YL-1 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	YL-1
Entrez Gene ID	34516
Full Name	CG4621 gene product from transcript CG4621-RB
Synonyms	CG4621,Dmel\CG4621,dYL-1,dYL1
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2L Map Location: 32C1-32C1

mRNA and Protein(s)

mRNA	Protein	Name
NM_001298894.1	NP_001285823.1	YL-1, isoform B
NM_135631.4	NP_609475.1	YL-1, isoform A

Pathways from BioSystems

Homologies

	VPS72	XP_001104866.1
Mus musculus (house mouse)	Vps72	NP_033362.2
Drosophila melanogaster (fruit fly)	YL-1	NP_609475.1
Canis lupus familiaris (dog)	VPS72	XP_533052.1
Xenopus tropicalis (tropical clawed frog)	vps72	XP_002937316.2
Bos taurus (cattle)	VPS72	NP_001015658.1
Rattus norvegicus (Norway rat)	Vps72	NP_001101165.1
Danio rerio (zebrafish)	vps72	NP_001076413.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP001565	XP_321546.3
Homo sapiens (human)	VPS72	NP_005988.1
Pan troglodytes (chimpanzee)	VPS72	XP_001166408.2
Gallus gallus (chicken)	LOC100859689	XP_004948385.1
Gallus gallus (chicken)	VPS72	XP_004948416.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The study reports the crystal structure of the H2A.Z-binding domain of Drosophila melanogaster YL1 (dYL1-Z) in complex with an H2A.Z-H2B dimer at 1.9-A resolution.
Title: Structural basis of H2A.Z recognition by SRCAP chromatin-remodeling subunit YL1.

The following YL-1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the YL-1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa14436	NM_001298894.1 Latest version!	Drosophila melanogaster YL-1, transcript variant B (YL-1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
OFa14436	NM_135631.4 Latest version!	Drosophila melanogaster YL-1, transcript variant A (YL-1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

YL-1 ( NM_001298894.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001285823.1 Drosophila melanogaster YL-1, transcript variant B (YL-1), mRNA.

Price & Availability↑

CloneID	OFa14436
Clone ID Related Accession (Same CDS sequence)	NM_001298894.1 , NM_135631.4
Accession Version	NM_001298894.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1056bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	YL-1, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCTGCCT CGCGATCACG GCGCAACAAT GCCGGCAACA AAATAGCTCA TTTGCTCAAT 
GAGGAAGAGG AGGACGACTT TTACAAAACG TCCTATGGTG GATTTCAGGA GGACGAAGAG 
GATAAGGAAT ACGAGCAAAA AGACGAAGAG GAAGATGTGG TTGACTCCGA CTTCAGTATC 
GATGAGAACG ACGAGCCCGT TTCGGATCAG GAAGAGGCGC CCGAGAAAAA GCGGAAACGC 
GGTGTCGTTA ACACAAAGGC TTATAAGGAA ACCAAGCCTG CAGTCAAAAA GGAAACAAAG 
GCAACGCCGG CCCTGCACAA GAAACGACCT GGTGGTGGGG TAACGAAACG GCGGCCACGT 
CCACGCTTCA CGGTCCTCGA TTCCGGCCGC AAATCCATAC GCACTTCCAC GGCCATCAAG 
ACACAGGCTA CCAAAATACG CCTCAAAGAG TTGGACGATG CCCGCAAGCG CAAAAAGAAG 
AAGGTGCGCG TGGAGGACTA CATGCCCACG CAGGAGGAGC TGCTGGAGGA GGCCAAAATA 
ACCGAGGAAG AAAACACTAA ATCTTTGGAG AAATTCCAGA AAATGGAGCT GGAGAAGAAG 
AAATCACGTC CCACCAAGCG CACGTTCTCC GGACCCACGA TACGCTACCA CTCACTAACC 
ATGCCAGCGA TGCGAAAGCC CACTCGCGGA GCAAACCCTG CGGTCGATTC AAAGGATCTT 
GCTGGGAAGT GCGAACGCAC ATTCGTTACA ATCGAGAACG ATTTCAATGA CAAGGTGTTT 
CAAAGCCTCT TCCGCCACAA GGCGCCTCCC AAAGCCAGCA ATGGCATCTG TCCAATCACC 
AGGCTGCCAG CCCGTTACTT TGACCCGATC ACACAGCAGC CATACTACAG CATCCAGGCC 
TTCAAAATTC TGCGCGAAGC CTACTACATG CAGCTGGAAC AGCAAGGCGG CGGCAGCGAG 
CAACCCGAAC TGGCCAAATG GCTGGAATGG CGCAAGCTGG TCAAGGAGAA TCGTCTGAAG 
GCTTCGGCAG CTGCCAGCAA AAACGGAGAT AACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001285823.1
CDS	112..1167
Translation	MAASRSRRNNAGNKIAHLLNEEEEDDFYKTSYGGFQEDEEDKEYEQKDEEEDVVDSDFSIDENDEPVSDQEEAPEKKRKRGVVNTKAYKETKPAVKKETKATPALHKKRPGGGVTKRRPRPRFTVLDSGRKSIRTSTAIKTQATKIRLKELDDARKRKKKKVRVEDYMPTQEELLEEAKITEEENTKSLEKFQKMELEKKKSRPTKRTFSGPTIRYHSLTMPAMRKPTRGANPAVDSKDLAGKCERTFVTIENDFNDKVFQSLFRHKAPPKASNGICPITRLPARYFDPITQQPYYSIQAFKILREAYYMQLEQQGGGSEQPELAKWLEWRKLVKENRLKASAAASKNGDN

