CG3077 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG3077
Entrez Gene ID	33466
Full Name	CG3077 gene product from transcript CG3077-RB
Synonyms	DmSNX21,Dmel\CG3077
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2L Map Location: 23A5-23A5

mRNA and Protein(s)

mRNA	Protein	Name
NM_134865.3	NP_608709.1	uncharacterized protein, isoform A
NM_001273033.1	NP_001259962.1	uncharacterized protein, isoform B

Pathways from BioSystems

Homologies

Mus musculus (house mouse)	Snx21	NP_598685.2
	LOC709196	XP_001106730.1
Canis lupus familiaris (dog)	SNX21	XP_005635179.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP009095	XP_001238208.2
Homo sapiens (human)	SNX21	NP_219489.1
Pan troglodytes (chimpanzee)	SNX21	XP_003317018.1
Bos taurus (cattle)	SNX21	NP_001096798.1
Gallus gallus (chicken)	SNX21	XP_417474.4
Danio rerio (zebrafish)	snx21	NP_001070836.1
Rattus norvegicus (Norway rat)	Snx21	XP_006235697.1
Drosophila melanogaster (fruit fly)	CG3077	NP_001259962.1
Xenopus tropicalis (tropical clawed frog)	snx21	NP_001039048.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG3077 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG3077 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa13536	NM_134865.3 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant A (CG3077), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OFa16132	NM_001273033.1 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant B (CG3077), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG3077 ( NM_134865.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_608709.1 Drosophila melanogaster uncharacterized protein, transcript variant A (CG3077), mRNA.

Price & Availability↑

CloneID	OFa13536
Clone ID Related Accession (Same CDS sequence)	NM_134865.3
Accession Version	NM_134865.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 981bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jan 16, 2013 this sequence version replaced NM_134865.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCCCATTC ACGCCGTGAT GGCCAAGCGC CTGCACCACC AGCCTACCTT CGATGGGGAT 
CCACCCGGTC CGGATGAGCT GGACAGTCCA GCCATCGAGG CGGCGGCCCT CGACATTCCC 
CCTCCCGAAT CCGATAAGGC GCTCCAAAAA GGTGTCTGGG AGCGAGCCAC AAGTGCTGAG 
TATAAGCCGA CCACGGATGG GAGCACCGTG CTCCGCTTTG ACATCTTGCT GGCCCACATA 
ATGCCGCCCG ATGGCGAGGA TGTGAAGATC AAGCGGTTCG TGGTCTATGA GCTCACTGTT 
AAGCAGGATG GAGCCACGGA GGACACTCAG CCGGCAAAGA TTGAGCGCCG ATACACCGAC 
TTTCGGGAGC TTTATCTGGG CCTTAAGCGG CAGCATCCGG CGGAGATGGC CAACAAGTAC 
TTCCCAGCCA AGGTCCTGAT GGGTAACTTC AAGTCCGAGC TGATCGGCGA ACGGAGTGCA 
GCCTTCGAGG CATTCCTCAC GTATGTGGCA AGCCAGGCGA TGCTCCGGGA CTCGGAGTAC 
TTCCTGCGCT TCCTGCAGCA CGACGAACTG ACCAGGGCGT GCCAGTTTCT GGATGAGCGG 
CGTAACGAAA TGGCCATACC TATTCTGGAG AACTGTTTCC GCTTGCTGAA CAAGATATAC 
ATGAATCGAT CGAGGCCGGT GCTTTTGATA CTCTGCCGTC TAGTGGCTGC CTGCACCTCA 
TCCCCAGTGC CTCATCACGC GGCCGAGAGG TGGGCCCTGC TGGCACTGAG TCGCTTCGAG 
ACGTTGTGCG ATATTGATCT GCTGCCGCTC TACATTCCCC TGCTTCACAC CTGCGCCCAT 
CTGTGGTGGC AGCGCGGCCA GGACCAAAAG CCAATCACCG ACCGACTGAC TGACATGTCC 
AAGCAGGGCA TCAACACGGC GAACACCGAG AGCCTCATGC AGGCTATACA CAAGATCGAT 
CCTCGCACTG AAACAATTTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_608709.1
CDS	164..1144
Translation	MPIHAVMAKRLHHQPTFDGDPPGPDELDSPAIEAAALDIPPPESDKALQKGVWERATSAEYKPTTDGSTVLRFDILLAHIMPPDGEDVKIKRFVVYELTVKQDGATEDTQPAKIERRYTDFRELYLGLKRQHPAEMANKYFPAKVLMGNFKSELIGERSAAFEAFLTYVASQAMLRDSEYFLRFLQHDELTRACQFLDERRNEMAIPILENCFRLLNKIYMNRSRPVLLILCRLVAACTSSPVPHHAAERWALLALSRFETLCDIDLLPLYIPLLHTCAHLWWQRGQDQKPITDRLTDMSKQGINTANTESLMQAIHKIDPRTETI

