CG5171 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG5171
Entrez Gene ID	34016
Full Name	CG5171 gene product from transcript CG5171-RD
Synonyms	Dmel\CG5171
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2L Map Location: 27F3-27F3

mRNA and Protein(s)

mRNA	Protein	Name
NM_135269.3	NP_609113.1	uncharacterized protein, isoform A
NM_001144334.4	NP_001137806.1	uncharacterized protein, isoform E
NM_001298780.2	NP_001285709.1	uncharacterized protein, isoform F
NM_001201780.1	NP_001188709.1	uncharacterized protein, isoform D
NM_164748.3	NP_723273.1	uncharacterized protein, isoform B

Pathways from BioSystems

Homologies

Drosophila melanogaster (fruit fly)	CG5171	NP_001188709.1
Arabidopsis thaliana (thale cress)	AT4G12430	NP_192980.1
Arabidopsis thaliana (thale cress)	AT4G22590	NP_193990.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP008225	XP_317247.4
Oryza sativa (rice)	Os02g0661100	NP_001047645.1
Arabidopsis thaliana (thale cress)	ATTPPA	NP_974922.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG5171 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG5171 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OFa14025	NM_164748.3 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant B (CG5171), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OFa14025	NM_135269.3 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant A (CG5171), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OFa14025	NM_001298780.2 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant F (CG5171), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OFa14025	NM_001144334.4 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant E (CG5171), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OFa16361	NM_001201780.1 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant D (CG5171), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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2-4 Clone	40% OFF
5 or more Clone	50% OFF
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG5171 ( NM_135269.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_609113.1 Drosophila melanogaster uncharacterized protein, transcript variant A (CG5171), mRNA.

Price & Availability↑

CloneID	OFa14025
Clone ID Related Accession (Same CDS sequence)	NM_135269.3 , NM_001144334.4 , NM_001298780.2 , NM_164748.3
Accession Version	NM_135269.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 822bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Oct 19, 2015 this sequence version replaced NM_135269.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCCTGAGA AACAAGTGGC ACCTGTAATT AGTAATCTCG AGGATTTTGC GAATAATTTA 
CCTGGGTATC TAATTTCTGA AAGTCCAGTT GCCGTACTCC TGGACTACGA TGGCACCCTA 
GCTCCCATTG CGGATAATCC AGCGAAGACC AAAATGCCCG TGGAACTGGA GGCCATACTG 
CACAAGATAG CCAAGCATCC CAAAGTTTTT CTCGCTGTGA TCTCGGGTCG CGGACTGAAA 
GATGTGCAAA AACAAGTAAA TATCGATGGC ATTACATATG CTGGTAATCA TGGACTGGAA 
ATCGAGTATC CCGATGGCTC CAGGCACGAT TACGAGCTAC CCACGGAGAT CCAGAAAAAC 
TACACACAAA TGGTTAGGGA GCTCAAGGAG AAGGTGGAGA AGAATGGAGC CTGGGTGGAG 
GATAAGAAGG TGTCACTCAC CTACCACTAC AGAGATACGC CCGCAGCCCT GAAGGATCAG 
CAAAAGCAGT TGGCTTCGGA GATCTGCACA AAGTTCGGAT TCCGTGCGAA TCAGGCCCAT 
GAAGCCATCG AAGCTAAGCC CCCAGTGAAT TGGAACAAGG GAGAGGCTGC CGTGTATATT 
CTGAAGCAGA AATTCGGGGA TAATTGGTCG CAGAAAGTGA GTGTGGTCTT TGCGGGCGAT 
GACACCACCG ATGAAGATGC CATGAGAGTG CTTCGAGGCT TGGGTCGCTC GTTTAGAATT 
TCTGCTGATG CCCAGATTCA AACTTATGCG GATTTCCGGT TGCCCAAGCA GGCTGTAATG 
ACCGATCTTC TCAAATGGAT AGCCAATGTG TATGTTTCTT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_609113.1
CDS	151..972
Translation	MPEKQVAPVISNLEDFANNLPGYLISESPVAVLLDYDGTLAPIADNPAKTKMPVELEAILHKIAKHPKVFLAVISGRGLKDVQKQVNIDGITYAGNHGLEIEYPDGSRHDYELPTEIQKNYTQMVRELKEKVEKNGAWVEDKKVSLTYHYRDTPAALKDQQKQLASEICTKFGFRANQAHEAIEAKPPVNWNKGEAAVYILKQKFGDNWSQKVSVVFAGDDTTDEDAMRVLRGLGRSFRISADAQIQTYADFRLPKQAVMTDLLKWIANVYVS

