CG5828 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG5828
Entrez Gene ID	33742
Full Name	CG5828 gene product from transcript CG5828-RB
Synonyms	Dmel\CG5828
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2L Map Location: 25C6-25C6

mRNA and Protein(s)

mRNA	Protein	Name
NM_001273156.2	NP_001260085.1	uncharacterized protein, isoform B
NM_135063.2	NP_608907.1	uncharacterized protein, isoform A

Pathways from BioSystems

Homologies

Homo sapiens (human)	PANK4	NP_060686.1
Rattus norvegicus (Norway rat)	Pank4	NP_598215.1
Caenorhabditis elegans (roundworm)	pnk-4	NP_508866.1
Eremothecium gossypii	AGOS_AFR729C	NP_986277.2
Oryza sativa (rice)	Os09g0533100	NP_001063766.1
Canis lupus familiaris (dog)	PANK4	XP_536718.2
Bos taurus (cattle)	PANK4	NP_001076898.1
Gallus gallus (chicken)	PANK4	NP_001231841.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP010073	XP_319230.4
Kluyveromyces lactis	KLLA0C00869g	XP_452233.1
Neurospora crassa	NCU03154	XP_964560.1
Xenopus tropicalis (tropical clawed frog)	pank4	NP_001120490.2
Pan troglodytes (chimpanzee)	PANK4	XP_524846.3
Mus musculus (house mouse)	Pank4	NP_766578.2
Saccharomyces cerevisiae (baker's yeast)	CAB1	NP_010820.3
	PANK4	XP_001086116.2
Danio rerio (zebrafish)	pank4	NP_956809.1
Drosophila melanogaster (fruit fly)	CG5828	NP_001260085.1
Schizosaccharomyces pombe (fission yeast)	SPBC4B4.01c	NP_596418.1
Magnaporthe oryzae (rice blast fungus)	MGG_17976	XP_003721002.1
Arabidopsis thaliana (thale cress)	PANK2	NP_194945.3

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG5828 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG5828 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa13789	NM_135063.2 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant A (CG5828), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
OFa13789	NM_001273156.2 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant B (CG5828), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG5828 ( NM_001273156.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001260085.1 Drosophila melanogaster uncharacterized protein, transcript variant B (CG5828), mRNA.