Target ORF information:

RefSeq Version	NM_134865.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant A (CG3077), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_134865.3

ORF Insert Sequence:

ATGCCCATTC ACGCCGTGAT GGCCAAGCGC CTGCACCACC AGCCTACCTT CGATGGGGAT 
CCACCCGGTC CGGATGAGCT GGACAGTCCA GCCATCGAGG CGGCGGCCCT CGACATTCCC 
CCTCCCGAAT CCGATAAGGC GCTCCAAAAA GGTGTCTGGG AGCGAGCCAC AAGTGCTGAG 
TATAAGCCGA CCACGGATGG GAGCACCGTG CTCCGCTTTG ACATCTTGCT GGCCCACATA 
ATGCCGCCCG ATGGCGAGGA TGTGAAGATC AAGCGGTTCG TGGTCTATGA GCTCACTGTT 
AAGCAGGATG GAGCCACGGA GGACACTCAG CCGGCAAAGA TTGAGCGCCG ATACACCGAC 
TTTCGGGAGC TTTATCTGGG CCTTAAGCGG CAGCATCCGG CGGAGATGGC CAACAAGTAC 
TTCCCAGCCA AGGTCCTGAT GGGTAACTTC AAGTCCGAGC TGATCGGCGA ACGGAGTGCA 
GCCTTCGAGG CATTCCTCAC GTATGTGGCA AGCCAGGCGA TGCTCCGGGA CTCGGAGTAC 
TTCCTGCGCT TCCTGCAGCA CGACGAACTG ACCAGGGCGT GCCAGTTTCT GGATGAGCGG 
CGTAACGAAA TGGCCATACC TATTCTGGAG AACTGTTTCC GCTTGCTGAA CAAGATATAC 
ATGAATCGAT CGAGGCCGGT GCTTTTGATA CTCTGCCGTC TAGTGGCTGC CTGCACCTCA 
TCCCCAGTGC CTCATCACGC GGCCGAGAGG TGGGCCCTGC TGGCACTGAG TCGCTTCGAG 
ACGTTGTGCG ATATTGATCT GCTGCCGCTC TACATTCCCC TGCTTCACAC CTGCGCCCAT 
CTGTGGTGGC AGCGCGGCCA GGACCAAAAG CCAATCACCG ACCGACTGAC TGACATGTCC 
AAGCAGGGCA TCAACACGGC GAACACCGAG AGCCTCATGC AGGCTATACA CAAGATCGAT 
CCTCGCACTG AAACAATTTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CG3077 ( NM_001273033.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001259962.1 Drosophila melanogaster uncharacterized protein, transcript variant B (CG3077), mRNA.

