snrnp200 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	snrnp200
Entrez Gene ID	799690
Full Name	small nuclear ribonucleoprotein 200 (U5)
Synonyms	fb63a09,si:ch211-251j10.5,wu:fb63a09
General protein information	Preferred Names small nuclear ribonucleoprotein 200 (U5) Names U5 small nuclear ribonucleoprotein 200 kDa helicase activating signal cointegrator 1 complex subunit 3-like 1
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001123257.1	NP_001116729.1	U5 small nuclear ribonucleoprotein 200 kDa helicase

Pathways from BioSystems

Homologies

Schizosaccharomyces pombe (fission yeast)	brr2	NP_593346.1
Canis lupus familiaris (dog)	SNRNP200	XP_532949.2
Bos taurus (cattle)	SNRNP200	NP_001193092.1
Caenorhabditis elegans (roundworm)	snrp-200	NP_496710.1
Kluyveromyces lactis	KLLA0C17798g	XP_452995.1
Arabidopsis thaliana (thale cress)	AT2G42270	NP_181756.1
Pan troglodytes (chimpanzee)	SNRNP200	XP_001147672.1
Saccharomyces cerevisiae (baker's yeast)	BRR2	NP_011099.1
Eremothecium gossypii	AGOS_AGR113W	NP_986779.1
Neurospora crassa	NCU02685	XP_965458.1
Xenopus tropicalis (tropical clawed frog)	snrnp200	XP_002932581.2
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP001519	XP_321605.3
Magnaporthe oryzae (rice blast fungus)	MGG_15536	XP_003713506.1
Homo sapiens (human)	SNRNP200	NP_054733.2
	SNRNP200	XP_001098299.2
Mus musculus (house mouse)	Snrnp200	NP_796188.2
Rattus norvegicus (Norway rat)	Snrnp200	NP_001032855.2
Danio rerio (zebrafish)	snrnp200	NP_001116729.1
Drosophila melanogaster (fruit fly)	l(3)72Ab	NP_648818.3
Arabidopsis thaliana (thale cress)	emb1507	NP_001185050.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

Knocking Down Snrnp200 Initiates Demorphogenesis of Rod Photoreceptors in Zebrafish.
Liu Y, Chen X, Qin B, Zhao K, Zhao Q, Staley JP, Zhao C
Journal of ophthalmology2015816329(2015)

PRPF4 mutations cause autosomal dominant retinitis pigmentosa.
Chen X, Liu Y, Sheng X, Tam PO, Zhao K, Chen X, Rong W, Liu Y, Liu X, Pan X, Chen LJ, Zhao Q, Vollrath D, Pang CP, Zhao C
Human molecular genetics23(11)2926-39(2014 Jun)

Molecular characterization of the zebrafish P2X receptor subunit gene family.
Kucenas S, Li Z, Cox JA, Egan TM, Voigt MM
Neuroscience121(4)935-45(2003)

Identification of nodal signaling targets by array analysis of induced complex probes.
Dickmeis T, Aanstad P, Clark M, Fischer N, Herwig R, Mourrain P, Blader P, Rosa F, Lehrach H, Str?hle U
Developmental dynamics : an official publication of the American Association of Anatomists222(4)571-80(2001 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following snrnp200 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the snrnp200 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa02095	NM_001123257.1 Latest version!	Danio rerio small nuclear ribonucleoprotein 200 (U5) (snrnp200), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	30	$1161.30 $1659.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

snrnp200 ( NM_001123257.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001116729.1 Danio rerio small nuclear ribonucleoprotein 200 (U5) (snrnp200), mRNA.

