Etl1 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	Etl1
Entrez Gene ID	34311
Full Name	CG5899 gene product from transcript CG5899-RA
Synonyms	CG5899,Dmel\CG5899,ETL1,SMARCAD1
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2L Map Location: 30E1-30E4

mRNA and Protein(s)

mRNA	Protein	Name
NM_135476.4	NP_609320.2	Etl1

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	SMARCAD1	XP_001163670.1
Mus musculus (house mouse)	Smarcad1	NP_031984.1
Rattus norvegicus (Norway rat)	Smarcad1	NP_001101334.2
	SMARCAD1	XP_002804185.1
Gallus gallus (chicken)	SMARCAD1	XP_420485.4
Danio rerio (zebrafish)	smarcad1	NP_001018610.2
Danio rerio (zebrafish)	LOC563175	XP_005155692.1
Canis lupus familiaris (dog)	SMARCAD1	XP_005639255.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP009980	XP_319118.4
Xenopus tropicalis (tropical clawed frog)	smarcad1	NP_001015697.1
Homo sapiens (human)	SMARCAD1	NP_001121901.1
Bos taurus (cattle)	SMARCAD1	NP_001192361.1
Drosophila melanogaster (fruit fly)	Etl1	NP_609320.2

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Drosophila genetic experiments demonstrated interaction between SMARCAD1/Etl1 and CBP/nej during development. The interplay between the remodeling activity of SMARCAD1 and histone acetylation by CBP sheds light on the function of chromatin and the genome-integrity network.
Title: SMARCAD1 is an ATP-dependent stimulator of nucleosomal H2A acetylation via CBP, resulting in transcriptional regulation.

The following Etl1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Etl1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa14242	NM_135476.4 Latest version!	Drosophila melanogaster Etl1 (Etl1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$510.30 $729.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Etl1 ( NM_135476.4 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_609320.2 Drosophila melanogaster Etl1 (Etl1), mRNA.

