prtp cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	prtp
Entrez Gene ID	32124
Full Name	pretaporter
Synonyms	CG1837,Dmel\CG1837,anon-EST:Posey253,p47
General protein information	Preferred Names pretaporter Names CG1837 gene product from transcript CG1837-RB CG1837-PA CG1837-PB CG1837-PC CG1837-PD pret-a-porter prtp-PA prtp-PB prtp-PC prtp-PD
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: X Map Location: 10D7-10D7

mRNA and Protein(s)

mRNA	Protein	Name
NM_132514.3	NP_572742.1	pretaporter, isoform A
NM_001201654.2	NP_001188583.1	pretaporter, isoform B
NM_001272531.1	NP_001259460.1	pretaporter, isoform D
NM_001201655.2	NP_001188584.1	pretaporter, isoform C

Pathways from BioSystems

Homologies

Mus musculus (house mouse)	Txndc5	NP_663342.3
	TXNDC5	XP_002803633.1
Gallus gallus (chicken)	TXNDC5	NP_001006374.1
Drosophila melanogaster (fruit fly)	prtp	NP_572742.1
Canis lupus familiaris (dog)	TXNDC5	XP_005640077.1
Bos taurus (cattle)	TXNDC5	NP_001193661.1
Rattus norvegicus (Norway rat)	Txndc5	NP_001258259.1
Xenopus tropicalis (tropical clawed frog)	txndc5	NP_989186.1
Pan troglodytes (chimpanzee)	TXNDC5	XP_003311145.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP000044	XP_311114.4
Homo sapiens (human)	TXNDC5	NP_110437.2
Danio rerio (zebrafish)	txndc5	NP_998181.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Pretaporter relocates from the endoplasmic reticulum to the cell surface during apoptosis to serve as a ligand for Draper in the phagocytosis of apoptotic cells
Title: Pretaporter, a Drosophila protein serving as a ligand for Draper in the phagocytosis of apoptotic cells.

The following prtp gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the prtp cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OFa01314	NM_001201655.2 Latest version!	Drosophila melanogaster pretaporter (prtp), transcript variant C, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
OFa01314	NM_001201654.2 Latest version!	Drosophila melanogaster pretaporter (prtp), transcript variant B, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
OFa01314	NM_132514.3 Latest version!	Drosophila melanogaster pretaporter (prtp), transcript variant A, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
OFa02793	NM_001272531.1 Latest version!	Drosophila melanogaster pretaporter (prtp), transcript variant D, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

prtp ( NM_132514.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_572742.1 Drosophila melanogaster pretaporter (prtp), transcript variant A, mRNA.