Price & Availability↑

CloneID	ODa02095
Clone ID Related Accession (Same CDS sequence)	NM_001123257.1
Accession Version	NM_001123257.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 6405bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-06-26
Organism	Danio rerio(zebrafish)
Product	U5 small nuclear ribonucleoprotein 200 kDa helicase
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CR376723.15 and BX640472.24. On Apr 11, 2008 this sequence version replaced XM_703112.2. ##Evidence-Data-START## CDS exon combination :: GDQH01000036.1, GFIL01039138.1 [ECO:0000331] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGGCGGATG TTACTGCGCG TAGTTTGCAG TATGAATACA AAGCGAACTC TAACTTGGTG 
TTGCAAGCAG ACAGATCTCT GATCGACCGA ACACGCAGAG ATGAGCCCAC CGGAGAGGTG 
CTGTCTCTGG TCGGAAAACT GGAGGGGACC AAAATGGGAG ACAGAAGCCA GAGAACCAAA 
CCTCAGATGC TGGAGGAGAG GAGAGCAAAG AGGAGAAAGA GAGACGAGGA CAGACATGAC 
ATCAACAAGA TGAAGGGCTT CACACTGTTG TCTGAGGGCA TTGATGAGAT GGTGGGCATT 
GTGTACAAAC CTAAGACCAA AGAGACCAGA GAAACATATG AAATCCTGCT CAGCTTCATT 
CAGGCCGCTC TTGGAGATCA GCCAAGGGAT ATCCTGTGTG GAGCAGCAGA CGAGGTGTTG 
GCTGTGCTGA AAAATGACAA GATGAGAGAC AAAGAGAGGA GGAGGGAGGT GGAGCAGCTG 
TTGGGGCCTA CAGATGACAC ACGTTACCAT GTCCTGGTCA ACCTGGGAAA GAAGATCTCT 
GACTATGGAG GAGACAAAGA GCTACAGAAT ATGGATGACA ACATTGATGA AACCTATGGA 
GTCAATGTGC AGTTTGAGTC CGATGAGGAG GAGGGTGATG AGGACCAGTA TGGAGAGGTT 
CGGGATGAAG GCTCTGATGA CAGTGAGGGA GAAGAGGCAG ATGAAAGCAG CACACTGACT 
GCAAATCTGG GAAACACAGG AGATGTAATG ATGACCAAAA AGAAGGATCT TCACCCTCGA 
GACATCGATG CCTTCTGGCT TCAGCGACAG CTCAGCCGCT TCTACAACGA TGCCATCGTG 
TCCCAGAAAA AAGCAGACGA GGTCTTGGAG ATCCTTAAGA CTGCCAGTGA TGACAGAGAG 
TGTGAGAACC AGTTGGTGCT GCTTTTAGGC TTCAACACAT TCGACTTCAT CAAGGTCCTG 
CGCCAGCACA GGCGGATGAT CCTGTACTGC ACCATGCTGG CCAGTGCTCA AAGTGAAGCA 
GAGAAGGAGA AGATCATTAA TAAAATGGAG GCCGATCAGG ATCTTTCCAA AGTTCTCTAC 
CAGCTGCAAG AGACTGAAAA AGAGGACATC ATCAGGGAGG AGAGATCTCG CAGGGAGAGA 
ATGAGAAAAT CTCGTGTGGA TGATCTGGAG TCTATGGACA TTGATCATGG CGAGTCTGTG 
TCCTCAAGGC AGCTATTAGA CCTGGAAGAT CTGACCTTCA CTCAAGGTAG TCACTTCATG 
GCCAACAAGC GCTGCCAGCT GCCTGACGGC TCCTTCCGCA AACAGAGAAA GGGCTATGAG 
GAGGTTCATG TGCCTGCACT CAAACCCAAA CCCTTTGGTG ATGAAGAGAC ATTGGTGGGT 
ATTGAGAAAC TGCCCAAGTA TGCTCAAGCT GGATTTGAAG GATTTAAATC CTTGAATCGC 
ATACAGAGTA AACTCTTCAA AACCACTATG GAGACTGATG AGAATCTTCT GGTTTGCGCT 
CCAACGGGTG CTGGTAAAAC TAATGTTGCT CTTATGGCTA TGCTCAGAGA GATCGGAAAG 
CACATTAACA TGGATGGCAC CATCAATGTT GCAGATTTTA AGATCATTTA CATCGCTCCT 
ATGCGCTCAC TGGTACAGGA GATGGTGGGC AGCTTTGGCA AGCGCTTGGC TAGTTATGGC 