Price & Availability↑

CloneID	OFa14242
Clone ID Related Accession (Same CDS sequence)	NM_135476.4
Accession Version	NM_135476.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2535bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	Etl1
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jan 16, 2013 this sequence version replaced NM_135476.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGTCGGACA GCACAGTGGC CGCATCTGCG TCGGCCTCCG CCTCATCGTC CGCGAAGTCG 
AGCCTCAGCG ATCTGCGTCA GTTCCGCATC AACAAGAATG CTTCCTCTGT CGTCGCTAGT 
CCTTCGAGAA CTGAGCGTGT GCCTGGAAAG AAGCGCATCC AGGTGATGGC CGATAGTGAC 
AGCGATGGCA ACGACTCCCA GACGCCCAAG AAGACCAAAC TGGAGCTGAC CGTTAAGGAA 
AAGGAGGAGC GCTACATGGC AGCCGCCAAG ATTTCGCCCC ACTTTGACAC AATGGCCATC 
CAGGAGTCTC TTTCCCGCAC CAATTGGGAT GTGGCCGCTT CCGTGCGATA CCTAAGGGAG 
AACTGCAAGC CCAAGGGGCA CAATGGACCA CTGGCCAAGT CCAAGCTGAA ACCCAGGTCA 
AACGGAATTA GTGGAGGCAA CTTCTCGGAT AACGACCATT CGGACGACGA TGATGTGAAG 
CAGTCCAAGG ACCAGGTGTA TGATAGCGAT GACAGCGATA GCGAGATGTC CACCAAGATG 
ACGGGGCAAC GTAAAAAAGT TTTCCAGTTT ATGAACGAGG CTTCGCTAAT TGAACTCCAG 
TCAGTTAAAA CGCTGTCCGA GAAGAAGGCA TTAGCCATCA TTGATGTGCG ACCATTTAGT 
GATTGGTCTG ATTTGCGCCA AAAGCTGGAG AGCATCAGGA TGTCGGGTGA TCTTTTGAAT 
TACGCTCAAG AGCTGATTAA CAAACAGAAC ACGGTGGCCG CTATTCTAAG TAAGTGCAAT 
AACATGGTGT CGCGTCTGGA GAAGGCGATT TCCAATGGTG CTGGCATTGT GGAGCAACCT 
AAGCTTCTTA GCAGCGGTCT ACAGCTGGCT GATTATCAGA TAATTGGCCT TAATTGGCTC 
ACCGTAATGC ACAAACAAGA AATGAATGGC ATTTTGGCAG ATGAAATGGG TCTGGGCAAG 
ACAATTCAGG TTATTGCATT TCTGGCCTAT CTAAAGGAGA ATGGTCTTAG CCAGGCTGCA 
CATTTAATTG TGGTGCCCTC GTCCACGCTG GATAATTGGG AGGCAGAGAT TAGCCGCTGG 
TGTCCCGAAC TGGTGGTGGA GAAGTACCAT GGCTCGCAGG ACGAGCGAAG GAGAATGCGA 
GGCCGCTTTG CCAAGGATGG ATTTACCGGC TTTGATGTTC TTCTGACCAC ATATCACATT 
GTGGGATCCA CGCCGGAGGA GAGGAAAATG TTCCGGGTTT GCAAGTTGGA CTACGTCATT 
TTTGATGAAG CCCATATGCT GAAGAACATG ACCACGCAAC GCTATGCTAA CCTTATAACC 
ATAAACGCTA GGATGCGAAT CCTGCTCACT GGAACTCCGC TGCAGAACAA TCTGCTGGAG 
CTAATCTCTC TGCTCTGCTT CGTGATGCCC AAATTCTTTG CCAAGAGCAT TGAGGACATA 
AAATCGTTGT TTGCTAAGAA GGGAAAAAGC GATGGAGATC AGGATGAGGT TTCACAGTTC 
CAGGAAACAC AAATCCAGAG AGCAAAGCGT ATCATGAAGC CATTTGTACT CAGACGGCTT 