Price & Availability↑

CloneID	OFa16132
Clone ID Related Accession (Same CDS sequence)	NM_001273033.1
Accession Version	NM_001273033.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 963bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCCAAGC GCCTGCACCA CCAGCCTACC TTCGATGGGG ATCCACCCGG TCCGGATGAG 
CTGGACAGTC CAGCCATCGA GGCGGCGGCC CTCGACATTC CCCCTCCCGA ATCCGATAAG 
GCGCTCCAAA AAGGTGTCTG GGAGCGAGCC ACAAGTGCTG AGTATAAGCC GACCACGGAT 
GGGAGCACCG TGCTCCGCTT TGACATCTTG CTGGCCCACA TAATGCCGCC CGATGGCGAG 
GATGTGAAGA TCAAGCGGTT CGTGGTCTAT GAGCTCACTG TTAAGCAGGA TGGAGCCACG 
GAGGACACTC AGCCGGCAAA GATTGAGCGC CGATACACCG ACTTTCGGGA GCTTTATCTG 
GGCCTTAAGC GGCAGCATCC GGCGGAGATG GCCAACAAGT ACTTCCCAGC CAAGGTCCTG 
ATGGGTAACT TCAAGTCCGA GCTGATCGGC GAACGGAGTG CAGCCTTCGA GGCATTCCTC 
ACGTATGTGG CAAGCCAGGC GATGCTCCGG GACTCGGAGT ACTTCCTGCG CTTCCTGCAG 
CACGACGAAC TGACCAGGGC GTGCCAGTTT CTGGATGAGC GGCGTAACGA AATGGCCATA 
CCTATTCTGG AGAACTGTTT CCGCTTGCTG AACAAGATAT ACATGAATCG ATCGAGGCCG 
GTGCTTTTGA TACTCTGCCG TCTAGTGGCT GCCTGCACCT CATCCCCAGT GCCTCATCAC 
GCGGCCGAGA GGTGGGCCCT GCTGGCACTG AGTCGCTTCG AGACGTTGTG CGATATTGAT 
CTGCTGCCGC TCTACATTCC CCTGCTTCAC ACCTGCGCCC ATCTGTGGTG GCAGCGCGGC 
CAGGACCAAA AGCCAATCAC CGACCGACTG ACTGACATGT CCAAGCAGGG CATCAACACG 
GCGAACACCG AGAGCCTCAT GCAGGCTATA CACAAGATCG ATCCTCGCAC TGAAACAATT 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001259962.1
CDS	173..1135
Translation	MAKRLHHQPTFDGDPPGPDELDSPAIEAAALDIPPPESDKALQKGVWERATSAEYKPTTDGSTVLRFDILLAHIMPPDGEDVKIKRFVVYELTVKQDGATEDTQPAKIERRYTDFRELYLGLKRQHPAEMANKYFPAKVLMGNFKSELIGERSAAFEAFLTYVASQAMLRDSEYFLRFLQHDELTRACQFLDERRNEMAIPILENCFRLLNKIYMNRSRPVLLILCRLVAACTSSPVPHHAAERWALLALSRFETLCDIDLLPLYIPLLHTCAHLWWQRGQDQKPITDRLTDMSKQGINTANTESLMQAIHKIDPRTETI

Target ORF information:

RefSeq Version	NM_001273033.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant B (CG3077), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001273033.1

ORF Insert Sequence:

ATGGCCAAGC GCCTGCACCA CCAGCCTACC TTCGATGGGG ATCCACCCGG TCCGGATGAG 
CTGGACAGTC CAGCCATCGA GGCGGCGGCC CTCGACATTC CCCCTCCCGA ATCCGATAAG 
GCGCTCCAAA AAGGTGTCTG GGAGCGAGCC ACAAGTGCTG AGTATAAGCC GACCACGGAT 
GGGAGCACCG TGCTCCGCTT TGACATCTTG CTGGCCCACA TAATGCCGCC CGATGGCGAG 
GATGTGAAGA TCAAGCGGTT CGTGGTCTAT GAGCTCACTG TTAAGCAGGA TGGAGCCACG 
GAGGACACTC AGCCGGCAAA GATTGAGCGC CGATACACCG ACTTTCGGGA GCTTTATCTG 
GGCCTTAAGC GGCAGCATCC GGCGGAGATG GCCAACAAGT ACTTCCCAGC CAAGGTCCTG 
ATGGGTAACT TCAAGTCCGA GCTGATCGGC GAACGGAGTG CAGCCTTCGA GGCATTCCTC 
ACGTATGTGG CAAGCCAGGC GATGCTCCGG GACTCGGAGT ACTTCCTGCG CTTCCTGCAG 
CACGACGAAC TGACCAGGGC GTGCCAGTTT CTGGATGAGC GGCGTAACGA AATGGCCATA 
CCTATTCTGG AGAACTGTTT CCGCTTGCTG AACAAGATAT ACATGAATCG ATCGAGGCCG 
GTGCTTTTGA TACTCTGCCG TCTAGTGGCT GCCTGCACCT CATCCCCAGT GCCTCATCAC 
GCGGCCGAGA GGTGGGCCCT GCTGGCACTG AGTCGCTTCG AGACGTTGTG CGATATTGAT 
CTGCTGCCGC TCTACATTCC CCTGCTTCAC ACCTGCGCCC ATCTGTGGTG GCAGCGCGGC 
CAGGACCAAA AGCCAATCAC CGACCGACTG ACTGACATGT CCAAGCAGGG CATCAACACG 
GCGAACACCG AGAGCCTCAT GCAGGCTATA CACAAGATCG ATCCTCGCAC TGAAACAATT 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG3077 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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