Target ORF information:

RefSeq Version	NM_135269.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant A (CG5171), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_135269.3

ORF Insert Sequence:

ATGCCTGAGA AACAAGTGGC ACCTGTAATT AGTAATCTCG AGGATTTTGC GAATAATTTA 
CCTGGGTATC TAATTTCTGA AAGTCCAGTT GCCGTACTCC TGGACTACGA TGGCACCCTA 
GCTCCCATTG CGGATAATCC AGCGAAGACC AAAATGCCCG TGGAACTGGA GGCCATACTG 
CACAAGATAG CCAAGCATCC CAAAGTTTTT CTCGCTGTGA TCTCGGGTCG CGGACTGAAA 
GATGTGCAAA AACAAGTAAA TATCGATGGC ATTACATATG CTGGTAATCA TGGACTGGAA 
ATCGAGTATC CCGATGGCTC CAGGCACGAT TACGAGCTAC CCACGGAGAT CCAGAAAAAC 
TACACACAAA TGGTTAGGGA GCTCAAGGAG AAGGTGGAGA AGAATGGAGC CTGGGTGGAG 
GATAAGAAGG TGTCACTCAC CTACCACTAC AGAGATACGC CCGCAGCCCT GAAGGATCAG 
CAAAAGCAGT TGGCTTCGGA GATCTGCACA AAGTTCGGAT TCCGTGCGAA TCAGGCCCAT 
GAAGCCATCG AAGCTAAGCC CCCAGTGAAT TGGAACAAGG GAGAGGCTGC CGTGTATATT 
CTGAAGCAGA AATTCGGGGA TAATTGGTCG CAGAAAGTGA GTGTGGTCTT TGCGGGCGAT 
GACACCACCG ATGAAGATGC CATGAGAGTG CTTCGAGGCT TGGGTCGCTC GTTTAGAATT 
TCTGCTGATG CCCAGATTCA AACTTATGCG GATTTCCGGT TGCCCAAGCA GGCTGTAATG 
ACCGATCTTC TCAAATGGAT AGCCAATGTG TATGTTTCTT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CG5171 ( NM_001144334.4 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001137806.1 Drosophila melanogaster uncharacterized protein, transcript variant E (CG5171), mRNA.