Target ORF information:

RefSeq Version	NM_001298894.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster YL-1, transcript variant B (YL-1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001298894.1

ORF Insert Sequence:

ATGGCTGCCT CGCGATCACG GCGCAACAAT GCCGGCAACA AAATAGCTCA TTTGCTCAAT 
GAGGAAGAGG AGGACGACTT TTACAAAACG TCCTATGGTG GATTTCAGGA GGACGAAGAG 
GATAAGGAAT ACGAGCAAAA AGACGAAGAG GAAGATGTGG TTGACTCCGA CTTCAGTATC 
GATGAGAACG ACGAGCCCGT TTCGGATCAG GAAGAGGCGC CCGAGAAAAA GCGGAAACGC 
GGTGTCGTTA ACACAAAGGC TTATAAGGAA ACCAAGCCTG CAGTCAAAAA GGAAACAAAG 
GCAACGCCGG CCCTGCACAA GAAACGACCT GGTGGTGGGG TAACGAAACG GCGGCCACGT 
CCACGCTTCA CGGTCCTCGA TTCCGGCCGC AAATCCATAC GCACTTCCAC GGCCATCAAG 
ACACAGGCTA CCAAAATACG CCTCAAAGAG TTGGACGATG CCCGCAAGCG CAAAAAGAAG 
AAGGTGCGCG TGGAGGACTA CATGCCCACG CAGGAGGAGC TGCTGGAGGA GGCCAAAATA 
ACCGAGGAAG AAAACACTAA ATCTTTGGAG AAATTCCAGA AAATGGAGCT GGAGAAGAAG 
AAATCACGTC CCACCAAGCG CACGTTCTCC GGACCCACGA TACGCTACCA CTCACTAACC 
ATGCCAGCGA TGCGAAAGCC CACTCGCGGA GCAAACCCTG CGGTCGATTC AAAGGATCTT 
GCTGGGAAGT GCGAACGCAC ATTCGTTACA ATCGAGAACG ATTTCAATGA CAAGGTGTTT 
CAAAGCCTCT TCCGCCACAA GGCGCCTCCC AAAGCCAGCA ATGGCATCTG TCCAATCACC 
AGGCTGCCAG CCCGTTACTT TGACCCGATC ACACAGCAGC CATACTACAG CATCCAGGCC 
TTCAAAATTC TGCGCGAAGC CTACTACATG CAGCTGGAAC AGCAAGGCGG CGGCAGCGAG 
CAACCCGAAC TGGCCAAATG GCTGGAATGG CGCAAGCTGG TCAAGGAGAA TCGTCTGAAG 
GCTTCGGCAG CTGCCAGCAA AAACGGAGAT AACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

YL-1 ( NM_135631.4 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_609475.1 Drosophila melanogaster YL-1, transcript variant A (YL-1), mRNA.