AAGAAAGATG TCCTTAAGAA CCTGCCCAAG AAGCTAAGCC TGGTGGAAAA AGTGCCCATG 
AGCAGTCAAC AGAAAATATA CTATCACGAG CTGGTCGATT ATTATTCCAA TAACAAGGGC 
GAGGTGTGCA GCAGCAGCGA AAGGGCCGGC ATAGCGATCA TGATGGAGAT GCGCCGCATT 
GCAAACCATC CGTTGCTGAT GCGTCACTAC TTCACCGACG CCAATCTACG TGGATTCTCT 
AAGCGCCTGG CTAATGCCAG TTCCTTTAAA AAGACCAACG AGCAATACAT CTTTGAAGAG 
CTAGCCGTTA TGTCAGACTT TCAGGTCTAT CAGATGATGA ACAAGCATGA GTTTTACGAC 
GTGAAAATAC CCGATAATTT GATATGCGAT TCTGGAAAAT TCCTCTACCT GGATACGTTG 
CTTCCAAAAC TGAAGGCAGA AGGACACCGT GTGTTGCTTT TCAGCCAGTT CACCATGATG 
CTGGACATTG TGGAGGAGTA TCTGCGAATA CGAAAGTTTG GTTTCTGTCG CCTGGACGGG 
GCGACCGCCG TAAATGTCCG CCAGGATTTG ATCACCGACT TCAATGGGGA CGATAGCATC 
TTTGTGTTCC TACTCTCCAC CAAAGCCGGT GGCGTTGGCA TCAACCTGAC GGCTGCCGAC 
ACCTGTGTCA TTCACGATAT CGACTTCAAC CCGTACAACG ATAAACAGGC CGAGGATCGG 
TGTCATCGCA TGGGACAGCA GCGTCCGGTG ACCATTTACC GTCTCATTTC CGAGAGTACC 
ATCGAGGAGG GCATCCTGAT GGCCGCCGAA GAGAAGCTAA AACTAGAAAA GGACATTACT 
TCCAACGAGA AGGGCGAGGT GCACGAGCAG CGATGTGTGG TCAAGCTGTT GACCACAGCC 
CTTGGCTTGG ACAAGGATCA GGAGGAGCAG CTAAACAATT CACTAAACAA CTCCATAGCC 
TCGCCCGCCA AATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_609320.2
CDS	133..2667
Translation	MSDSTVAASASASASSSAKSSLSDLRQFRINKNASSVVASPSRTERVPGKKRIQVMADSDSDGNDSQTPKKTKLELTVKEKEERYMAAAKISPHFDTMAIQESLSRTNWDVAASVRYLRENCKPKGHNGPLAKSKLKPRSNGISGGNFSDNDHSDDDDVKQSKDQVYDSDDSDSEMSTKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIRMSGDLLNYAQELINKQNTVAAILSKCNNMVSRLEKAISNGAGIVEQPKLLSSGLQLADYQIIGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLAYLKENGLSQAAHLIVVPSSTLDNWEAEISRWCPELVVEKYHGSQDERRRMRGRFAKDGFTGFDVLLTTYHIVGSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITINARMRILLTGTPLQNNLLELISLLCFVMPKFFAKSIEDIKSLFAKKGKSDGDQDEVSQFQETQIQRAKRIMKPFVLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHELVDYYSNNKGEVCSSSERAGIAIMMEMRRIANHPLLMRHYFTDANLRGFSKRLANASSFKKTNEQYIFEELAVMSDFQVYQMMNKHEFYDVKIPDNLICDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATAVNVRQDLITDFNGDDSIFVFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQAEDRCHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITSNEKGEVHEQRCVVKLLTTALGLDKDQEEQLNNSLNNSIASPAK