Price & Availability↑

CloneID	OFa01314
Clone ID Related Accession (Same CDS sequence)	NM_132514.3 , NM_001201654.2 , NM_001201655.2
Accession Version	NM_132514.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1251bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	pretaporter, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Dec 17, 2009 this sequence version replaced NM_132514.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGTTGACCA GGTCCATTTT ATCCGTTGCC GTGTGTGGCC TCCTCCTGTC GCCCCTCCTG 
CCCATCACCC GTGCGTCCCA GGAGGAGGAC ACCGGCAAAC AGGACAAGCA GTTCACCGTG 
GAACTGGACC CAGAAACCTT CGACACTGCG ATTGCCGGCG GCAATGTCTT CGTCAAGTTC 
TTTGCTCCAT GGTGCGGCCA TTGCAAGCGT ATTCAGCCGC TGTGGGAACA GCTGGCCGAG 
ATCATGAATG TGGATAACCC CAAGGTGATC ATCGCCAAGG TGGACTGCAC CAAGCACCAG 
GGACTCTGCG CCACGCACCA GGTTACCGGC TATCCCACAC TGCGCCTCTT TAAGCTGGGC 
GAAGAGGAAT CGGTCAAGTT TAAGGGCACT CGCGACTTGC CCGCCATTAC CGATTTCATC 
AATAAGGAAC TGAGCGCACC CGCTGAGGCG GATCTGGGCG AGGTCAAGCG CGAGCAGGTC 
GAGAACCTTA ATATTGGCAA GGTGGTTGAC CTTACCGAAG ACACCTTTGC CAAGCACGTG 
TCCACCGGCA ATCACTTTGT CAAATTCTTT GCACCCTGGT GCAGTCATTG TCAGCGTTTG 
GCACCCACGT GGGAGGACCT GGCCAAGGAG CTGATTAAAG AGCCTACCGT AACTATCTCG 
AAGATCGACT GCACCCAGTT CCGTTCCATC TGCCAGGACT TTGAGGTCAA GGGGTATCCC 
ACTCTTCTCT GGATCGAGGA TGGCAAAAAG ATTGAAAAGT ACTCGGGTGC TCGCGATCTG 
TCCACGCTGA AAACGTACGT GGAGAAAATG GTGGGCGTGC CACTGGAGAA GACCGCTGGC 
GAGGCCGGCG ATGAGAAGGT GGTTATCGAG GAGGTTGCCG GCGAGGAGGA CGCAGCCAAG 
AAGCTGACTC CACAACAGCT GACTGGCGAG GACGAGTTCG ACCAAGCCAT TGCCGAGGGC 
GTTGCCTTCA TTAAGTTCTA TGCTCCGTGG TGTGGACACT GCCAGAAGCT GCAACCCACC 
TGGGAGCAGC TGGCCACGGA AACGCACCAG GCTCAGAGTT CCGTGAAAAT TGCCAAGGTT 
GACTGCACGG CGCCGGAGAA CAAGCAAGTG TGCATCGACC AGCAGGTGGA GGGCTATCCA 
ACTCTCTTCC TTTACAAGAA TGGTCAGCGC CAGAACGAGT ACGAAGGCAG CCGCTCACTG 
CCGGAGCTGC AGGCCTATCT GAAGAAGTTC CTCGGCCACG ACGAGCTCTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_572742.1
CDS	107..1357
Translation	MLTRSILSVAVCGLLLSPLLPITRASQEEDTGKQDKQFTVELDPETFDTAIAGGNVFVKFFAPWCGHCKRIQPLWEQLAEIMNVDNPKVIIAKVDCTKHQGLCATHQVTGYPTLRLFKLGEEESVKFKGTRDLPAITDFINKELSAPAEADLGEVKREQVENLNIGKVVDLTEDTFAKHVSTGNHFVKFFAPWCSHCQRLAPTWEDLAKELIKEPTVTISKIDCTQFRSICQDFEVKGYPTLLWIEDGKKIEKYSGARDLSTLKTYVEKMVGVPLEKTAGEAGDEKVVIEEVAGEEDAAKKLTPQQLTGEDEFDQAIAEGVAFIKFYAPWCGHCQKLQPTWEQLATETHQAQSSVKIAKVDCTAPENKQVCIDQQVEGYPTLFLYKNGQRQNEYEGSRSLPELQAYLKKFLGHDEL

Target ORF information:

RefSeq Version	NM_132514.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster pretaporter (prtp), transcript variant A, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_132514.3

ORF Insert Sequence:

ATGTTGACCA GGTCCATTTT ATCCGTTGCC GTGTGTGGCC TCCTCCTGTC GCCCCTCCTG 
CCCATCACCC GTGCGTCCCA GGAGGAGGAC ACCGGCAAAC AGGACAAGCA GTTCACCGTG 
GAACTGGACC CAGAAACCTT CGACACTGCG ATTGCCGGCG GCAATGTCTT CGTCAAGTTC 
TTTGCTCCAT GGTGCGGCCA TTGCAAGCGT ATTCAGCCGC TGTGGGAACA GCTGGCCGAG 
ATCATGAATG TGGATAACCC CAAGGTGATC ATCGCCAAGG TGGACTGCAC CAAGCACCAG 
GGACTCTGCG CCACGCACCA GGTTACCGGC TATCCCACAC TGCGCCTCTT TAAGCTGGGC 
GAAGAGGAAT CGGTCAAGTT TAAGGGCACT CGCGACTTGC CCGCCATTAC CGATTTCATC 
AATAAGGAAC TGAGCGCACC CGCTGAGGCG GATCTGGGCG AGGTCAAGCG CGAGCAGGTC 
GAGAACCTTA ATATTGGCAA GGTGGTTGAC CTTACCGAAG ACACCTTTGC CAAGCACGTG 
TCCACCGGCA ATCACTTTGT CAAATTCTTT GCACCCTGGT GCAGTCATTG TCAGCGTTTG 
GCACCCACGT GGGAGGACCT GGCCAAGGAG CTGATTAAAG AGCCTACCGT AACTATCTCG 
AAGATCGACT GCACCCAGTT CCGTTCCATC TGCCAGGACT TTGAGGTCAA GGGGTATCCC 
ACTCTTCTCT GGATCGAGGA TGGCAAAAAG ATTGAAAAGT ACTCGGGTGC TCGCGATCTG 
TCCACGCTGA AAACGTACGT GGAGAAAATG GTGGGCGTGC CACTGGAGAA GACCGCTGGC 
GAGGCCGGCG ATGAGAAGGT GGTTATCGAG GAGGTTGCCG GCGAGGAGGA CGCAGCCAAG 
AAGCTGACTC CACAACAGCT GACTGGCGAG GACGAGTTCG ACCAAGCCAT TGCCGAGGGC 
GTTGCCTTCA TTAAGTTCTA TGCTCCGTGG TGTGGACACT GCCAGAAGCT GCAACCCACC 
TGGGAGCAGC TGGCCACGGA AACGCACCAG GCTCAGAGTT CCGTGAAAAT TGCCAAGGTT 
GACTGCACGG CGCCGGAGAA CAAGCAAGTG TGCATCGACC AGCAGGTGGA GGGCTATCCA 
ACTCTCTTCC TTTACAAGAA TGGTCAGCGC CAGAACGAGT ACGAAGGCAG CCGCTCACTG 
CCGGAGCTGC AGGCCTATCT GAAGAAGTTC CTCGGCCACG ACGAGCTCTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

prtp ( NM_001201654.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001188583.1 Drosophila melanogaster pretaporter (prtp), transcript variant B, mRNA.