Price & Availability↑

CloneID	OFa13789
Clone ID Related Accession (Same CDS sequence)	NM_001273156.2 , NM_135063.2
Accession Version	NM_001273156.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1086bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jul 15, 2014 this sequence version replaced NM_001273156.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGTACAGTA GCAGCTTGCT GCCGGATCCG GCTGTCTATC AGCCGGACAC CCTGGACCTG 
AACACGGATG GAAAGGCGGC GGATTACTGG TTCAACTGCT TCCGCGACAT GGTGGCCAAG 
TTCGCGAAGG TGGCGGCCAA GTCACAGGAG GAGGATCACA CGGCCACCCA GCGGGCGGAG 
CAGTTCCAGG CGGCGTATCT GCAGCGGCTG GAGGAGCACC AGCGTAATGT GCCAGTCAAC 
AAGGGCAAGG TGATTCTAGG CACCAGTGAG CTTCTCAAGC TAAACGAAAC CCTGTTGCGC 
CGCTACGGAT TTACAGATCC CTGGCTGAGA CAAAAGAGGC TGGAAAATGC ATCGGCTGTT 
GCCCGCCTGA AGCAGCGTCT GCAGGAATTG GATGCCCTGG CGGATGAGGA CACAAGGTGG 
ACGGAGCTGG TACGCGGTGT CCTCGCCGGC AACATGTTTG ACTGGGGCGC ACAGGCCATA 
TCTAACATAC TGGAGCAGGA CAGCAATTTC GGACTTCATT CAGCCCTGGA TCGCATTGAG 
AAGCGACCCT GGTTGCTTGA CAACCTGGAC AGCTGGTTGA ATCGCCTCAA GGGCGAGCCA 
CACAAGTGCG CCGTGGTCTT TGTGGACAAC AGCGGCGTGG ATGTGGTTCT GGGTGTGCTT 
CCCTTTGTCC GTGGACTGCT GAAACGTGGC ACCAAGGTGC TGCTCTGCGC CAACAGTGAA 
CCTGCTCTAA ATGATGTGAC CAGCGAGGAG CTGAAATCCT TGCTGGACGA CTGCTCGCGC 
GAGTGTGAGG TCCTGGAGCA GGCCTGGTCA AAGGGACAAC TACTGGTCTA TGCAAATGGA 
CAGACTGGTC CCTGCCTGGA TATGCGCACT CTCCCCAAGG AGCTGTGCGA CGCCATCGCC 
GCCAATGAGA CTGACCTGCT TGTGATTGAG GGCATGGGAC GCGCCCTGCA CACAAATCTG 
AATGCCCGCT TCGGCTGCGA GACCCTCAAG TTGGCCGTGA TAAAAAACAA ATGGCTGGCC 
AAGTACCTGG GCGGCGAGGA TATGTTCGCC GTCGTCTGCA AGTTCGAACC GGCTGCGCCC 
AGCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001260085.1
CDS	131..1216
Translation	MYSSSLLPDPAVYQPDTLDLNTDGKAADYWFNCFRDMVAKFAKVAAKSQEEDHTATQRAEQFQAAYLQRLEEHQRNVPVNKGKVILGTSELLKLNETLLRRYGFTDPWLRQKRLENASAVARLKQRLQELDALADEDTRWTELVRGVLAGNMFDWGAQAISNILEQDSNFGLHSALDRIEKRPWLLDNLDSWLNRLKGEPHKCAVVFVDNSGVDVVLGVLPFVRGLLKRGTKVLLCANSEPALNDVTSEELKSLLDDCSRECEVLEQAWSKGQLLVYANGQTGPCLDMRTLPKELCDAIAANETDLLVIEGMGRALHTNLNARFGCETLKLAVIKNKWLAKYLGGEDMFAVVCKFEPAAPS

Target ORF information:

RefSeq Version	NM_001273156.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant B (CG5828), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001273156.2

ORF Insert Sequence:

ATGTACAGTA GCAGCTTGCT GCCGGATCCG GCTGTCTATC AGCCGGACAC CCTGGACCTG 
AACACGGATG GAAAGGCGGC GGATTACTGG TTCAACTGCT TCCGCGACAT GGTGGCCAAG 
TTCGCGAAGG TGGCGGCCAA GTCACAGGAG GAGGATCACA CGGCCACCCA GCGGGCGGAG 
CAGTTCCAGG CGGCGTATCT GCAGCGGCTG GAGGAGCACC AGCGTAATGT GCCAGTCAAC 
AAGGGCAAGG TGATTCTAGG CACCAGTGAG CTTCTCAAGC TAAACGAAAC CCTGTTGCGC 
CGCTACGGAT TTACAGATCC CTGGCTGAGA CAAAAGAGGC TGGAAAATGC ATCGGCTGTT 
GCCCGCCTGA AGCAGCGTCT GCAGGAATTG GATGCCCTGG CGGATGAGGA CACAAGGTGG 
ACGGAGCTGG TACGCGGTGT CCTCGCCGGC AACATGTTTG ACTGGGGCGC ACAGGCCATA 
TCTAACATAC TGGAGCAGGA CAGCAATTTC GGACTTCATT CAGCCCTGGA TCGCATTGAG 
AAGCGACCCT GGTTGCTTGA CAACCTGGAC AGCTGGTTGA ATCGCCTCAA GGGCGAGCCA 
CACAAGTGCG CCGTGGTCTT TGTGGACAAC AGCGGCGTGG ATGTGGTTCT GGGTGTGCTT 
CCCTTTGTCC GTGGACTGCT GAAACGTGGC ACCAAGGTGC TGCTCTGCGC CAACAGTGAA 
CCTGCTCTAA ATGATGTGAC CAGCGAGGAG CTGAAATCCT TGCTGGACGA CTGCTCGCGC 
GAGTGTGAGG TCCTGGAGCA GGCCTGGTCA AAGGGACAAC TACTGGTCTA TGCAAATGGA 
CAGACTGGTC CCTGCCTGGA TATGCGCACT CTCCCCAAGG AGCTGTGCGA CGCCATCGCC 
GCCAATGAGA CTGACCTGCT TGTGATTGAG GGCATGGGAC GCGCCCTGCA CACAAATCTG 
AATGCCCGCT TCGGCTGCGA GACCCTCAAG TTGGCCGTGA TAAAAAACAA ATGGCTGGCC 
AAGTACCTGG GCGGCGAGGA TATGTTCGCC GTCGTCTGCA AGTTCGAACC GGCTGCGCCC 
AGCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CG5828 ( NM_135063.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_608907.1 Drosophila melanogaster uncharacterized protein, transcript variant A (CG5828), mRNA.

