTGCA TCGGCTTTGC GGCATCATCG AAACAAACTT TATGGTTATC 
GAACTCCCGA GTGGCGTGGA ACTCAGCGGG TTGTTCCGGC AGGCCTGCAT GATGGAGCAT 
GCTTGTCAGC CCAACTGCGA CTTTCAGTTT GATAACAAGA CTCAGCAAGT TGCTGTGCGT 
GCTGGCTGTG ACTTGCGAAA AGGCGACCAC CTACGGATTA CATACACAAA TATCCTATGG 
GGCACGCAAC TTCGCCAGCA CCATCTTCGA CTAACGAAGC ATTTCAGCTG CCGCTGCAGC 
CGCTGTCTCG ATCCAACGGA ATATGGCACC TATATAAGTG CGCTGACTTG TCTGGGGGAT 
GTAAATCAGA CCTGTGGAGG AACCCACTTG CCCGTGGATC CACTGGACGA GAACACACAG 
TGGAAGTGCG ACACTTGCCC AATGATAGTG GATGGAGCTT ACGTGGCTGA ACTGCAGTCC 
CACATGACCG AGCAGGTGGA GGGCTTATTA GCCGGATGCC CCTCCGCGAA TCAGGTGGAA 
CTTCTGTTGG CCCGCCTGAC CCATATGTTG CATCCAAATC ATTTTCACAC GTTCAACCTA 
AAGCACACAT TAATCCAGCT GTATGGTAAC GAAGCTGGCT TGGAGTTGGG CGTGCTGAGC 
AACACGCAGC TGGAGCGCAA ACTGAGGCTC TGCGGTGAGC TCTACAACGT ATGCCGGCGA 
CTGGATCCAT ATAGCATTAA GCTGGCTATC TATGTCACGG TCATCCTGAT CGAGGTCGCC 
CACACGCTGC AGGAGCAGGC ACGAAGGGCA CCAGCAGAAG GAACTTCCCT CTTGGGTCTT 
GCGCAAAGCC GTCTTAGGGA AGCGCATATG GTTTTGGAGA AAGAGCAAGA ATCAGTTGCC 
GGCAAAAAGC TAAACGAAAA ATTGCAGATG GAAATCTTCG AGTGCGAAAA ACTAATTTTA 
GCTCTTGCCT ATAATCAAGA TCACGAAGCC AATACAAAAT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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SmydA-5 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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