Price & Availability↑

CloneID	OFa01314
Clone ID Related Accession (Same CDS sequence)	NM_132514.3 , NM_001201654.2 , NM_001201655.2
Accession Version	NM_001201654.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1251bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	pretaporter, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_001201654.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGTTGACCA GGTCCATTTT ATCCGTTGCC GTGTGTGGCC TCCTCCTGTC GCCCCTCCTG 
CCCATCACCC GTGCGTCCCA GGAGGAGGAC ACCGGCAAAC AGGACAAGCA GTTCACCGTG 
GAACTGGACC CAGAAACCTT CGACACTGCG ATTGCCGGCG GCAATGTCTT CGTCAAGTTC 
TTTGCTCCAT GGTGCGGCCA TTGCAAGCGT ATTCAGCCGC TGTGGGAACA GCTGGCCGAG 
ATCATGAATG TGGATAACCC CAAGGTGATC ATCGCCAAGG TGGACTGCAC CAAGCACCAG 
GGACTCTGCG CCACGCACCA GGTTACCGGC TATCCCACAC TGCGCCTCTT TAAGCTGGGC 
GAAGAGGAAT CGGTCAAGTT TAAGGGCACT CGCGACTTGC CCGCCATTAC CGATTTCATC 
AATAAGGAAC TGAGCGCACC CGCTGAGGCG GATCTGGGCG AGGTCAAGCG CGAGCAGGTC 
GAGAACCTTA ATATTGGCAA GGTGGTTGAC CTTACCGAAG ACACCTTTGC CAAGCACGTG 
TCCACCGGCA ATCACTTTGT CAAATTCTTT GCACCCTGGT GCAGTCATTG TCAGCGTTTG 
GCACCCACGT GGGAGGACCT GGCCAAGGAG CTGATTAAAG AGCCTACCGT AACTATCTCG 
AAGATCGACT GCACCCAGTT CCGTTCCATC TGCCAGGACT TTGAGGTCAA GGGGTATCCC 
ACTCTTCTCT GGATCGAGGA TGGCAAAAAG ATTGAAAAGT ACTCGGGTGC TCGCGATCTG 
TCCACGCTGA AAACGTACGT GGAGAAAATG GTGGGCGTGC CACTGGAGAA GACCGCTGGC 
GAGGCCGGCG ATGAGAAGGT GGTTATCGAG GAGGTTGCCG GCGAGGAGGA CGCAGCCAAG 
AAGCTGACTC CACAACAGCT GACTGGCGAG GACGAGTTCG ACCAAGCCAT TGCCGAGGGC 
GTTGCCTTCA TTAAGTTCTA TGCTCCGTGG TGTGGACACT GCCAGAAGCT GCAACCCACC 
TGGGAGCAGC TGGCCACGGA AACGCACCAG GCTCAGAGTT CCGTGAAAAT TGCCAAGGTT 
GACTGCACGG CGCCGGAGAA CAAGCAAGTG TGCATCGACC AGCAGGTGGA GGGCTATCCA 
ACTCTCTTCC TTTACAAGAA TGGTCAGCGC CAGAACGAGT ACGAAGGCAG CCGCTCACTG 
CCGGAGCTGC AGGCCTATCT GAAGAAGTTC CTCGGCCACG ACGAGCTCTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001188583.1
CDS	90..1340
Translation	MLTRSILSVAVCGLLLSPLLPITRASQEEDTGKQDKQFTVELDPETFDTAIAGGNVFVKFFAPWCGHCKRIQPLWEQLAEIMNVDNPKVIIAKVDCTKHQGLCATHQVTGYPTLRLFKLGEEESVKFKGTRDLPAITDFINKELSAPAEADLGEVKREQVENLNIGKVVDLTEDTFAKHVSTGNHFVKFFAPWCSHCQRLAPTWEDLAKELIKEPTVTISKIDCTQFRSICQDFEVKGYPTLLWIEDGKKIEKYSGARDLSTLKTYVEKMVGVPLEKTAGEAGDEKVVIEEVAGEEDAAKKLTPQQLTGEDEFDQAIAEGVAFIKFYAPWCGHCQKLQPTWEQLATETHQAQSSVKIAKVDCTAPENKQVCIDQQVEGYPTLFLYKNGQRQNEYEGSRSLPELQAYLKKFLGHDEL

Target ORF information:

RefSeq Version	NM_001201654.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster pretaporter (prtp), transcript variant B, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001201654.2

ORF Insert Sequence:

ATGTTGACCA GGTCCATTTT ATCCGTTGCC GTGTGTGGCC TCCTCCTGTC GCCCCTCCTG 
CCCATCACCC GTGCGTCCCA GGAGGAGGAC ACCGGCAAAC AGGACAAGCA GTTCACCGTG 
GAACTGGACC CAGAAACCTT CGACACTGCG ATTGCCGGCG GCAATGTCTT CGTCAAGTTC 
TTTGCTCCAT GGTGCGGCCA TTGCAAGCGT ATTCAGCCGC TGTGGGAACA GCTGGCCGAG 
ATCATGAATG TGGATAACCC CAAGGTGATC ATCGCCAAGG TGGACTGCAC CAAGCACCAG 
GGACTCTGCG CCACGCACCA GGTTACCGGC TATCCCACAC TGCGCCTCTT TAAGCTGGGC 
GAAGAGGAAT CGGTCAAGTT TAAGGGCACT CGCGACTTGC CCGCCATTAC CGATTTCATC 
AATAAGGAAC TGAGCGCACC CGCTGAGGCG GATCTGGGCG AGGTCAAGCG CGAGCAGGTC 
GAGAACCTTA ATATTGGCAA GGTGGTTGAC CTTACCGAAG ACACCTTTGC CAAGCACGTG 
TCCACCGGCA ATCACTTTGT CAAATTCTTT GCACCCTGGT GCAGTCATTG TCAGCGTTTG 
GCACCCACGT GGGAGGACCT GGCCAAGGAG CTGATTAAAG AGCCTACCGT AACTATCTCG 
AAGATCGACT GCACCCAGTT CCGTTCCATC TGCCAGGACT TTGAGGTCAA GGGGTATCCC 
ACTCTTCTCT GGATCGAGGA TGGCAAAAAG ATTGAAAAGT ACTCGGGTGC TCGCGATCTG 
TCCACGCTGA AAACGTACGT GGAGAAAATG GTGGGCGTGC CACTGGAGAA GACCGCTGGC 
GAGGCCGGCG ATGAGAAGGT GGTTATCGAG GAGGTTGCCG GCGAGGAGGA CGCAGCCAAG 
AAGCTGACTC CACAACAGCT GACTGGCGAG GACGAGTTCG ACCAAGCCAT TGCCGAGGGC 
GTTGCCTTCA TTAAGTTCTA TGCTCCGTGG TGTGGACACT GCCAGAAGCT GCAACCCACC 
TGGGAGCAGC TGGCCACGGA AACGCACCAG GCTCAGAGTT CCGTGAAAAT TGCCAAGGTT 
GACTGCACGG CGCCGGAGAA CAAGCAAGTG TGCATCGACC AGCAGGTGGA GGGCTATCCA 
ACTCTCTTCC TTTACAAGAA TGGTCAGCGC CAGAACGAGT ACGAAGGCAG CCGCTCACTG 
CCGGAGCTGC AGGCCTATCT GAAGAAGTTC CTCGGCCACG ACGAGCTCTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

prtp ( NM_001201655.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001188584.1 Drosophila melanogaster pretaporter (prtp), transcript variant C, mRNA.