Price & Availability↑

CloneID	OFa13789
Clone ID Related Accession (Same CDS sequence)	NM_001273156.2 , NM_135063.2
Accession Version	NM_135063.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1086bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jan 16, 2013 this sequence version replaced NM_135063.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGTACAGTA GCAGCTTGCT GCCGGATCCG GCTGTCTATC AGCCGGACAC CCTGGACCTG 
AACACGGATG GAAAGGCGGC GGATTACTGG TTCAACTGCT TCCGCGACAT GGTGGCCAAG 
TTCGCGAAGG TGGCGGCCAA GTCACAGGAG GAGGATCACA CGGCCACCCA GCGGGCGGAG 
CAGTTCCAGG CGGCGTATCT GCAGCGGCTG GAGGAGCACC AGCGTAATGT GCCAGTCAAC 
AAGGGCAAGG TGATTCTAGG CACCAGTGAG CTTCTCAAGC TAAACGAAAC CCTGTTGCGC 
CGCTACGGAT TTACAGATCC CTGGCTGAGA CAAAAGAGGC TGGAAAATGC ATCGGCTGTT 
GCCCGCCTGA AGCAGCGTCT GCAGGAATTG GATGCCCTGG CGGATGAGGA CACAAGGTGG 
ACGGAGCTGG TACGCGGTGT CCTCGCCGGC AACATGTTTG ACTGGGGCGC ACAGGCCATA 
TCTAACATAC TGGAGCAGGA CAGCAATTTC GGACTTCATT CAGCCCTGGA TCGCATTGAG 
AAGCGACCCT GGTTGCTTGA CAACCTGGAC AGCTGGTTGA ATCGCCTCAA GGGCGAGCCA 
CACAAGTGCG CCGTGGTCTT TGTGGACAAC AGCGGCGTGG ATGTGGTTCT GGGTGTGCTT 
CCCTTTGTCC GTGGACTGCT GAAACGTGGC ACCAAGGTGC TGCTCTGCGC CAACAGTGAA 
CCTGCTCTAA ATGATGTGAC CAGCGAGGAG CTGAAATCCT TGCTGGACGA CTGCTCGCGC 
GAGTGTGAGG TCCTGGAGCA GGCCTGGTCA AAGGGACAAC TACTGGTCTA TGCAAATGGA 
CAGACTGGTC CCTGCCTGGA TATGCGCACT CTCCCCAAGG AGCTGTGCGA CGCCATCGCC 
GCCAATGAGA CTGACCTGCT TGTGATTGAG GGCATGGGAC GCGCCCTGCA CACAAATCTG 
AATGCCCGCT TCGGCTGCGA GACCCTCAAG TTGGCCGTGA TAAAAAACAA ATGGCTGGCC 
AAGTACCTGG GCGGCGAGGA TATGTTCGCC GTCGTCTGCA AGTTCGAACC GGCTGCGCCC 
AGCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_608907.1
CDS	95..1180
Translation	MYSSSLLPDPAVYQPDTLDLNTDGKAADYWFNCFRDMVAKFAKVAAKSQEEDHTATQRAEQFQAAYLQRLEEHQRNVPVNKGKVILGTSELLKLNETLLRRYGFTDPWLRQKRLENASAVARLKQRLQELDALADEDTRWTELVRGVLAGNMFDWGAQAISNILEQDSNFGLHSALDRIEKRPWLLDNLDSWLNRLKGEPHKCAVVFVDNSGVDVVLGVLPFVRGLLKRGTKVLLCANSEPALNDVTSEELKSLLDDCSRECEVLEQAWSKGQLLVYANGQTGPCLDMRTLPKELCDAIAANETDLLVIEGMGRALHTNLNARFGCETLKLAVIKNKWLAKYLGGEDMFAVVCKFEPAAPS