Price & Availability↑

CloneID	OFa14025
Clone ID Related Accession (Same CDS sequence)	NM_135269.3 , NM_001144334.4 , NM_001298780.2 , NM_164748.3
Accession Version	NM_001144334.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 822bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform E
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jul 15, 2014 this sequence version replaced NM_001144334.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCCTGAGA AACAAGTGGC ACCTGTAATT AGTAATCTCG AGGATTTTGC GAATAATTTA 
CCTGGGTATC TAATTTCTGA AAGTCCAGTT GCCGTACTCC TGGACTACGA TGGCACCCTA 
GCTCCCATTG CGGATAATCC AGCGAAGACC AAAATGCCCG TGGAACTGGA GGCCATACTG 
CACAAGATAG CCAAGCATCC CAAAGTTTTT CTCGCTGTGA TCTCGGGTCG CGGACTGAAA 
GATGTGCAAA AACAAGTAAA TATCGATGGC ATTACATATG CTGGTAATCA TGGACTGGAA 
ATCGAGTATC CCGATGGCTC CAGGCACGAT TACGAGCTAC CCACGGAGAT CCAGAAAAAC 
TACACACAAA TGGTTAGGGA GCTCAAGGAG AAGGTGGAGA AGAATGGAGC CTGGGTGGAG 
GATAAGAAGG TGTCACTCAC CTACCACTAC AGAGATACGC CCGCAGCCCT GAAGGATCAG 
CAAAAGCAGT TGGCTTCGGA GATCTGCACA AAGTTCGGAT TCCGTGCGAA TCAGGCCCAT 
GAAGCCATCG AAGCTAAGCC CCCAGTGAAT TGGAACAAGG GAGAGGCTGC CGTGTATATT 
CTGAAGCAGA AATTCGGGGA TAATTGGTCG CAGAAAGTGA GTGTGGTCTT TGCGGGCGAT 
GACACCACCG ATGAAGATGC CATGAGAGTG CTTCGAGGCT TGGGTCGCTC GTTTAGAATT 
TCTGCTGATG CCCAGATTCA AACTTATGCG GATTTCCGGT TGCCCAAGCA GGCTGTAATG 
ACCGATCTTC TCAAATGGAT AGCCAATGTG TATGTTTCTT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001137806.1
CDS	154..975
Translation	MPEKQVAPVISNLEDFANNLPGYLISESPVAVLLDYDGTLAPIADNPAKTKMPVELEAILHKIAKHPKVFLAVISGRGLKDVQKQVNIDGITYAGNHGLEIEYPDGSRHDYELPTEIQKNYTQMVRELKEKVEKNGAWVEDKKVSLTYHYRDTPAALKDQQKQLASEICTKFGFRANQAHEAIEAKPPVNWNKGEAAVYILKQKFGDNWSQKVSVVFAGDDTTDEDAMRVLRGLGRSFRISADAQIQTYADFRLPKQAVMTDLLKWIANVYVS

Target ORF information:

RefSeq Version	NM_001144334.4
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant E (CG5171), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001144334.4

ORF Insert Sequence:

ATGCCTGAGA AACAAGTGGC ACCTGTAATT AGTAATCTCG AGGATTTTGC GAATAATTTA 
CCTGGGTATC TAATTTCTGA AAGTCCAGTT GCCGTACTCC TGGACTACGA TGGCACCCTA 
GCTCCCATTG CGGATAATCC AGCGAAGACC AAAATGCCCG TGGAACTGGA GGCCATACTG 
CACAAGATAG CCAAGCATCC CAAAGTTTTT CTCGCTGTGA TCTCGGGTCG CGGACTGAAA 
GATGTGCAAA AACAAGTAAA TATCGATGGC ATTACATATG CTGGTAATCA TGGACTGGAA 
ATCGAGTATC CCGATGGCTC CAGGCACGAT TACGAGCTAC CCACGGAGAT CCAGAAAAAC 
TACACACAAA TGGTTAGGGA GCTCAAGGAG AAGGTGGAGA AGAATGGAGC CTGGGTGGAG 
GATAAGAAGG TGTCACTCAC CTACCACTAC AGAGATACGC CCGCAGCCCT GAAGGATCAG 
CAAAAGCAGT TGGCTTCGGA GATCTGCACA AAGTTCGGAT TCCGTGCGAA TCAGGCCCAT 
GAAGCCATCG AAGCTAAGCC CCCAGTGAAT TGGAACAAGG GAGAGGCTGC CGTGTATATT 
CTGAAGCAGA AATTCGGGGA TAATTGGTCG CAGAAAGTGA GTGTGGTCTT TGCGGGCGAT 
GACACCACCG ATGAAGATGC CATGAGAGTG CTTCGAGGCT TGGGTCGCTC GTTTAGAATT 
TCTGCTGATG CCCAGATTCA AACTTATGCG GATTTCCGGT TGCCCAAGCA GGCTGTAATG 
ACCGATCTTC TCAAATGGAT AGCCAATGTG TATGTTTCTT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CG5171 ( NM_001298780.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001285709.1 Drosophila melanogaster uncharacterized protein, transcript variant F (CG5171), mRNA.