Price & Availability↑

CloneID	OFa01314
Clone ID Related Accession (Same CDS sequence)	NM_132514.3 , NM_001201654.2 , NM_001201655.2
Accession Version	NM_001201655.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1251bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	pretaporter, isoform C
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_001201655.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGTTGACCA GGTCCATTTT ATCCGTTGCC GTGTGTGGCC TCCTCCTGTC GCCCCTCCTG 
CCCATCACCC GTGCGTCCCA GGAGGAGGAC ACCGGCAAAC AGGACAAGCA GTTCACCGTG 
GAACTGGACC CAGAAACCTT CGACACTGCG ATTGCCGGCG GCAATGTCTT CGTCAAGTTC 
TTTGCTCCAT GGTGCGGCCA TTGCAAGCGT ATTCAGCCGC TGTGGGAACA GCTGGCCGAG 
ATCATGAATG TGGATAACCC CAAGGTGATC ATCGCCAAGG TGGACTGCAC CAAGCACCAG 
GGACTCTGCG CCACGCACCA GGTTACCGGC TATCCCACAC TGCGCCTCTT TAAGCTGGGC 
GAAGAGGAAT CGGTCAAGTT TAAGGGCACT CGCGACTTGC CCGCCATTAC CGATTTCATC 
AATAAGGAAC TGAGCGCACC CGCTGAGGCG GATCTGGGCG AGGTCAAGCG CGAGCAGGTC 
GAGAACCTTA ATATTGGCAA GGTGGTTGAC CTTACCGAAG ACACCTTTGC CAAGCACGTG 
TCCACCGGCA ATCACTTTGT CAAATTCTTT GCACCCTGGT GCAGTCATTG TCAGCGTTTG 
GCACCCACGT GGGAGGACCT GGCCAAGGAG CTGATTAAAG AGCCTACCGT AACTATCTCG 
AAGATCGACT GCACCCAGTT CCGTTCCATC TGCCAGGACT TTGAGGTCAA GGGGTATCCC 
ACTCTTCTCT GGATCGAGGA TGGCAAAAAG ATTGAAAAGT ACTCGGGTGC TCGCGATCTG 
TCCACGCTGA AAACGTACGT GGAGAAAATG GTGGGCGTGC CACTGGAGAA GACCGCTGGC 
GAGGCCGGCG ATGAGAAGGT GGTTATCGAG GAGGTTGCCG GCGAGGAGGA CGCAGCCAAG 
AAGCTGACTC CACAACAGCT GACTGGCGAG GACGAGTTCG ACCAAGCCAT TGCCGAGGGC 
GTTGCCTTCA TTAAGTTCTA TGCTCCGTGG TGTGGACACT GCCAGAAGCT GCAACCCACC 
TGGGAGCAGC TGGCCACGGA AACGCACCAG GCTCAGAGTT CCGTGAAAAT TGCCAAGGTT 
GACTGCACGG CGCCGGAGAA CAAGCAAGTG TGCATCGACC AGCAGGTGGA GGGCTATCCA 
ACTCTCTTCC TTTACAAGAA TGGTCAGCGC CAGAACGAGT ACGAAGGCAG CCGCTCACTG 
CCGGAGCTGC AGGCCTATCT GAAGAAGTTC CTCGGCCACG ACGAGCTCTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001188584.1
CDS	84..1334
Translation	MLTRSILSVAVCGLLLSPLLPITRASQEEDTGKQDKQFTVELDPETFDTAIAGGNVFVKFFAPWCGHCKRIQPLWEQLAEIMNVDNPKVIIAKVDCTKHQGLCATHQVTGYPTLRLFKLGEEESVKFKGTRDLPAITDFINKELSAPAEADLGEVKREQVENLNIGKVVDLTEDTFAKHVSTGNHFVKFFAPWCSHCQRLAPTWEDLAKELIKEPTVTISKIDCTQFRSICQDFEVKGYPTLLWIEDGKKIEKYSGARDLSTLKTYVEKMVGVPLEKTAGEAGDEKVVIEEVAGEEDAAKKLTPQQLTGEDEFDQAIAEGVAFIKFYAPWCGHCQKLQPTWEQLATETHQAQSSVKIAKVDCTAPENKQVCIDQQVEGYPTLFLYKNGQRQNEYEGSRSLPELQAYLKKFLGHDEL

Target ORF information:

RefSeq Version	NM_001201655.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster pretaporter (prtp), transcript variant C, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001201655.2

ORF Insert Sequence:

ATGTTGACCA GGTCCATTTT ATCCGTTGCC GTGTGTGGCC TCCTCCTGTC GCCCCTCCTG 
CCCATCACCC GTGCGTCCCA GGAGGAGGAC ACCGGCAAAC AGGACAAGCA GTTCACCGTG 
GAACTGGACC CAGAAACCTT CGACACTGCG ATTGCCGGCG GCAATGTCTT CGTCAAGTTC 
TTTGCTCCAT GGTGCGGCCA TTGCAAGCGT ATTCAGCCGC TGTGGGAACA GCTGGCCGAG 
ATCATGAATG TGGATAACCC CAAGGTGATC ATCGCCAAGG TGGACTGCAC CAAGCACCAG 
GGACTCTGCG CCACGCACCA GGTTACCGGC TATCCCACAC TGCGCCTCTT TAAGCTGGGC 
GAAGAGGAAT CGGTCAAGTT TAAGGGCACT CGCGACTTGC CCGCCATTAC CGATTTCATC 
AATAAGGAAC TGAGCGCACC CGCTGAGGCG GATCTGGGCG AGGTCAAGCG CGAGCAGGTC 
GAGAACCTTA ATATTGGCAA GGTGGTTGAC CTTACCGAAG ACACCTTTGC CAAGCACGTG 
TCCACCGGCA ATCACTTTGT CAAATTCTTT GCACCCTGGT GCAGTCATTG TCAGCGTTTG 
GCACCCACGT GGGAGGACCT GGCCAAGGAG CTGATTAAAG AGCCTACCGT AACTATCTCG 
AAGATCGACT GCACCCAGTT CCGTTCCATC TGCCAGGACT TTGAGGTCAA GGGGTATCCC 
ACTCTTCTCT GGATCGAGGA TGGCAAAAAG ATTGAAAAGT ACTCGGGTGC TCGCGATCTG 
TCCACGCTGA AAACGTACGT GGAGAAAATG GTGGGCGTGC CACTGGAGAA GACCGCTGGC 
GAGGCCGGCG ATGAGAAGGT GGTTATCGAG GAGGTTGCCG GCGAGGAGGA CGCAGCCAAG 
AAGCTGACTC CACAACAGCT GACTGGCGAG GACGAGTTCG ACCAAGCCAT TGCCGAGGGC 
GTTGCCTTCA TTAAGTTCTA TGCTCCGTGG TGTGGACACT GCCAGAAGCT GCAACCCACC 
TGGGAGCAGC TGGCCACGGA AACGCACCAG GCTCAGAGTT CCGTGAAAAT TGCCAAGGTT 
GACTGCACGG CGCCGGAGAA CAAGCAAGTG TGCATCGACC AGCAGGTGGA GGGCTATCCA 
ACTCTCTTCC TTTACAAGAA TGGTCAGCGC CAGAACGAGT ACGAAGGCAG CCGCTCACTG 
CCGGAGCTGC AGGCCTATCT GAAGAAGTTC CTCGGCCACG ACGAGCTCTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