ATCATTGTTT CTGAGCTGAC CGGAGACCAT CAGCTGTGCA AGGAGGAAAT AAACGCCACT 
CAGATCATCG TGTGCACGCC AGAGAAATGG GACATCATTA CAAGGAAAGG AGGAGAACGA 
ACTTATACAC AGCTTGTGCG CCTTATCATT ATTGATGAGA TCCACTTGCT GCATGATGAC 
CGCGGCCCAG TCCTGGAGTC ACTGATTGCT CGAACCATCC GTAACGTGGA GCTGACGCAG 
GAAGACGTGA GGCTTATCGG CCTTAGCGCC ACGCTGCCTA ACTATGAGGA TGTGGCAACC 
TGCCTTCGTG TGGATCCATC AAAGGGACTT TTTTACTTCG ACAACAGTTT CCGACCTGTG 
CCTCTGGAAC AAACCTATGT GGGAATTACA GAGAAAAAGG CCATCAAACG CTTTCAGATC 
ATGAATGAAA TCGTCTATGA GAAGATCATG GAGCATGCTG GAAAAAATCA GGTGTTGGTG 
TTTGTGCACT CGAGAAAGGA GACCGGGAAG ACAGCTCGAG CAATCAGGGA CATGTGTTTG 
GAGAAGGACA CTCTGGGGTT ATTCTTGAGG GAGGGTTCAG CCTCCACTGA GGTTCTGAGG 
ACTGAGGCAG AGCAGTGCAA GAACTTGGAG CTGAAGGATC TTCTGCCTTA TGGTTTTGCT 
ATTCACCATG CCGGAATGAC CAGAGTGGAC AGAACGCTGG TAGAAGATTT GTTTGCTGAC 
CGTCACATTC AGGTGCTGGT CTCCACAGCC ACTCTGGCCT GGGGTGTGAA CTTACCAGCT 
CACACTGTCA TAATCAAAGG CACACAGGTT TACAGCCCAG AGAAAGGCAG ATGGACGGAG 
TTGGGAGCAC TGGACATCCT ACAGATGTTG GGTCGTGCTG GCAGACCGCA GTATGACTCT 
AAAGGAGAGG GTATTCTTAT CACTTCTCAT GGAGAGCTGC AGTATTACCT GTCCCTGCTC 
AATCAGCAGC TGCCCATCGA AAGCCAGATG GTGGGAAAAC TAGCTGACAT GCTGAATGCA 
GAGATTGTGT TGGGCAACGT GCAGAATGCC AAGGATGCTG TAAATTGGCT GGGATACACA 
TACCTGTATG TGCGCATGCT GCGTAACCCC ACACTATACG GCGTGTCCCA TGACGACCGC 
AGCATAGACC CCCTGCTGGA GCGTCGCAGG ATGGACCTGG TGCACACGGC AGCTACCGTC 
CTGGAGAAGA ACAACCTGGT CAAATACGAC AAGAGATCTG GCAGCTTTCA GGTGACAGAC 
CTGGGGCGCA TCGCCAGTCA TTTCTACATC ACCCATGAGT CCATAATGAC TTACAACCAG 
CTGCTAAAGC CCACACTGAG TGAGATCGAG CTCTTCAGGG TGTTCTCGCT TTCATCTGAG 
TTTAGGAACA TTACTGTCAG AGAGGAAGAA AAACTCGAGC TTCAGAAACT GCTCGAGCGA 
GTCCCTATTC CAGTGAAGGA AAGCATTGAA GAACCCAGTG CAAAGATTAA CGTGCTGCTG 
CAGGCATATA TCTCTCAGCT CAAACTGGAG GGCTTTGCTT TAATGGCTGA CATGGTCTAT 
GTGACGCAGA GTGCTGGCAG GCTGATGAGG GCTATCTTTG AGATTGTTTT GAGCAGAGGC 
TGGGCCCAGC TTACCGACAA GACTTTAAAC CTCTGCAAGA TGATTGACAA AAGGATGTGG 
CAGTCAATGT CTCCGTTGCG TCAGTTCCGC AAGCTTCCCG AAGAAGTCAT CAAGAAGATT 
GAGAAGAAAA ACTTCCCCTT TGAGCGTCTC TATGACCTGA ACCACAATGA AATCGGTGAG 
TTGATCCGCA TGCCAAAGAT GGGGAAGACC ATTCACAAGT ACGTCCATCA GTTCCCTAAA 
CTGGACCTGG CAGTTCATCT GCAGCCCATC ACACGCTCCA CTCTGAAAGT GGAGCTCACA 
ATCACACCCG ATTTCCAGTG GGATGACAAG ATACACGGCT CATCGGAAGC CTTCTGGATC 
TTGGTGGAGG ATGTAGACAG TGAGGTCGTC CTTCATCACG AGTACTTCCT CCTGAAGGCC 
AAGTACGCTC AAGATGAACA TCTTGTGACT TTCTTTGTAC CTGTGTTTGA GCCACTGCCA 
CCACAGTATT TCATTCGCAT AGCTTCAGAC CGCTGGCTTT CATGTGAAAC ACAGCTGCCT 
GTTTCCTTCC GTCACCTGAT CCTGCCGGAG AAATATCCTC CTCCCACTGA GCTGCTGGAC 