Price & Availability↑

CloneID	OFa14025
Clone ID Related Accession (Same CDS sequence)	NM_135269.3 , NM_001144334.4 , NM_001298780.2 , NM_164748.3
Accession Version	NM_001298780.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 822bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform F
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Oct 19, 2015 this sequence version replaced NM_001298780.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCCTGAGA AACAAGTGGC ACCTGTAATT AGTAATCTCG AGGATTTTGC GAATAATTTA 
CCTGGGTATC TAATTTCTGA AAGTCCAGTT GCCGTACTCC TGGACTACGA TGGCACCCTA 
GCTCCCATTG CGGATAATCC AGCGAAGACC AAAATGCCCG TGGAACTGGA GGCCATACTG 
CACAAGATAG CCAAGCATCC CAAAGTTTTT CTCGCTGTGA TCTCGGGTCG CGGACTGAAA 
GATGTGCAAA AACAAGTAAA TATCGATGGC ATTACATATG CTGGTAATCA TGGACTGGAA 
ATCGAGTATC CCGATGGCTC CAGGCACGAT TACGAGCTAC CCACGGAGAT CCAGAAAAAC 
TACACACAAA TGGTTAGGGA GCTCAAGGAG AAGGTGGAGA AGAATGGAGC CTGGGTGGAG 
GATAAGAAGG TGTCACTCAC CTACCACTAC AGAGATACGC CCGCAGCCCT GAAGGATCAG 
CAAAAGCAGT TGGCTTCGGA GATCTGCACA AAGTTCGGAT TCCGTGCGAA TCAGGCCCAT 
GAAGCCATCG AAGCTAAGCC CCCAGTGAAT TGGAACAAGG GAGAGGCTGC CGTGTATATT 
CTGAAGCAGA AATTCGGGGA TAATTGGTCG CAGAAAGTGA GTGTGGTCTT TGCGGGCGAT 
GACACCACCG ATGAAGATGC CATGAGAGTG CTTCGAGGCT TGGGTCGCTC GTTTAGAATT 
TCTGCTGATG CCCAGATTCA AACTTATGCG GATTTCCGGT TGCCCAAGCA GGCTGTAATG 
ACCGATCTTC TCAAATGGAT AGCCAATGTG TATGTTTCTT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001285709.1
CDS	199..1020
Translation	MPEKQVAPVISNLEDFANNLPGYLISESPVAVLLDYDGTLAPIADNPAKTKMPVELEAILHKIAKHPKVFLAVISGRGLKDVQKQVNIDGITYAGNHGLEIEYPDGSRHDYELPTEIQKNYTQMVRELKEKVEKNGAWVEDKKVSLTYHYRDTPAALKDQQKQLASEICTKFGFRANQAHEAIEAKPPVNWNKGEAAVYILKQKFGDNWSQKVSVVFAGDDTTDEDAMRVLRGLGRSFRISADAQIQTYADFRLPKQAVMTDLLKWIANVYVS

Target ORF information:

RefSeq Version	NM_001298780.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant F (CG5171), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001298780.2

ORF Insert Sequence:

ATGCCTGAGA AACAAGTGGC ACCTGTAATT AGTAATCTCG AGGATTTTGC GAATAATTTA 
CCTGGGTATC TAATTTCTGA AAGTCCAGTT GCCGTACTCC TGGACTACGA TGGCACCCTA 
GCTCCCATTG CGGATAATCC AGCGAAGACC AAAATGCCCG TGGAACTGGA GGCCATACTG 
CACAAGATAG CCAAGCATCC CAAAGTTTTT CTCGCTGTGA TCTCGGGTCG CGGACTGAAA 
GATGTGCAAA AACAAGTAAA TATCGATGGC ATTACATATG CTGGTAATCA TGGACTGGAA 
ATCGAGTATC CCGATGGCTC CAGGCACGAT TACGAGCTAC CCACGGAGAT CCAGAAAAAC 
TACACACAAA TGGTTAGGGA GCTCAAGGAG AAGGTGGAGA AGAATGGAGC CTGGGTGGAG 
GATAAGAAGG TGTCACTCAC CTACCACTAC AGAGATACGC CCGCAGCCCT GAAGGATCAG 
CAAAAGCAGT TGGCTTCGGA GATCTGCACA AAGTTCGGAT TCCGTGCGAA TCAGGCCCAT 
GAAGCCATCG AAGCTAAGCC CCCAGTGAAT TGGAACAAGG GAGAGGCTGC CGTGTATATT 
CTGAAGCAGA AATTCGGGGA TAATTGGTCG CAGAAAGTGA GTGTGGTCTT TGCGGGCGAT 
GACACCACCG ATGAAGATGC CATGAGAGTG CTTCGAGGCT TGGGTCGCTC GTTTAGAATT 
TCTGCTGATG CCCAGATTCA AACTTATGCG GATTTCCGGT TGCCCAAGCA GGCTGTAATG 
ACCGATCTTC TCAAATGGAT AGCCAATGTG TATGTTTCTT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CG5171 ( NM_164748.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_723273.1 Drosophila melanogaster uncharacterized protein, transcript variant B (CG5171), mRNA.

Price & Availability↑

CloneID	OFa14025
Clone ID Related Accession (Same CDS sequence)	NM_135269.3 , NM_001144334.4 , NM_001298780.2 , NM_164748.3
Accession Version	NM_164748.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 822bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Oct 19, 2015 this sequence version replaced NM_164748.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCCTGAGA AACAAGTGGC ACCTGTAATT AGTAATCTCG AGGATTTTGC GAATAATTTA 
CCTGGGTATC TAATTTCTGA AAGTCCAGTT GCCGTACTCC TGGACTACGA TGGCACCCTA 
GCTCCCATTG CGGATAATCC AGCGAAGACC AAAATGCCCG TGGAACTGGA GGCCATACTG 
CACAAGATAG CCAAGCATCC CAAAGTTTTT CTCGCTGTGA TCTCGGGTCG CGGACTGAAA 
GATGTGCAAA AACAAGTAAA TATCGATGGC ATTACATATG CTGGTAATCA TGGACTGGAA 
ATCGAGTATC CCGATGGCTC CAGGCACGAT TACGAGCTAC CCACGGAGAT CCAGAAAAAC 
TACACACAAA TGGTTAGGGA GCTCAAGGAG AAGGTGGAGA AGAATGGAGC CTGGGTGGAG 
GATAAGAAGG TGTCACTCAC CTACCACTAC AGAGATACGC CCGCAGCCCT GAAGGATCAG 
CAAAAGCAGT TGGCTTCGGA GATCTGCACA AAGTTCGGAT TCCGTGCGAA TCAGGCCCAT 
GAAGCCATCG AAGCTAAGCC CCCAGTGAAT TGGAACAAGG GAGAGGCTGC CGTGTATATT 
CTGAAGCAGA AATTCGGGGA TAATTGGTCG CAGAAAGTGA GTGTGGTCTT TGCGGGCGAT 
GACACCACCG ATGAAGATGC CATGAGAGTG CTTCGAGGCT TGGGTCGCTC GTTTAGAATT 
TCTGCTGATG CCCAGATTCA AACTTATGCG GATTTCCGGT TGCCCAAGCA GGCTGTAATG 
ACCGATCTTC TCAAATGGAT AGCCAATGTG TATGTTTCTT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_723273.1
CDS	394..1215
Translation	MPEKQVAPVISNLEDFANNLPGYLISESPVAVLLDYDGTLAPIADNPAKTKMPVELEAILHKIAKHPKVFLAVISGRGLKDVQKQVNIDGITYAGNHGLEIEYPDGSRHDYELPTEIQKNYTQMVRELKEKVEKNGAWVEDKKVSLTYHYRDTPAALKDQQKQLASEICTKFGFRANQAHEAIEAKPPVNWNKGEAAVYILKQKFGDNWSQKVSVVFAGDDTTDEDAMRVLRGLGRSFRISADAQIQTYADFRLPKQAVMTDLLKWIANVYVS