prtp ( NM_001272531.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001259460.1 Drosophila melanogaster pretaporter (prtp), transcript variant D, mRNA.

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CloneID	OFa02793
Clone ID Related Accession (Same CDS sequence)	NM_001272531.1
Accession Version	NM_001272531.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1062bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	pretaporter, isoform D
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGTGCGGCC ATTGCAAGCG TATTCAGCCG CTGTGGGAAC AGCTGGCCGA GATCATGAAT 
GTGGATAACC CCAAGGTGAT CATCGCCAAG GTGGACTGCA CCAAGCACCA GGGACTCTGC 
GCCACGCACC AGGTTACCGG CTATCCCACA CTGCGCCTCT TTAAGCTGGG CGAAGAGGAA 
TCGGTCAAGT TTAAGGGCAC TCGCGACTTG CCCGCCATTA CCGATTTCAT CAATAAGGAA 
CTGAGCGCAC CCGCTGAGGC GGATCTGGGC GAGGTCAAGC GCGAGCAGGT CGAGAACCTT 
AATATTGGCA AGGTGGTTGA CCTTACCGAA GACACCTTTG CCAAGCACGT GTCCACCGGC 
AATCACTTTG TCAAATTCTT TGCACCCTGG TGCAGTCATT GTCAGCGTTT GGCACCCACG 
TGGGAGGACC TGGCCAAGGA GCTGATTAAA GAGCCTACCG TAACTATCTC GAAGATCGAC 
TGCACCCAGT TCCGTTCCAT CTGCCAGGAC TTTGAGGTCA AGGGGTATCC CACTCTTCTC 
TGGATCGAGG ATGGCAAAAA GATTGAAAAG TACTCGGGTG CTCGCGATCT GTCCACGCTG 
AAAACGTACG TGGAGAAAAT GGTGGGCGTG CCACTGGAGA AGACCGCTGG CGAGGCCGGC 
GATGAGAAGG TGGTTATCGA GGAGGTTGCC GGCGAGGAGG ACGCAGCCAA GAAGCTGACT 
CCACAACAGC TGACTGGCGA GGACGAGTTC GACCAAGCCA TTGCCGAGGG CGTTGCCTTC 
ATTAAGTTCT ATGCTCCGTG GTGTGGACAC TGCCAGAAGC TGCAACCCAC CTGGGAGCAG 
CTGGCCACGG AAACGCACCA GGCTCAGAGT TCCGTGAAAA TTGCCAAGGT TGACTGCACG 
GCGCCGGAGA ACAAGCAAGT GTGCATCGAC CAGCAGGTGG AGGGCTATCC AACTCTCTTC 
CTTTACAAGA ATGGTCAGCG CCAGAACGAG TACGAAGGCA GCCGCTCACT GCCGGAGCTG 
CAGGCCTATC TGAAGAAGTT CCTCGGCCAC GACGAGCTCT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001259460.1
CDS	497..1558
Translation	MCGHCKRIQPLWEQLAEIMNVDNPKVIIAKVDCTKHQGLCATHQVTGYPTLRLFKLGEEESVKFKGTRDLPAITDFINKELSAPAEADLGEVKREQVENLNIGKVVDLTEDTFAKHVSTGNHFVKFFAPWCSHCQRLAPTWEDLAKELIKEPTVTISKIDCTQFRSICQDFEVKGYPTLLWIEDGKKIEKYSGARDLSTLKTYVEKMVGVPLEKTAGEAGDEKVVIEEVAGEEDAAKKLTPQQLTGEDEFDQAIAEGVAFIKFYAPWCGHCQKLQPTWEQLATETHQAQSSVKIAKVDCTAPENKQVCIDQQVEGYPTLFLYKNGQRQNEYEGSRSLPELQAYLKKFLGHDEL