CTGCAGCCTT TACCTGTGTC TGCTCTGAGA AACGGAGCCT TCGAGAGCCT TTACCAGAAT 
TTCCCCTTTT TCAATCCAAT CCAGACTCAA GTGTTCAATG CTGTGTACAA CAGCGATGAC 
AATGTCTTTG TTGGTGCTCC AACGGGTAGC GGGAAGACCA TCTGTGCAGA GTTTGCCATT 
CTTAGGATGC TGCTCCACAA CGCAGAGGGT CGCTGTGTCT ACATCACACC TATGGAGGCT 
CTGGCTGAAC AGGTCTTCCT TGATTGGCAC CAGAAGTTCC AGGAAAATTT GAACAAGAAG 
GTTGTTTTAC TCACCGGTGA GACGAGCACT GACCTGAAGC TGCTGGGTAA AGGTGACATC 
ATTGTCAGTA CCCCAGACAA ATGGGACATT TTATCTCGCC GCTGGAAACA GAGGAAGAAC 
GTGCAAAACG TCAGCCTCTT CATTATAGAT GAGGTTCATC TCATTGGAGG AGACAACGGA 
CCTGTGTTGG AGGTGATTTG CTCCAGGATG AGGTACATCT CCTCTCAGAT TGAGCGGCCC 
ATTCGCATTG TGGCCCTCAG CTCCTCTTTG TCCAATGCTA AAGATGTGGC TCATTGGCTC 
GGCTGCAGCA CCACAGCCAC CTTCAACTTC CACCCCAATG TCAGGCCGGT TCCTCTGGAG 
CTTCACATCC AGGGCTTCAA CGTGAGTCAC ACACAGACTC GTCTGCTGTC CATGGCTAAA 
CCGGTGTATC ATGCCATAAT GAAACATTCC CCATCCAAGC CAGTGCTGGT GTTTGTGCCA 
TCAAGACGCC AGACACGTCT CACAGCTATT GATATCCTCA CCTTCTGTGC TGCAGATGTG 
GTTCCCCAGA GGTTCCTGCA CTCAACAGAG AAGGATCTGG TTCCATTTAT GGAGAATCTC 
TCTGATGTTA CACTGAAGGA GACCCTCTCT AACGGGGTGG GCTATCTTCA CGAGGGCCTT 
TCACCTACAG AGCGCAGGAT TGTGGAGCAT CTGTTCACTT CTGGTGCAAT TCAGGTGGTG 
GTTGCGTCTC GCTCTCTCTG CTGGGGCACT AACATTTCTG CCCACCTGGT GATTGTCATG 
GACACACAGT ACTACAATGG CAAAATTCAT GCATATGTGG ACTACCCAAT CTATGATGTG 
CTTCAGATGG TAGGAAAAGC AAACCGTCCT CTTCAGGACG ATGAGGGTCG CTGTGTCATC 
ATGTGTCAAG GGTCCAAAAA GGACTTCTTC AAGAAGTTCC TCTATGAACC TCTGCCTGTA 
GAATCTCACC TGGACCACTG CCTTCATGAC CATTTCAATG CTGAGATTGT TACTAAGACG 
GTGGAAAACA AACAGGATGC TGTGGACTAC CTGACATGGA CCTTCCTGTA CCGCAGAATG 
ACCCAGAATC CCAACTACTA CAATCTGCAG GGTATGTCTC ATCGTCACCT GTCAGATCAT 
CTGTCTGAGC TGGTGGAAAA CACCTTGCAG GATCTGGAAC AATCCAAGTG CATCAGCATC 
GAGGATGAGA TGGACGTGGC ACCTCTGAAT CTGGGCATGA TCGCAGCCTA CTATTACATC 
AACTACACCA CTATTGAGCT GTTCAGTATG TCTCTGAATG CCAAGACAAA GGTGCGTGGC 
CTCATCGAGA TCATCTCCAA CGCTGCAGAG TATAAAAACA TTCCCATCAG GCACCACGAA 
GACACCCTGC TACGACAGCT GGCTCAGAAA GTCCCTCACA AACTGAACAA CCCTAAATTC 
AACGACCCTC ACGTCAAGAC CAACCTGCTG CTCCAGGCTC ACCTGTCCCG CATGCAGCTG 
AGTGCAGAGC TGCAGTCTGA CACCGAGGAG ATCCTCAGCA AGGCGGTGCG TCTGATCCAG 
GCGTGTGTGG ACGTGCTCTC CAGTAACGGC TGGTTGAGTC CTGCACTGGC TGCTATGGAG 
TTGGCACAGA TGGTCACGCA AGCCATGTGG TCCAAAGACT CGTACCTCAG ACAGCTGCCA 
CACTTCACCT CTGAACTCAT CAAGCGCTGC ACAGACAAGG GTGTGGAGAG TATCTTTGAT 
ATCATGGAGA TGGAGGATGA GGATCGCACT GGACTCCTTC AGCTCTCGGA TGTCCAGGTG 
GCAGATGTGG CTCGTTTCTG TAACCGATAC CCCAACATTG AGCTCTCGTA TGAAGTGGTT 
GACAAAGACG ACATCAAGAG TGGGAGTCCA GTGGTGGTGC AGGTGCAGCT GGAGAGAGAA 