Price & Availability↑

CloneID	OFa14436
Clone ID Related Accession (Same CDS sequence)	NM_001298894.1 , NM_135631.4
Accession Version	NM_135631.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1056bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	YL-1, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jul 15, 2014 this sequence version replaced NM_135631.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCTGCCT CGCGATCACG GCGCAACAAT GCCGGCAACA AAATAGCTCA TTTGCTCAAT 
GAGGAAGAGG AGGACGACTT TTACAAAACG TCCTATGGTG GATTTCAGGA GGACGAAGAG 
GATAAGGAAT ACGAGCAAAA AGACGAAGAG GAAGATGTGG TTGACTCCGA CTTCAGTATC 
GATGAGAACG ACGAGCCCGT TTCGGATCAG GAAGAGGCGC CCGAGAAAAA GCGGAAACGC 
GGTGTCGTTA ACACAAAGGC TTATAAGGAA ACCAAGCCTG CAGTCAAAAA GGAAACAAAG 
GCAACGCCGG CCCTGCACAA GAAACGACCT GGTGGTGGGG TAACGAAACG GCGGCCACGT 
CCACGCTTCA CGGTCCTCGA TTCCGGCCGC AAATCCATAC GCACTTCCAC GGCCATCAAG 
ACACAGGCTA CCAAAATACG CCTCAAAGAG TTGGACGATG CCCGCAAGCG CAAAAAGAAG 
AAGGTGCGCG TGGAGGACTA CATGCCCACG CAGGAGGAGC TGCTGGAGGA GGCCAAAATA 
ACCGAGGAAG AAAACACTAA ATCTTTGGAG AAATTCCAGA AAATGGAGCT GGAGAAGAAG 
AAATCACGTC CCACCAAGCG CACGTTCTCC GGACCCACGA TACGCTACCA CTCACTAACC 
ATGCCAGCGA TGCGAAAGCC CACTCGCGGA GCAAACCCTG CGGTCGATTC AAAGGATCTT 
GCTGGGAAGT GCGAACGCAC ATTCGTTACA ATCGAGAACG ATTTCAATGA CAAGGTGTTT 
CAAAGCCTCT TCCGCCACAA GGCGCCTCCC AAAGCCAGCA ATGGCATCTG TCCAATCACC 
AGGCTGCCAG CCCGTTACTT TGACCCGATC ACACAGCAGC CATACTACAG CATCCAGGCC 
TTCAAAATTC TGCGCGAAGC CTACTACATG CAGCTGGAAC AGCAAGGCGG CGGCAGCGAG 
CAACCCGAAC TGGCCAAATG GCTGGAATGG CGCAAGCTGG TCAAGGAGAA TCGTCTGAAG 
GCTTCGGCAG CTGCCAGCAA AAACGGAGAT AACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_609475.1
CDS	112..1167
Translation	MAASRSRRNNAGNKIAHLLNEEEEDDFYKTSYGGFQEDEEDKEYEQKDEEEDVVDSDFSIDENDEPVSDQEEAPEKKRKRGVVNTKAYKETKPAVKKETKATPALHKKRPGGGVTKRRPRPRFTVLDSGRKSIRTSTAIKTQATKIRLKELDDARKRKKKKVRVEDYMPTQEELLEEAKITEEENTKSLEKFQKMELEKKKSRPTKRTFSGPTIRYHSLTMPAMRKPTRGANPAVDSKDLAGKCERTFVTIENDFNDKVFQSLFRHKAPPKASNGICPITRLPARYFDPITQQPYYSIQAFKILREAYYMQLEQQGGGSEQPELAKWLEWRKLVKENRLKASAAASKNGDN

Target ORF information:

RefSeq Version	NM_135631.4
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster YL-1, transcript variant A (YL-1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_135631.4

ORF Insert Sequence:

ATGGCTGCCT CGCGATCACG GCGCAACAAT GCCGGCAACA AAATAGCTCA TTTGCTCAAT 
GAGGAAGAGG AGGACGACTT TTACAAAACG TCCTATGGTG GATTTCAGGA GGACGAAGAG 
GATAAGGAAT ACGAGCAAAA AGACGAAGAG GAAGATGTGG TTGACTCCGA CTTCAGTATC 
GATGAGAACG ACGAGCCCGT TTCGGATCAG GAAGAGGCGC CCGAGAAAAA GCGGAAACGC 
GGTGTCGTTA ACACAAAGGC TTATAAGGAA ACCAAGCCTG CAGTCAAAAA GGAAACAAAG 
GCAACGCCGG CCCTGCACAA GAAACGACCT GGTGGTGGGG TAACGAAACG GCGGCCACGT 
CCACGCTTCA CGGTCCTCGA TTCCGGCCGC AAATCCATAC GCACTTCCAC GGCCATCAAG 
ACACAGGCTA CCAAAATACG CCTCAAAGAG TTGGACGATG CCCGCAAGCG CAAAAAGAAG 
AAGGTGCGCG TGGAGGACTA CATGCCCACG CAGGAGGAGC TGCTGGAGGA GGCCAAAATA 
ACCGAGGAAG AAAACACTAA ATCTTTGGAG AAATTCCAGA AAATGGAGCT GGAGAAGAAG 
AAATCACGTC CCACCAAGCG CACGTTCTCC GGACCCACGA TACGCTACCA CTCACTAACC 
ATGCCAGCGA TGCGAAAGCC CACTCGCGGA GCAAACCCTG CGGTCGATTC AAAGGATCTT 
GCTGGGAAGT GCGAACGCAC ATTCGTTACA ATCGAGAACG ATTTCAATGA CAAGGTGTTT 
CAAAGCCTCT TCCGCCACAA GGCGCCTCCC AAAGCCAGCA ATGGCATCTG TCCAATCACC 
AGGCTGCCAG CCCGTTACTT TGACCCGATC ACACAGCAGC CATACTACAG CATCCAGGCC 
TTCAAAATTC TGCGCGAAGC CTACTACATG CAGCTGGAAC AGCAAGGCGG CGGCAGCGAG 
CAACCCGAAC TGGCCAAATG GCTGGAATGG CGCAAGCTGG TCAAGGAGAA TCGTCTGAAG 
GCTTCGGCAG CTGCCAGCAA AAACGGAGAT AACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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YL-1 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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