Target ORF information:

RefSeq Version	NM_001272531.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster pretaporter (prtp), transcript variant D, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001272531.1

ORF Insert Sequence:

ATGTGCGGCC ATTGCAAGCG TATTCAGCCG CTGTGGGAAC AGCTGGCCGA GATCATGAAT 
GTGGATAACC CCAAGGTGAT CATCGCCAAG GTGGACTGCA CCAAGCACCA GGGACTCTGC 
GCCACGCACC AGGTTACCGG CTATCCCACA CTGCGCCTCT TTAAGCTGGG CGAAGAGGAA 
TCGGTCAAGT TTAAGGGCAC TCGCGACTTG CCCGCCATTA CCGATTTCAT CAATAAGGAA 
CTGAGCGCAC CCGCTGAGGC GGATCTGGGC GAGGTCAAGC GCGAGCAGGT CGAGAACCTT 
AATATTGGCA AGGTGGTTGA CCTTACCGAA GACACCTTTG CCAAGCACGT GTCCACCGGC 
AATCACTTTG TCAAATTCTT TGCACCCTGG TGCAGTCATT GTCAGCGTTT GGCACCCACG 
TGGGAGGACC TGGCCAAGGA GCTGATTAAA GAGCCTACCG TAACTATCTC GAAGATCGAC 
TGCACCCAGT TCCGTTCCAT CTGCCAGGAC TTTGAGGTCA AGGGGTATCC CACTCTTCTC 
TGGATCGAGG ATGGCAAAAA GATTGAAAAG TACTCGGGTG CTCGCGATCT GTCCACGCTG 
AAAACGTACG TGGAGAAAAT GGTGGGCGTG CCACTGGAGA AGACCGCTGG CGAGGCCGGC 
GATGAGAAGG TGGTTATCGA GGAGGTTGCC GGCGAGGAGG ACGCAGCCAA GAAGCTGACT 
CCACAACAGC TGACTGGCGA GGACGAGTTC GACCAAGCCA TTGCCGAGGG CGTTGCCTTC 
ATTAAGTTCT ATGCTCCGTG GTGTGGACAC TGCCAGAAGC TGCAACCCAC CTGGGAGCAG 
CTGGCCACGG AAACGCACCA GGCTCAGAGT TCCGTGAAAA TTGCCAAGGT TGACTGCACG 
GCGCCGGAGA ACAAGCAAGT GTGCATCGAC CAGCAGGTGG AGGGCTATCC AACTCTCTTC 
CTTTACAAGA ATGGTCAGCG CCAGAACGAG TACGAAGGCA GCCGCTCACT GCCGGAGCTG 
CAGGCCTATC TGAAGAAGTT CCTCGGCCAC GACGAGCTCT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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prtp cDNA ORF clone, Drosophila melanogaster(fruit fly)

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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