GAGGAGGTCA CAGGCCCCGT CATCGCCCCT CTCTTCCCTC AGAAACGTGA AGAAGGCTGG 
TGGGTCGTAA TCGGTGACCC CAAATCAAAC AGTTTGATCT CAATCAAGAG GTTAACTCTG 
CAGCAGAAGG CCAAGGTGAA GCTGGACTTT GTGGCTCCTG TGGTCGGTGT GCACAACTAC 
ACCCTGTACT TCATGAGTGA CGCTTACATG GGCTGCGATC AGGAGTACAA GTTCAGCACA 
GAAGTGAAGG AGGCTGACAG TGAAGGAGAC AGTGACAGTG ATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001116729.1
CDS	1..6405
Translation	MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTKMGDRSQRTKPQMLEERRAKRRKRDEDRHDINKMKGFTLLSEGIDEMVGIVYKPKTKETRETYEILLSFIQAALGDQPRDILCGAADEVLAVLKNDKMRDKERRREVEQLLGPTDDTRYHVLVNLGKKISDYGGDKELQNMDDNIDETYGVNVQFESDEEEGDEDQYGEVRDEGSDDSEGEEADESSTLTANLGNTGDVMMTKKKDLHPRDIDAFWLQRQLSRFYNDAIVSQKKADEVLEILKTASDDRECENQLVLLLGFNTFDFIKVLRQHRRMILYCTMLASAQSEAEKEKIINKMEADQDLSKVLYQLQETEKEDIIREERSRRERMRKSRVDDLESMDIDHGESVSSRQLLDLEDLTFTQGSHFMANKRCQLPDGSFRKQRKGYEEVHVPALKPKPFGDEETLVGIEKLPKYAQAGFEGFKSLNRIQSKLFKTTMETDENLLVCAPTGAGKTNVALMAMLREIGKHINMDGTINVADFKIIYIAPMRSLVQEMVGSFGKRLASYGIIVSELTGDHQLCKEEINATQIIVCTPEKWDIITRKGGERTYTQLVRLIIIDEIHLLHDDRGPVLESLIARTIRNVELTQEDVRLIGLSATLPNYEDVATCLRVDPSKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDSKGEGILITSHGELQYYLSLLNQQLPIESQMVGKLADMLNAEIVLGNVQNAKDAVNWLGYTYLYVRMLRNPTLYGVSHDDRSIDPLLERRRMDLVHTAATVLEKNNLVKYDKRSGSFQVTDLGRIASHFYITHESIMTYNQLLKPTLSEIELFRVFSLSSEFRNITVREEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAYISQLKLEGFALMADMVYVTQSAGRLMRAIFEIVLSRGWAQLTDKTLNLCKMIDKRMWQSMSPLRQFRKLPEEVIKKIEKKNFPFERLYDLNHNEIGELIRMPKMGKTIHKYVHQFPKLDLAVHLQPITRSTLKVELTITPDFQWDDKIHGSSEAFWILVEDVDSEVVLHHEYFLLKAKYAQDEHLVTFFVPVFEPLPPQYFIRIASDRWLSCETQLPVSFRHLILPEKYPPPTELLDLQPLPVSALRNGAFESLYQNFPFFNPIQTQVFNAVYNSDDNVFVGAPTGSGKTICAEFAILRMLLHNAEGRCVYITPMEALAEQVFLDWHQKFQENLNKKVVLLTGETSTDLKLLGKGDIIVSTPDKWDILSRRWKQRKNVQNVSLFIIDEVHLIGGDNGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDVAHWLGCSTTATFNFHPNVRPVPLELHIQGFNVSHTQTRLLSMAKPVYHAIMKHSPSKPVLVFVPSRRQTRLTAIDILTFCAADVVPQRFLHSTEKDLVPFMENLSDVTLKETLSNGVGYLHEGLSPTERRIVEHLFTSGAIQVVVASRSLCWGTNISAHLVIVMDTQYYNGKIHAYVDYPIYDVLQMVGKANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCLHDHFNAEIVTKTVENKQDAVDYLTWTFLYRRMTQNPNYYNLQGMSHRHLSDHLSELVENTLQDLEQSKCISIEDEMDVAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYKNIPIRHHEDTLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAVRLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLRQLPHFTSELIKRCTDKGVESIFDIMEMEDEDRTGLLQLSDVQVADVARFCNRYPNIELSYEVVDKDDIKSGSPVVVQVQLEREEEVTGPVIAPLFPQKREEGWWVVIGDPKSNSLISIKRLTLQQKAKVKLDFVAPVVGVHNYTLYFMSDAYMGCDQEYKFSTEVKEADSEGDSDSD

