CG31809 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG31809
Entrez Gene ID	318954
Full Name	CG31809 gene product from transcript CG31809-RB
Synonyms	Dmel\CG31809
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2L Map Location: 36B2-36B2

mRNA and Protein(s)

mRNA	Protein	Name
NM_001299069.1	NP_001285998.1	uncharacterized protein, isoform C
NM_001103698.2	NP_001097168.1	uncharacterized protein, isoform B

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	HSDL1	XP_003315261.1
Gallus gallus (chicken)	HSDL1	NP_001005837.1
Danio rerio (zebrafish)	hsdl1	NP_001008607.1
Drosophila melanogaster (fruit fly)	CG31809	NP_001097168.1
Drosophila melanogaster (fruit fly)	CG13284	NP_001260522.1
Oryza sativa (rice)	Os11g0432600	NP_001067794.1
Mus musculus (house mouse)	Hsdl1	NP_780394.1
	HSDL1	XP_001112266.1
Drosophila melanogaster (fruit fly)	CG31810	NP_724023.1
Homo sapiens (human)	HSDL1	NP_113651.4
Canis lupus familiaris (dog)	HSDL1	XP_536765.2
Rattus norvegicus (Norway rat)	Hsdl1	NP_001020067.1
Xenopus tropicalis (tropical clawed frog)	LOC100489686	XP_002937365.1
Bos taurus (cattle)	HSDL1	NP_001092341.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP008570	XP_314676.4
Arabidopsis thaliana (thale cress)	KCR2	NP_173856.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG31809 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG31809 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa16589	NM_001299069.1 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant C (CG31809), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OFa16589	NM_001103698.2 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant B (CG31809), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG31809 ( NM_001299069.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001285998.1 Drosophila melanogaster uncharacterized protein, transcript variant C (CG31809), mRNA.

Price & Availability↑

CloneID	OFa16589
Clone ID Related Accession (Same CDS sequence)	NM_001299069.1 , NM_001103698.2
Accession Version	NM_001299069.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 951bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform C
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGGTCTTA TCTACATAGT GGGTTCTCTT AGCATCGCCG CTTTTCTCTA CGAAAACTTA 
AAGTCCTTGT TCAGCATTAT CAAGTCTGTT GTGGAACCGT TCTTCAGGCC GAATTTGCCA 
AAGACTTTGG CGGAAAAATT CGGAAATTGG GCAGTGGTGA CCGGTGCGAC CGATGGAATC 
GGAAAGGAAT ATGCCAGGGA GTTGGCTCGT CAGGGTCTTA ACCTGGTGCT CGTTTCGCGG 
AAAGAGGAAA AGCTGATTGC AGTCACCAAC GAGATTGGGA GCCAATATAA TGTGAAAATC 
AAGTGGATTG TTGCGGACTT TGCAAAGGGA CGCGAGGTGT ACGCTCATAT CGAAAAGGAA 
CTGAATGGAA TCGAAGTTGG AATTTTGGTC AACAATGTGG GCACGATTCA CGACCCGGAA 
AGCCTTGACA AGGTATCGGA GGACATGTTG TGGGACCTTC TCACCGTCAA CGTGGGATCG 
GTTACCATGC TCACCCGCAA GATCCTGCCC CAGATGATTA GTCGTCGAAA GGGAGCAATT 
GTTAACCTCG GATCCTCCTC CGAACTCCAG CCCCATCCCA ATTTGACTGC TTATGCGGCT 
ACCAAGAAGT TCGTTACCCA TTTTACTAAA GGTTTAGAAT ATGAGGTGGC CGAACACAAT 
ATCCATGTGC AGTTGGTTAT GCCAGCCTTT GTGGCCACCA ATATGAATTC CTATTCCGAT 
AAAGTGAGGC AAGGAGGACT GCTTTTCCCC AACGCTTATT CCTATGCCCG GTCCGCAGTC 
TTTACACTGG GAAAGACGAG CGAGACCAAC GGTTTCTGGG TTCATGGATT ACAGTACGCC 
CTCATGAAGT TGTTTCCCAT GGAGATTCGT ACTTACTTTG TATACCAACT CTTTAAGCGA 
ATGAGAATCG AGGCCATGGA GCACAGACTG AAAAACCAAA AACTTTCTTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001285998.1
CDS	110..1060
Translation	MGLIYIVGSLSIAAFLYENLKSLFSIIKSVVEPFFRPNLPKTLAEKFGNWAVVTGATDGIGKEYARELARQGLNLVLVSRKEEKLIAVTNEIGSQYNVKIKWIVADFAKGREVYAHIEKELNGIEVGILVNNVGTIHDPESLDKVSEDMLWDLLTVNVGSVTMLTRKILPQMISRRKGAIVNLGSSSELQPHPNLTAYAATKKFVTHFTKGLEYEVAEHNIHVQLVMPAFVATNMNSYSDKVRQGGLLFPNAYSYARSAVFTLGKTSETNGFWVHGLQYALMKLFPMEIRTYFVYQLFKRMRIEAMEHRLKNQKLS