Target ORF information:

RefSeq Version	NM_164748.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant B (CG5171), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_164748.3

ORF Insert Sequence:

ATGCCTGAGA AACAAGTGGC ACCTGTAATT AGTAATCTCG AGGATTTTGC GAATAATTTA 
CCTGGGTATC TAATTTCTGA AAGTCCAGTT GCCGTACTCC TGGACTACGA TGGCACCCTA 
GCTCCCATTG CGGATAATCC AGCGAAGACC AAAATGCCCG TGGAACTGGA GGCCATACTG 
CACAAGATAG CCAAGCATCC CAAAGTTTTT CTCGCTGTGA TCTCGGGTCG CGGACTGAAA 
GATGTGCAAA AACAAGTAAA TATCGATGGC ATTACATATG CTGGTAATCA TGGACTGGAA 
ATCGAGTATC CCGATGGCTC CAGGCACGAT TACGAGCTAC CCACGGAGAT CCAGAAAAAC 
TACACACAAA TGGTTAGGGA GCTCAAGGAG AAGGTGGAGA AGAATGGAGC CTGGGTGGAG 
GATAAGAAGG TGTCACTCAC CTACCACTAC AGAGATACGC CCGCAGCCCT GAAGGATCAG 
CAAAAGCAGT TGGCTTCGGA GATCTGCACA AAGTTCGGAT TCCGTGCGAA TCAGGCCCAT 
GAAGCCATCG AAGCTAAGCC CCCAGTGAAT TGGAACAAGG GAGAGGCTGC CGTGTATATT 
CTGAAGCAGA AATTCGGGGA TAATTGGTCG CAGAAAGTGA GTGTGGTCTT TGCGGGCGAT 
GACACCACCG ATGAAGATGC CATGAGAGTG CTTCGAGGCT TGGGTCGCTC GTTTAGAATT 
TCTGCTGATG CCCAGATTCA AACTTATGCG GATTTCCGGT TGCCCAAGCA GGCTGTAATG 
ACCGATCTTC TCAAATGGAT AGCCAATGTG TATGTTTCTT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CG5171 ( NM_001201780.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001188709.1 Drosophila melanogaster uncharacterized protein, transcript variant D (CG5171), mRNA.

