CG3793 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG3793
Entrez Gene ID	34928
Full Name	CG3793 gene product from transcript CG3793-RB
Synonyms	BG:DS09217.4,Dmel\CG3793
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2L Map Location: 35D4-35D4

mRNA and Protein(s)

mRNA	Protein	Name
NM_001259109.2	NP_001246038.1	uncharacterized protein, isoform B
NM_135922.3	NP_609766.1	uncharacterized protein, isoform A

Pathways from BioSystems

Homologies

	LCMT1	XP_001099127.1
Drosophila melanogaster (fruit fly)	CG3793	NP_609766.1
Caenorhabditis elegans (roundworm)	CELE_B0285.4	NP_497875.1
Oryza sativa (rice)	Os06g0140100	NP_001056749.1
Xenopus tropicalis (tropical clawed frog)	lcmt1	NP_001016033.1
Pan troglodytes (chimpanzee)	LCMT1	XP_001164891.1
Canis lupus familiaris (dog)	LCMT1	XP_005621453.1
Bos taurus (cattle)	LCMT1	NP_001069956.1
Mus musculus (house mouse)	Lcmt1	NP_079580.2
Gallus gallus (chicken)	LCMT1	NP_001006167.2
Arabidopsis thaliana (thale cress)	AT1G02100	NP_973741.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP008768	XP_314892.4
Homo sapiens (human)	LCMT1	NP_057393.2
Rattus norvegicus (Norway rat)	Lcmt1	NP_955437.1
Danio rerio (zebrafish)	lcmt1	NP_001004645.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG3793 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG3793 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa14717	NM_001259109.2 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant B (CG3793), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
OFa16798	NM_135922.3 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant A (CG3793), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

ORF Online Only Promotion

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5 or more Clone	50% OFF
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG3793 ( NM_001259109.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001246038.1 Drosophila melanogaster uncharacterized protein, transcript variant B (CG3793), mRNA.

Price & Availability↑

CloneID	OFa14717
Clone ID Related Accession (Same CDS sequence)	NM_001259109.2
Accession Version	NM_001259109.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1026bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jan 16, 2013 this sequence version replaced NM_001259109.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGAGCCGC CAGCGTCGGC CGGAATCGCC GGCTCGACGC ACAAGTTCCA TCCGTGCGAC 
GAGGCTGTGA TAGCCACCAA CGACGATGCC AGCGATTGCA AGCGATGTGC GGTGCGCTTG 
GGCTACTGGA AGGACGACTA CATCGGGTAC TTTGTGCGCA ACCAAGAGCG CAAGGCGCCG 
GAGATCAATC GCGGCTACTT TGCCCGTGTC AAGGGCGTGG AGATGTGCGT CGAGAAGTTT 
CTAAAGAAAA CCTCGGGCAA CTGCCAGATC ATCAATTTGG GCTGCGGCTT CGACACACTC 
TACTTCCGGC TGAGGGACAC CGCCCACCAG GTGAAGAACT TCATTGAGCT GGACTTCCCC 
ACGGTCACCG CCCGCAAGTG CTACACAATT AAGCGCAACA AGGCCCTGCT GGCCAGGATT 
CACGACGAGG ATGGTGAGGT GCGGCTCAGT CCCACGGATC TGCATGGACC AAGCTACCAC 
CTGATGGGCG TTGACCTGCG CAACCTCGAC GAGGTGGACA GCAAGCTGCA GCAGGCAGAA 
GTTGATTACT CCCTGCCCAC CATATTTCTC GCCGAGTGCG TTCTGGTCTA TATCGAGGCG 
CAAAACTGCC GTAACCTGCT CAAATGGATT GCGCAAAAGT TCCAAGCAGC CGTCTTTGTC 
AACTACGAAC AGGTCAACAT GAACGACCGT TTCGGCGATG TGATGCTCAA CAATCTGCGC 
GGACGCGGCT GCAGCCTGGC CGGCGTTGAA TCCTGCTTGT CGCTGGATAC GCAGAGGAAC 
CGCTTCAAGG ACAGCGGCTG GACTGGCGCC CGCGCCTGGG ACATGGTCCA GGTGTACGAG 
AGCATCTCGG CGGCCGAGAG GCAGCGAATC GAGCGGCTGG AAATGCTGGA CGAGGGTGAA 
CTGCTGCTCC AGCTTTTCCA GCACTACTGC CTGGTGGTCG CCTGGCTGGG CGTGGCCTTT 
CAGGATATAG ATATCACGTG CGTGCCAGTC GTCGAAGAGT TAATGTCCTC GCTGAACATT 
GACTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001246038.1
CDS	157..1182
Translation	MEPPASAGIAGSTHKFHPCDEAVIATNDDASDCKRCAVRLGYWKDDYIGYFVRNQERKAPEINRGYFARVKGVEMCVEKFLKKTSGNCQIINLGCGFDTLYFRLRDTAHQVKNFIELDFPTVTARKCYTIKRNKALLARIHDEDGEVRLSPTDLHGPSYHLMGVDLRNLDEVDSKLQQAEVDYSLPTIFLAECVLVYIEAQNCRNLLKWIAQKFQAAVFVNYEQVNMNDRFGDVMLNNLRGRGCSLAGVESCLSLDTQRNRFKDSGWTGARAWDMVQVYESISAAERQRIERLEMLDEGELLLQLFQHYCLVVAWLGVAFQDIDITCVPVVEELMSSLNID