Target ORF information:

RefSeq Version	NM_001299069.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant C (CG31809), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001299069.1

ORF Insert Sequence:

ATGGGTCTTA TCTACATAGT GGGTTCTCTT AGCATCGCCG CTTTTCTCTA CGAAAACTTA 
AAGTCCTTGT TCAGCATTAT CAAGTCTGTT GTGGAACCGT TCTTCAGGCC GAATTTGCCA 
AAGACTTTGG CGGAAAAATT CGGAAATTGG GCAGTGGTGA CCGGTGCGAC CGATGGAATC 
GGAAAGGAAT ATGCCAGGGA GTTGGCTCGT CAGGGTCTTA ACCTGGTGCT CGTTTCGCGG 
AAAGAGGAAA AGCTGATTGC AGTCACCAAC GAGATTGGGA GCCAATATAA TGTGAAAATC 
AAGTGGATTG TTGCGGACTT TGCAAAGGGA CGCGAGGTGT ACGCTCATAT CGAAAAGGAA 
CTGAATGGAA TCGAAGTTGG AATTTTGGTC AACAATGTGG GCACGATTCA CGACCCGGAA 
AGCCTTGACA AGGTATCGGA GGACATGTTG TGGGACCTTC TCACCGTCAA CGTGGGATCG 
GTTACCATGC TCACCCGCAA GATCCTGCCC CAGATGATTA GTCGTCGAAA GGGAGCAATT 
GTTAACCTCG GATCCTCCTC CGAACTCCAG CCCCATCCCA ATTTGACTGC TTATGCGGCT 
ACCAAGAAGT TCGTTACCCA TTTTACTAAA GGTTTAGAAT ATGAGGTGGC CGAACACAAT 
ATCCATGTGC AGTTGGTTAT GCCAGCCTTT GTGGCCACCA ATATGAATTC CTATTCCGAT 
AAAGTGAGGC AAGGAGGACT GCTTTTCCCC AACGCTTATT CCTATGCCCG GTCCGCAGTC 
TTTACACTGG GAAAGACGAG CGAGACCAAC GGTTTCTGGG TTCATGGATT ACAGTACGCC 
CTCATGAAGT TGTTTCCCAT GGAGATTCGT ACTTACTTTG TATACCAACT CTTTAAGCGA 
ATGAGAATCG AGGCCATGGA GCACAGACTG AAAAACCAAA AACTTTCTTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CG31809 ( NM_001103698.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001097168.1 Drosophila melanogaster uncharacterized protein, transcript variant B (CG31809), mRNA.