Target ORF information:

RefSeq Version	NM_135476.4
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster Etl1 (Etl1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_135476.4

ORF Insert Sequence:

ATGTCGGACA GCACAGTGGC CGCATCTGCG TCGGCCTCCG CCTCATCGTC CGCGAAGTCG 
AGCCTCAGCG ATCTGCGTCA GTTCCGCATC AACAAGAATG CTTCCTCTGT CGTCGCTAGT 
CCTTCGAGAA CTGAGCGTGT GCCTGGAAAG AAGCGCATCC AGGTGATGGC CGATAGTGAC 
AGCGATGGCA ACGACTCCCA GACGCCCAAG AAGACCAAAC TGGAGCTGAC CGTTAAGGAA 
AAGGAGGAGC GCTACATGGC AGCCGCCAAG ATTTCGCCCC ACTTTGACAC AATGGCCATC 
CAGGAGTCTC TTTCCCGCAC CAATTGGGAT GTGGCCGCTT CCGTGCGATA CCTAAGGGAG 
AACTGCAAGC CCAAGGGGCA CAATGGACCA CTGGCCAAGT CCAAGCTGAA ACCCAGGTCA 
AACGGAATTA GTGGAGGCAA CTTCTCGGAT AACGACCATT CGGACGACGA TGATGTGAAG 
CAGTCCAAGG ACCAGGTGTA TGATAGCGAT GACAGCGATA GCGAGATGTC CACCAAGATG 
ACGGGGCAAC GTAAAAAAGT TTTCCAGTTT ATGAACGAGG CTTCGCTAAT TGAACTCCAG 
TCAGTTAAAA CGCTGTCCGA GAAGAAGGCA TTAGCCATCA TTGATGTGCG ACCATTTAGT 
GATTGGTCTG ATTTGCGCCA AAAGCTGGAG AGCATCAGGA TGTCGGGTGA TCTTTTGAAT 
TACGCTCAAG AGCTGATTAA CAAACAGAAC ACGGTGGCCG CTATTCTAAG TAAGTGCAAT 
AACATGGTGT CGCGTCTGGA GAAGGCGATT TCCAATGGTG CTGGCATTGT GGAGCAACCT 
AAGCTTCTTA GCAGCGGTCT ACAGCTGGCT GATTATCAGA TAATTGGCCT TAATTGGCTC 
ACCGTAATGC ACAAACAAGA AATGAATGGC ATTTTGGCAG ATGAAATGGG TCTGGGCAAG 
ACAATTCAGG TTATTGCATT TCTGGCCTAT CTAAAGGAGA ATGGTCTTAG CCAGGCTGCA 
CATTTAATTG TGGTGCCCTC GTCCACGCTG GATAATTGGG AGGCAGAGAT TAGCCGCTGG 
TGTCCCGAAC TGGTGGTGGA GAAGTACCAT GGCTCGCAGG ACGAGCGAAG GAGAATGCGA 
GGCCGCTTTG CCAAGGATGG ATTTACCGGC TTTGATGTTC TTCTGACCAC ATATCACATT 
GTGGGATCCA CGCCGGAGGA GAGGAAAATG TTCCGGGTTT GCAAGTTGGA CTACGTCATT 
TTTGATGAAG CCCATATGCT GAAGAACATG ACCACGCAAC GCTATGCTAA CCTTATAACC 
ATAAACGCTA GGATGCGAAT CCTGCTCACT GGAACTCCGC TGCAGAACAA TCTGCTGGAG 
CTAATCTCTC TGCTCTGCTT CGTGATGCCC AAATTCTTTG CCAAGAGCAT TGAGGACATA 
AAATCGTTGT TTGCTAAGAA GGGAAAAAGC GATGGAGATC AGGATGAGGT TTCACAGTTC 
CAGGAAACAC AAATCCAGAG AGCAAAGCGT ATCATGAAGC CATTTGTACT CAGACGGCTT 
AAGAAAGATG TCCTTAAGAA CCTGCCCAAG AAGCTAAGCC TGGTGGAAAA AGTGCCCATG 
AGCAGTCAAC AGAAAATATA CTATCACGAG CTGGTCGATT ATTATTCCAA TAACAAGGGC 
GAGGTGTGCA GCAGCAGCGA AAGGGCCGGC ATAGCGATCA TGATGGAGAT GCGCCGCATT 
GCAAACCATC CGTTGCTGAT GCGTCACTAC TTCACCGACG CCAATCTACG TGGATTCTCT 
AAGCGCCTGG CTAATGCCAG TTCCTTTAAA AAGACCAACG AGCAATACAT CTTTGAAGAG 
CTAGCCGTTA TGTCAGACTT TCAGGTCTAT CAGATGATGA ACAAGCATGA GTTTTACGAC 
GTGAAAATAC CCGATAATTT GATATGCGAT TCTGGAAAAT TCCTCTACCT GGATACGTTG 
CTTCCAAAAC TGAAGGCAGA AGGACACCGT GTGTTGCTTT TCAGCCAGTT CACCATGATG 
CTGGACATTG TGGAGGAGTA TCTGCGAATA CGAAAGTTTG GTTTCTGTCG CCTGGACGGG 
GCGACCGCCG TAAATGTCCG CCAGGATTTG ATCACCGACT TCAATGGGGA CGATAGCATC 
TTTGTGTTCC TACTCTCCAC CAAAGCCGGT GGCGTTGGCA TCAACCTGAC GGCTGCCGAC 
ACCTGTGTCA TTCACGATAT CGACTTCAAC CCGTACAACG ATAAACAGGC CGAGGATCGG 
TGTCATCGCA TGGGACAGCA GCGTCCGGTG ACCATTTACC GTCTCATTTC CGAGAGTACC 
ATCGAGGAGG GCATCCTGAT GGCCGCCGAA GAGAAGCTAA AACTAGAAAA GGACATTACT 
TCCAACGAGA AGGGCGAGGT GCACGAGCAG CGATGTGTGG TCAAGCTGTT GACCACAGCC 
CTTGGCTTGG ACAAGGATCA GGAGGAGCAG CTAAACAATT CACTAAACAA CTCCATAGCC 
TCGCCCGCCA AATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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Etl1 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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