Target ORF information:

RefSeq Version	NM_135063.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant A (CG5828), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_135063.2

ORF Insert Sequence:

ATGTACAGTA GCAGCTTGCT GCCGGATCCG GCTGTCTATC AGCCGGACAC CCTGGACCTG 
AACACGGATG GAAAGGCGGC GGATTACTGG TTCAACTGCT TCCGCGACAT GGTGGCCAAG 
TTCGCGAAGG TGGCGGCCAA GTCACAGGAG GAGGATCACA CGGCCACCCA GCGGGCGGAG 
CAGTTCCAGG CGGCGTATCT GCAGCGGCTG GAGGAGCACC AGCGTAATGT GCCAGTCAAC 
AAGGGCAAGG TGATTCTAGG CACCAGTGAG CTTCTCAAGC TAAACGAAAC CCTGTTGCGC 
CGCTACGGAT TTACAGATCC CTGGCTGAGA CAAAAGAGGC TGGAAAATGC ATCGGCTGTT 
GCCCGCCTGA AGCAGCGTCT GCAGGAATTG GATGCCCTGG CGGATGAGGA CACAAGGTGG 
ACGGAGCTGG TACGCGGTGT CCTCGCCGGC AACATGTTTG ACTGGGGCGC ACAGGCCATA 
TCTAACATAC TGGAGCAGGA CAGCAATTTC GGACTTCATT CAGCCCTGGA TCGCATTGAG 
AAGCGACCCT GGTTGCTTGA CAACCTGGAC AGCTGGTTGA ATCGCCTCAA GGGCGAGCCA 
CACAAGTGCG CCGTGGTCTT TGTGGACAAC AGCGGCGTGG ATGTGGTTCT GGGTGTGCTT 
CCCTTTGTCC GTGGACTGCT GAAACGTGGC ACCAAGGTGC TGCTCTGCGC CAACAGTGAA 
CCTGCTCTAA ATGATGTGAC CAGCGAGGAG CTGAAATCCT TGCTGGACGA CTGCTCGCGC 
GAGTGTGAGG TCCTGGAGCA GGCCTGGTCA AAGGGACAAC TACTGGTCTA TGCAAATGGA 
CAGACTGGTC CCTGCCTGGA TATGCGCACT CTCCCCAAGG AGCTGTGCGA CGCCATCGCC 
GCCAATGAGA CTGACCTGCT TGTGATTGAG GGCATGGGAC GCGCCCTGCA CACAAATCTG 
AATGCCCGCT TCGGCTGCGA GACCCTCAAG TTGGCCGTGA TAAAAAACAA ATGGCTGGCC 
AAGTACCTGG GCGGCGAGGA TATGTTCGCC GTCGTCTGCA AGTTCGAACC GGCTGCGCCC 
AGCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG5828 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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