Price & Availability↑

CloneID	OFa16589
Clone ID Related Accession (Same CDS sequence)	NM_001299069.1 , NM_001103698.2
Accession Version	NM_001103698.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 951bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jan 16, 2013 this sequence version replaced NM_001103698.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGGTCTTA TCTACATAGT GGGTTCTCTT AGCATCGCCG CTTTTCTCTA CGAAAACTTA 
AAGTCCTTGT TCAGCATTAT CAAGTCTGTT GTGGAACCGT TCTTCAGGCC GAATTTGCCA 
AAGACTTTGG CGGAAAAATT CGGAAATTGG GCAGTGGTGA CCGGTGCGAC CGATGGAATC 
GGAAAGGAAT ATGCCAGGGA GTTGGCTCGT CAGGGTCTTA ACCTGGTGCT CGTTTCGCGG 
AAAGAGGAAA AGCTGATTGC AGTCACCAAC GAGATTGGGA GCCAATATAA TGTGAAAATC 
AAGTGGATTG TTGCGGACTT TGCAAAGGGA CGCGAGGTGT ACGCTCATAT CGAAAAGGAA 
CTGAATGGAA TCGAAGTTGG AATTTTGGTC AACAATGTGG GCACGATTCA CGACCCGGAA 
AGCCTTGACA AGGTATCGGA GGACATGTTG TGGGACCTTC TCACCGTCAA CGTGGGATCG 
GTTACCATGC TCACCCGCAA GATCCTGCCC CAGATGATTA GTCGTCGAAA GGGAGCAATT 
GTTAACCTCG GATCCTCCTC CGAACTCCAG CCCCATCCCA ATTTGACTGC TTATGCGGCT 
ACCAAGAAGT TCGTTACCCA TTTTACTAAA GGTTTAGAAT ATGAGGTGGC CGAACACAAT 
ATCCATGTGC AGTTGGTTAT GCCAGCCTTT GTGGCCACCA ATATGAATTC CTATTCCGAT 
AAAGTGAGGC AAGGAGGACT GCTTTTCCCC AACGCTTATT CCTATGCCCG GTCCGCAGTC 
TTTACACTGG GAAAGACGAG CGAGACCAAC GGTTTCTGGG TTCATGGATT ACAGTACGCC 
CTCATGAAGT TGTTTCCCAT GGAGATTCGT ACTTACTTTG TATACCAACT CTTTAAGCGA 
ATGAGAATCG AGGCCATGGA GCACAGACTG AAAAACCAAA AACTTTCTTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001097168.1
CDS	262..1212
Translation	MGLIYIVGSLSIAAFLYENLKSLFSIIKSVVEPFFRPNLPKTLAEKFGNWAVVTGATDGIGKEYARELARQGLNLVLVSRKEEKLIAVTNEIGSQYNVKIKWIVADFAKGREVYAHIEKELNGIEVGILVNNVGTIHDPESLDKVSEDMLWDLLTVNVGSVTMLTRKILPQMISRRKGAIVNLGSSSELQPHPNLTAYAATKKFVTHFTKGLEYEVAEHNIHVQLVMPAFVATNMNSYSDKVRQGGLLFPNAYSYARSAVFTLGKTSETNGFWVHGLQYALMKLFPMEIRTYFVYQLFKRMRIEAMEHRLKNQKLS

Target ORF information:

RefSeq Version	NM_001103698.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant B (CG31809), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001103698.2

ORF Insert Sequence:

ATGGGTCTTA TCTACATAGT GGGTTCTCTT AGCATCGCCG CTTTTCTCTA CGAAAACTTA 
AAGTCCTTGT TCAGCATTAT CAAGTCTGTT GTGGAACCGT TCTTCAGGCC GAATTTGCCA 
AAGACTTTGG CGGAAAAATT CGGAAATTGG GCAGTGGTGA CCGGTGCGAC CGATGGAATC 
GGAAAGGAAT ATGCCAGGGA GTTGGCTCGT CAGGGTCTTA ACCTGGTGCT CGTTTCGCGG 
AAAGAGGAAA AGCTGATTGC AGTCACCAAC GAGATTGGGA GCCAATATAA TGTGAAAATC 
AAGTGGATTG TTGCGGACTT TGCAAAGGGA CGCGAGGTGT ACGCTCATAT CGAAAAGGAA 
CTGAATGGAA TCGAAGTTGG AATTTTGGTC AACAATGTGG GCACGATTCA CGACCCGGAA 
AGCCTTGACA AGGTATCGGA GGACATGTTG TGGGACCTTC TCACCGTCAA CGTGGGATCG 
GTTACCATGC TCACCCGCAA GATCCTGCCC CAGATGATTA GTCGTCGAAA GGGAGCAATT 
GTTAACCTCG GATCCTCCTC CGAACTCCAG CCCCATCCCA ATTTGACTGC TTATGCGGCT 
ACCAAGAAGT TCGTTACCCA TTTTACTAAA GGTTTAGAAT ATGAGGTGGC CGAACACAAT 
ATCCATGTGC AGTTGGTTAT GCCAGCCTTT GTGGCCACCA ATATGAATTC CTATTCCGAT 
AAAGTGAGGC AAGGAGGACT GCTTTTCCCC AACGCTTATT CCTATGCCCG GTCCGCAGTC 
TTTACACTGG GAAAGACGAG CGAGACCAAC GGTTTCTGGG TTCATGGATT ACAGTACGCC 
CTCATGAAGT TGTTTCCCAT GGAGATTCGT ACTTACTTTG TATACCAACT CTTTAAGCGA 
ATGAGAATCG AGGCCATGGA GCACAGACTG AAAAACCAAA AACTTTCTTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG31809 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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