Target ORF information:

RefSeq Version	NM_001123257.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio small nuclear ribonucleoprotein 200 (U5) (snrnp200), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001123257.1

ORF Insert Sequence:

ATGGCGGATG TTACTGCGCG TAGTTTGCAG TATGAATACA AAGCGAACTC TAACTTGGTG 
TTGCAAGCAG ACAGATCTCT GATCGACCGA ACACGCAGAG ATGAGCCCAC CGGAGAGGTG 
CTGTCTCTGG TCGGAAAACT GGAGGGGACC AAAATGGGAG ACAGAAGCCA GAGAACCAAA 
CCTCAGATGC TGGAGGAGAG GAGAGCAAAG AGGAGAAAGA GAGACGAGGA CAGACATGAC 
ATCAACAAGA TGAAGGGCTT CACACTGTTG TCTGAGGGCA TTGATGAGAT GGTGGGCATT 
GTGTACAAAC CTAAGACCAA AGAGACCAGA GAAACATATG AAATCCTGCT CAGCTTCATT 
CAGGCCGCTC TTGGAGATCA GCCAAGGGAT ATCCTGTGTG GAGCAGCAGA CGAGGTGTTG 
GCTGTGCTGA AAAATGACAA GATGAGAGAC AAAGAGAGGA GGAGGGAGGT GGAGCAGCTG 
TTGGGGCCTA CAGATGACAC ACGTTACCAT GTCCTGGTCA ACCTGGGAAA GAAGATCTCT 
GACTATGGAG GAGACAAAGA GCTACAGAAT ATGGATGACA ACATTGATGA AACCTATGGA 
GTCAATGTGC AGTTTGAGTC CGATGAGGAG GAGGGTGATG AGGACCAGTA TGGAGAGGTT 
CGGGATGAAG GCTCTGATGA CAGTGAGGGA GAAGAGGCAG ATGAAAGCAG CACACTGACT 
GCAAATCTGG GAAACACAGG AGATGTAATG ATGACCAAAA AGAAGGATCT TCACCCTCGA 
GACATCGATG CCTTCTGGCT TCAGCGACAG CTCAGCCGCT TCTACAACGA TGCCATCGTG 
TCCCAGAAAA AAGCAGACGA GGTCTTGGAG ATCCTTAAGA CTGCCAGTGA TGACAGAGAG 
TGTGAGAACC AGTTGGTGCT GCTTTTAGGC TTCAACACAT TCGACTTCAT CAAGGTCCTG 
CGCCAGCACA GGCGGATGAT CCTGTACTGC ACCATGCTGG CCAGTGCTCA AAGTGAAGCA 
GAGAAGGAGA AGATCATTAA TAAAATGGAG GCCGATCAGG ATCTTTCCAA AGTTCTCTAC 
CAGCTGCAAG AGACTGAAAA AGAGGACATC ATCAGGGAGG AGAGATCTCG CAGGGAGAGA 
ATGAGAAAAT CTCGTGTGGA TGATCTGGAG TCTATGGACA TTGATCATGG CGAGTCTGTG 
TCCTCAAGGC AGCTATTAGA CCTGGAAGAT CTGACCTTCA CTCAAGGTAG TCACTTCATG 
GCCAACAAGC GCTGCCAGCT GCCTGACGGC TCCTTCCGCA AACAGAGAAA GGGCTATGAG 
GAGGTTCATG TGCCTGCACT CAAACCCAAA CCCTTTGGTG ATGAAGAGAC ATTGGTGGGT 
ATTGAGAAAC TGCCCAAGTA TGCTCAAGCT GGATTTGAAG GATTTAAATC CTTGAATCGC 
ATACAGAGTA AACTCTTCAA AACCACTATG GAGACTGATG AGAATCTTCT GGTTTGCGCT 
CCAACGGGTG CTGGTAAAAC TAATGTTGCT CTTATGGCTA TGCTCAGAGA GATCGGAAAG 
CACATTAACA TGGATGGCAC CATCAATGTT GCAGATTTTA AGATCATTTA CATCGCTCCT 
ATGCGCTCAC TGGTACAGGA GATGGTGGGC AGCTTTGGCA AGCGCTTGGC TAGTTATGGC 
ATCATTGTTT CTGAGCTGAC CGGAGACCAT CAGCTGTGCA AGGAGGAAAT AAACGCCACT 
CAGATCATCG TGTGCACGCC AGAGAAATGG GACATCATTA CAAGGAAAGG AGGAGAACGA 
ACTTATACAC AGCTTGTGCG CCTTATCATT ATTGATGAGA TCCACTTGCT GCATGATGAC 
CGCGGCCCAG TCCTGGAGTC ACTGATTGCT CGAACCATCC GTAACGTGGA GCTGACGCAG 
GAAGACGTGA GGCTTATCGG CCTTAGCGCC ACGCTGCCTA ACTATGAGGA TGTGGCAACC 
TGCCTTCGTG TGGATCCATC AAAGGGACTT TTTTACTTCG ACAACAGTTT CCGACCTGTG 
CCTCTGGAAC AAACCTATGT GGGAATTACA GAGAAAAAGG CCATCAAACG CTTTCAGATC 
ATGAATGAAA TCGTCTATGA GAAGATCATG GAGCATGCTG GAAAAAATCA GGTGTTGGTG 
TTTGTGCACT CGAGAAAGGA GACCGGGAAG ACAGCTCGAG CAATCAGGGA CATGTGTTTG 
GAGAAGGACA CTCTGGGGTT ATTCTTGAGG GAGGGTTCAG CCTCCACTGA GGTTCTGAGG 