Target ORF information:

RefSeq Version	NM_001259109.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant B (CG3793), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001259109.2

ORF Insert Sequence:

ATGGAGCCGC CAGCGTCGGC CGGAATCGCC GGCTCGACGC ACAAGTTCCA TCCGTGCGAC 
GAGGCTGTGA TAGCCACCAA CGACGATGCC AGCGATTGCA AGCGATGTGC GGTGCGCTTG 
GGCTACTGGA AGGACGACTA CATCGGGTAC TTTGTGCGCA ACCAAGAGCG CAAGGCGCCG 
GAGATCAATC GCGGCTACTT TGCCCGTGTC AAGGGCGTGG AGATGTGCGT CGAGAAGTTT 
CTAAAGAAAA CCTCGGGCAA CTGCCAGATC ATCAATTTGG GCTGCGGCTT CGACACACTC 
TACTTCCGGC TGAGGGACAC CGCCCACCAG GTGAAGAACT TCATTGAGCT GGACTTCCCC 
ACGGTCACCG CCCGCAAGTG CTACACAATT AAGCGCAACA AGGCCCTGCT GGCCAGGATT 
CACGACGAGG ATGGTGAGGT GCGGCTCAGT CCCACGGATC TGCATGGACC AAGCTACCAC 
CTGATGGGCG TTGACCTGCG CAACCTCGAC GAGGTGGACA GCAAGCTGCA GCAGGCAGAA 
GTTGATTACT CCCTGCCCAC CATATTTCTC GCCGAGTGCG TTCTGGTCTA TATCGAGGCG 
CAAAACTGCC GTAACCTGCT CAAATGGATT GCGCAAAAGT TCCAAGCAGC CGTCTTTGTC 
AACTACGAAC AGGTCAACAT GAACGACCGT TTCGGCGATG TGATGCTCAA CAATCTGCGC 
GGACGCGGCT GCAGCCTGGC CGGCGTTGAA TCCTGCTTGT CGCTGGATAC GCAGAGGAAC 
CGCTTCAAGG ACAGCGGCTG GACTGGCGCC CGCGCCTGGG ACATGGTCCA GGTGTACGAG 
AGCATCTCGG CGGCCGAGAG GCAGCGAATC GAGCGGCTGG AAATGCTGGA CGAGGGTGAA 
CTGCTGCTCC AGCTTTTCCA GCACTACTGC CTGGTGGTCG CCTGGCTGGG CGTGGCCTTT 
CAGGATATAG ATATCACGTG CGTGCCAGTC GTCGAAGAGT TAATGTCCTC GCTGAACATT 
GACTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CG3793 ( NM_135922.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_609766.1 Drosophila melanogaster uncharacterized protein, transcript variant A (CG3793), mRNA.