Price & Availability↑

CloneID	OFa16361
Clone ID Related Accession (Same CDS sequence)	NM_001201780.1
Accession Version	NM_001201780.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 891bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform D
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAAATCTA TCGTATTTTT ATTGGCATTA CTTCTAAACG CGACAAGGAG TTATCGGGAA 
ATTGTGAAAA TGCCTGAGAA ACAAGTGGCA CCTGTAATTA GTAATCTCGA GGATTTTGCG 
AATAATTTAC CTGGGTATCT AATTTCTGAA AGTCCAGTTG CCGTACTCCT GGACTACGAT 
GGCACCCTAG CTCCCATTGC GGATAATCCA GCGAAGACCA AAATGCCCGT GGAACTGGAG 
GCCATACTGC ACAAGATAGC CAAGCATCCC AAAGTTTTTC TCGCTGTGAT CTCGGGTCGC 
GGACTGAAAG ATGTGCAAAA ACAAGTAAAT ATCGATGGCA TTACATATGC TGGTAATCAT 
GGACTGGAAA TCGAGTATCC CGATGGCTCC AGGCACGATT ACGAGCTACC CACGGAGATC 
CAGAAAAACT ACACACAAAT GGTTAGGGAG CTCAAGGAGA AGGTGGAGAA GAATGGAGCC 
TGGGTGGAGG ATAAGAAGGT GTCACTCACC TACCACTACA GAGATACGCC CGCAGCCCTG 
AAGGATCAGC AAAAGCAGTT GGCTTCGGAG ATCTGCACAA AGTTCGGATT CCGTGCGAAT 
CAGGCCCATG AAGCCATCGA AGCTAAGCCC CCAGTGAATT GGAACAAGGG AGAGGCTGCC 
GTGTATATTC TGAAGCAGAA ATTCGGGGAT AATTGGTCGC AGAAAGTGAG TGTGGTCTTT 
GCGGGCGATG ACACCACCGA TGAAGATGCC ATGAGAGTGC TTCGAGGCTT GGGTCGCTCG 
TTTAGAATTT CTGCTGATGC CCAGATTCAA ACTTATGCGG ATTTCCGGTT GCCCAAGCAG 
GCTGTAATGA CCGATCTTCT CAAATGGATA GCCAATGTGT ATGTTTCTTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001188709.1
CDS	104..994
Translation	MKSIVFLLALLLNATRSYREIVKMPEKQVAPVISNLEDFANNLPGYLISESPVAVLLDYDGTLAPIADNPAKTKMPVELEAILHKIAKHPKVFLAVISGRGLKDVQKQVNIDGITYAGNHGLEIEYPDGSRHDYELPTEIQKNYTQMVRELKEKVEKNGAWVEDKKVSLTYHYRDTPAALKDQQKQLASEICTKFGFRANQAHEAIEAKPPVNWNKGEAAVYILKQKFGDNWSQKVSVVFAGDDTTDEDAMRVLRGLGRSFRISADAQIQTYADFRLPKQAVMTDLLKWIANVYVS

Target ORF information:

RefSeq Version	NM_001201780.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant D (CG5171), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001201780.1

ORF Insert Sequence:

ATGAAATCTA TCGTATTTTT ATTGGCATTA CTTCTAAACG CGACAAGGAG TTATCGGGAA 
ATTGTGAAAA TGCCTGAGAA ACAAGTGGCA CCTGTAATTA GTAATCTCGA GGATTTTGCG 
AATAATTTAC CTGGGTATCT AATTTCTGAA AGTCCAGTTG CCGTACTCCT GGACTACGAT 
GGCACCCTAG CTCCCATTGC GGATAATCCA GCGAAGACCA AAATGCCCGT GGAACTGGAG 
GCCATACTGC ACAAGATAGC CAAGCATCCC AAAGTTTTTC TCGCTGTGAT CTCGGGTCGC 
GGACTGAAAG ATGTGCAAAA ACAAGTAAAT ATCGATGGCA TTACATATGC TGGTAATCAT 
GGACTGGAAA TCGAGTATCC CGATGGCTCC AGGCACGATT ACGAGCTACC CACGGAGATC 
CAGAAAAACT ACACACAAAT GGTTAGGGAG CTCAAGGAGA AGGTGGAGAA GAATGGAGCC 
TGGGTGGAGG ATAAGAAGGT GTCACTCACC TACCACTACA GAGATACGCC CGCAGCCCTG 
AAGGATCAGC AAAAGCAGTT GGCTTCGGAG ATCTGCACAA AGTTCGGATT CCGTGCGAAT 
CAGGCCCATG AAGCCATCGA AGCTAAGCCC CCAGTGAATT GGAACAAGGG AGAGGCTGCC 
GTGTATATTC TGAAGCAGAA ATTCGGGGAT AATTGGTCGC AGAAAGTGAG TGTGGTCTTT 
GCGGGCGATG ACACCACCGA TGAAGATGCC ATGAGAGTGC TTCGAGGCTT GGGTCGCTCG 
TTTAGAATTT CTGCTGATGC CCAGATTCAA ACTTATGCGG ATTTCCGGTT GCCCAAGCAG 
GCTGTAATGA CCGATCTTCT CAAATGGATA GCCAATGTGT ATGTTTCTTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG5171 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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