ACTGAGGCAG AGCAGTGCAA GAACTTGGAG CTGAAGGATC TTCTGCCTTA TGGTTTTGCT 
ATTCACCATG CCGGAATGAC CAGAGTGGAC AGAACGCTGG TAGAAGATTT GTTTGCTGAC 
CGTCACATTC AGGTGCTGGT CTCCACAGCC ACTCTGGCCT GGGGTGTGAA CTTACCAGCT 
CACACTGTCA TAATCAAAGG CACACAGGTT TACAGCCCAG AGAAAGGCAG ATGGACGGAG 
TTGGGAGCAC TGGACATCCT ACAGATGTTG GGTCGTGCTG GCAGACCGCA GTATGACTCT 
AAAGGAGAGG GTATTCTTAT CACTTCTCAT GGAGAGCTGC AGTATTACCT GTCCCTGCTC 
AATCAGCAGC TGCCCATCGA AAGCCAGATG GTGGGAAAAC TAGCTGACAT GCTGAATGCA 
GAGATTGTGT TGGGCAACGT GCAGAATGCC AAGGATGCTG TAAATTGGCT GGGATACACA 
TACCTGTATG TGCGCATGCT GCGTAACCCC ACACTATACG GCGTGTCCCA TGACGACCGC 
AGCATAGACC CCCTGCTGGA GCGTCGCAGG ATGGACCTGG TGCACACGGC AGCTACCGTC 
CTGGAGAAGA ACAACCTGGT CAAATACGAC AAGAGATCTG GCAGCTTTCA GGTGACAGAC 
CTGGGGCGCA TCGCCAGTCA TTTCTACATC ACCCATGAGT CCATAATGAC TTACAACCAG 
CTGCTAAAGC CCACACTGAG TGAGATCGAG CTCTTCAGGG TGTTCTCGCT TTCATCTGAG 
TTTAGGAACA TTACTGTCAG AGAGGAAGAA AAACTCGAGC TTCAGAAACT GCTCGAGCGA 
GTCCCTATTC CAGTGAAGGA AAGCATTGAA GAACCCAGTG CAAAGATTAA CGTGCTGCTG 
CAGGCATATA TCTCTCAGCT CAAACTGGAG GGCTTTGCTT TAATGGCTGA CATGGTCTAT 
GTGACGCAGA GTGCTGGCAG GCTGATGAGG GCTATCTTTG AGATTGTTTT GAGCAGAGGC 
TGGGCCCAGC TTACCGACAA GACTTTAAAC CTCTGCAAGA TGATTGACAA AAGGATGTGG 
CAGTCAATGT CTCCGTTGCG TCAGTTCCGC AAGCTTCCCG AAGAAGTCAT CAAGAAGATT 
GAGAAGAAAA ACTTCCCCTT TGAGCGTCTC TATGACCTGA ACCACAATGA AATCGGTGAG 
TTGATCCGCA TGCCAAAGAT GGGGAAGACC ATTCACAAGT ACGTCCATCA GTTCCCTAAA 
CTGGACCTGG CAGTTCATCT GCAGCCCATC ACACGCTCCA CTCTGAAAGT GGAGCTCACA 
ATCACACCCG ATTTCCAGTG GGATGACAAG ATACACGGCT CATCGGAAGC CTTCTGGATC 
TTGGTGGAGG ATGTAGACAG TGAGGTCGTC CTTCATCACG AGTACTTCCT CCTGAAGGCC 
AAGTACGCTC AAGATGAACA TCTTGTGACT TTCTTTGTAC CTGTGTTTGA GCCACTGCCA 
CCACAGTATT TCATTCGCAT AGCTTCAGAC CGCTGGCTTT CATGTGAAAC ACAGCTGCCT 
GTTTCCTTCC GTCACCTGAT CCTGCCGGAG AAATATCCTC CTCCCACTGA GCTGCTGGAC 
CTGCAGCCTT TACCTGTGTC TGCTCTGAGA AACGGAGCCT TCGAGAGCCT TTACCAGAAT 
TTCCCCTTTT TCAATCCAAT CCAGACTCAA GTGTTCAATG CTGTGTACAA CAGCGATGAC 
AATGTCTTTG TTGGTGCTCC AACGGGTAGC GGGAAGACCA TCTGTGCAGA GTTTGCCATT 
CTTAGGATGC TGCTCCACAA CGCAGAGGGT CGCTGTGTCT ACATCACACC TATGGAGGCT 
CTGGCTGAAC AGGTCTTCCT TGATTGGCAC CAGAAGTTCC AGGAAAATTT GAACAAGAAG 
GTTGTTTTAC TCACCGGTGA GACGAGCACT GACCTGAAGC TGCTGGGTAA AGGTGACATC 
ATTGTCAGTA CCCCAGACAA ATGGGACATT TTATCTCGCC GCTGGAAACA GAGGAAGAAC 
GTGCAAAACG TCAGCCTCTT CATTATAGAT GAGGTTCATC TCATTGGAGG AGACAACGGA 
CCTGTGTTGG AGGTGATTTG CTCCAGGATG AGGTACATCT CCTCTCAGAT TGAGCGGCCC 
ATTCGCATTG TGGCCCTCAG CTCCTCTTTG TCCAATGCTA AAGATGTGGC TCATTGGCTC 
GGCTGCAGCA CCACAGCCAC CTTCAACTTC CACCCCAATG TCAGGCCGGT TCCTCTGGAG 
CTTCACATCC AGGGCTTCAA CGTGAGTCAC ACACAGACTC GTCTGCTGTC CATGGCTAAA 
CCGGTGTATC ATGCCATAAT GAAACATTCC CCATCCAAGC CAGTGCTGGT GTTTGTGCCA 
TCAAGACGCC AGACACGTCT CACAGCTATT GATATCCTCA CCTTCTGTGC TGCAGATGTG 
GTTCCCCAGA GGTTCCTGCA CTCAACAGAG AAGGATCTGG TTCCATTTAT GGAGAATCTC 