Price & Availability↑

CloneID	OFa16798
Clone ID Related Accession (Same CDS sequence)	NM_135922.3
Accession Version	NM_135922.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1014bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jan 16, 2013 this sequence version replaced NM_135922.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGAGCCGC CAGCGTCGGC CGGAATCGCC GGCTCGACGC ACAAGTTCCA TCCGTGCGAC 
GAGGCTGTGA TAGCCACCAA CGACGATGCC AGCGATTGCA AGCGATGTGC GGTGCGCTTG 
GGCTACTGGA AGGACGACTA CATCGGGTAC TTTGTGCGCA ACCAAGAGCG CAAGGCGCCG 
GAGATCAATC GCGGCTACTT TGCCCGTGTC AAGGGCGTGG AGATGTGCGT CGAGAAGTTT 
CTAAAGAAAA CCTCGGGCAA CTGCCAGATC ATCAATTTGG GCTGCGGCTT CGACACACTC 
TACTTCCGGC TGAGGGACAC CGCCCACCAG GTGAAGAACT TCATTGAGCT GGACTTCCCC 
ACGGTCACCG CCCGCAAGTG CTACACAATT AAGCGCAACA AGGCCCTGCT GGCCAGGATT 
CACGACGAGG ATGGTGAGGT GCGGCTCAGT CCCACGGATC TGCATGGACC AAGCTACCAC 
CTGATGGGCG TTGACCTGCG CAACCTCGAC GAGGTGGACA GCAAGCTGCA GCAGGCAGAA 
GTTGATTACT CCCTGCCCAC CATATTTCTC GCCGAGTGCG TTCTGGTCTA TATCGAGGCG 
CAAAACTGCC GTAACCTGCT CAAATGGATT GCGCAAAAGT TCCAAGCAGC CGTCTTTGTC 
AACTACGAAC AGGTCAACAT GAACGACCGT TTCGGCGATG TGATGCTCAA CAATCTGCGC 
GGACGCGGCT GCAGCCTGGC CGGCGTTGAA TCCTGCTTGT CGCTGGATAC GCAGAGGAAC 
CGCTTCAAGG ACAGCGGCTG GACTGGCGCC CGCGCCTGGG ACATGGTCCA GGTGTACGAG 
AGCATCTCGG CGGCCGAGAG GCAGCGAATC GAGCGGCTGG AAATGCTGGA CGAGGGTGAA 
CTGCTGCTCC AGCTTTTCCA GCACTACTGC CTGGTGGTCG CCTGGCTGGG CGTGGCCTTT 
CAGGATATAG ATATCACCGT CGAAGAGTTA ATGTCCTCGC TGAACATTGA CTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_609766.1
CDS	157..1170
Translation	MEPPASAGIAGSTHKFHPCDEAVIATNDDASDCKRCAVRLGYWKDDYIGYFVRNQERKAPEINRGYFARVKGVEMCVEKFLKKTSGNCQIINLGCGFDTLYFRLRDTAHQVKNFIELDFPTVTARKCYTIKRNKALLARIHDEDGEVRLSPTDLHGPSYHLMGVDLRNLDEVDSKLQQAEVDYSLPTIFLAECVLVYIEAQNCRNLLKWIAQKFQAAVFVNYEQVNMNDRFGDVMLNNLRGRGCSLAGVESCLSLDTQRNRFKDSGWTGARAWDMVQVYESISAAERQRIERLEMLDEGELLLQLFQHYCLVVAWLGVAFQDIDITVEELMSSLNID

Target ORF information:

RefSeq Version	NM_135922.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant A (CG3793), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_135922.3

ORF Insert Sequence:

ATGGAGCCGC CAGCGTCGGC CGGAATCGCC GGCTCGACGC ACAAGTTCCA TCCGTGCGAC 
GAGGCTGTGA TAGCCACCAA CGACGATGCC AGCGATTGCA AGCGATGTGC GGTGCGCTTG 
GGCTACTGGA AGGACGACTA CATCGGGTAC TTTGTGCGCA ACCAAGAGCG CAAGGCGCCG 
GAGATCAATC GCGGCTACTT TGCCCGTGTC AAGGGCGTGG AGATGTGCGT CGAGAAGTTT 
CTAAAGAAAA CCTCGGGCAA CTGCCAGATC ATCAATTTGG GCTGCGGCTT CGACACACTC 
TACTTCCGGC TGAGGGACAC CGCCCACCAG GTGAAGAACT TCATTGAGCT GGACTTCCCC 
ACGGTCACCG CCCGCAAGTG CTACACAATT AAGCGCAACA AGGCCCTGCT GGCCAGGATT 
CACGACGAGG ATGGTGAGGT GCGGCTCAGT CCCACGGATC TGCATGGACC AAGCTACCAC 
CTGATGGGCG TTGACCTGCG CAACCTCGAC GAGGTGGACA GCAAGCTGCA GCAGGCAGAA 
GTTGATTACT CCCTGCCCAC CATATTTCTC GCCGAGTGCG TTCTGGTCTA TATCGAGGCG 
CAAAACTGCC GTAACCTGCT CAAATGGATT GCGCAAAAGT TCCAAGCAGC CGTCTTTGTC 
AACTACGAAC AGGTCAACAT GAACGACCGT TTCGGCGATG TGATGCTCAA CAATCTGCGC 
GGACGCGGCT GCAGCCTGGC CGGCGTTGAA TCCTGCTTGT CGCTGGATAC GCAGAGGAAC 
CGCTTCAAGG ACAGCGGCTG GACTGGCGCC CGCGCCTGGG ACATGGTCCA GGTGTACGAG 
AGCATCTCGG CGGCCGAGAG GCAGCGAATC GAGCGGCTGG AAATGCTGGA CGAGGGTGAA 
CTGCTGCTCC AGCTTTTCCA GCACTACTGC CTGGTGGTCG CCTGGCTGGG CGTGGCCTTT 
CAGGATATAG ATATCACCGT CGAAGAGTTA ATGTCCTCGC TGAACATTGA CTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG3793 cDNA ORF clone, Drosophila melanogaster(fruit fly)

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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