TCTGATGTTA CACTGAAGGA GACCCTCTCT AACGGGGTGG GCTATCTTCA CGAGGGCCTT 
TCACCTACAG AGCGCAGGAT TGTGGAGCAT CTGTTCACTT CTGGTGCAAT TCAGGTGGTG 
GTTGCGTCTC GCTCTCTCTG CTGGGGCACT AACATTTCTG CCCACCTGGT GATTGTCATG 
GACACACAGT ACTACAATGG CAAAATTCAT GCATATGTGG ACTACCCAAT CTATGATGTG 
CTTCAGATGG TAGGAAAAGC AAACCGTCCT CTTCAGGACG ATGAGGGTCG CTGTGTCATC 
ATGTGTCAAG GGTCCAAAAA GGACTTCTTC AAGAAGTTCC TCTATGAACC TCTGCCTGTA 
GAATCTCACC TGGACCACTG CCTTCATGAC CATTTCAATG CTGAGATTGT TACTAAGACG 
GTGGAAAACA AACAGGATGC TGTGGACTAC CTGACATGGA CCTTCCTGTA CCGCAGAATG 
ACCCAGAATC CCAACTACTA CAATCTGCAG GGTATGTCTC ATCGTCACCT GTCAGATCAT 
CTGTCTGAGC TGGTGGAAAA CACCTTGCAG GATCTGGAAC AATCCAAGTG CATCAGCATC 
GAGGATGAGA TGGACGTGGC ACCTCTGAAT CTGGGCATGA TCGCAGCCTA CTATTACATC 
AACTACACCA CTATTGAGCT GTTCAGTATG TCTCTGAATG CCAAGACAAA GGTGCGTGGC 
CTCATCGAGA TCATCTCCAA CGCTGCAGAG TATAAAAACA TTCCCATCAG GCACCACGAA 
GACACCCTGC TACGACAGCT GGCTCAGAAA GTCCCTCACA AACTGAACAA CCCTAAATTC 
AACGACCCTC ACGTCAAGAC CAACCTGCTG CTCCAGGCTC ACCTGTCCCG CATGCAGCTG 
AGTGCAGAGC TGCAGTCTGA CACCGAGGAG ATCCTCAGCA AGGCGGTGCG TCTGATCCAG 
GCGTGTGTGG ACGTGCTCTC CAGTAACGGC TGGTTGAGTC CTGCACTGGC TGCTATGGAG 
TTGGCACAGA TGGTCACGCA AGCCATGTGG TCCAAAGACT CGTACCTCAG ACAGCTGCCA 
CACTTCACCT CTGAACTCAT CAAGCGCTGC ACAGACAAGG GTGTGGAGAG TATCTTTGAT 
ATCATGGAGA TGGAGGATGA GGATCGCACT GGACTCCTTC AGCTCTCGGA TGTCCAGGTG 
GCAGATGTGG CTCGTTTCTG TAACCGATAC CCCAACATTG AGCTCTCGTA TGAAGTGGTT 
GACAAAGACG ACATCAAGAG TGGGAGTCCA GTGGTGGTGC AGGTGCAGCT GGAGAGAGAA 
GAGGAGGTCA CAGGCCCCGT CATCGCCCCT CTCTTCCCTC AGAAACGTGA AGAAGGCTGG 
TGGGTCGTAA TCGGTGACCC CAAATCAAAC AGTTTGATCT CAATCAAGAG GTTAACTCTG 
CAGCAGAAGG CCAAGGTGAA GCTGGACTTT GTGGCTCCTG TGGTCGGTGT GCACAACTAC 
ACCCTGTACT TCATGAGTGA CGCTTACATG GGCTGCGATC AGGAGTACAA GTTCAGCACA 
GAAGTGAAGG AGGCTGACAG TGAAGGAGAC AGTGACAGTG ATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

Knocking Down Snrnp200 Initiates Demorphogenesis of Rod Photoreceptors in Zebrafish.
Journal of ophthalmology2015816329(2015)
Liu Y,Chen X,Qin B,Zhao K,Zhao Q,Staley JP,Zhao C

PRPF4 mutations cause autosomal dominant retinitis pigmentosa.
Human molecular genetics23(11)2926-39(2014 Jun)
Chen X,Liu Y,Sheng X,Tam PO,Zhao K,Chen X,Rong W,Liu Y,Liu X,Pan X,Chen LJ,Zhao Q,Vollrath D,Pang CP,Zhao C

Molecular characterization of the zebrafish P2X receptor subunit gene family.
Neuroscience121(4)935-45(2003)
Kucenas S,Li Z,Cox JA,Egan TM,Voigt MM

Identification of nodal signaling targets by array analysis of induced complex probes.
Developmental dynamics : an official publication of the American Association of Anatomists222(4)571-80(2001 Dec)
Dickmeis T,Aanstad P,Clark M,Fischer N,Herwig R,Mourrain P,Blader P,Rosa F,Lehrach H,Str?hle U

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snrnp200 cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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