gp1bb cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	gp1bb
Entrez Gene ID	798998
Full Name	glycoprotein Ib (platelet), beta polypeptide
Synonyms	si:dkey-285c2.8
General protein information	Preferred Names glycoprotein Ib (platelet), beta polypeptide Names platelet glycoprotein Ib beta chain
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_009303730.2	XP_009302005.1	platelet glycoprotein Ib beta chain isoform X1
NM_001144812.1	NP_001138284.1	platelet glycoprotein Ib beta chain precursor

Pathways from BioSystems

Homologies

Homo sapiens (human)	GP1BB	NP_000398.1
Canis lupus familiaris (dog)	GP1BB	XP_005636645.1
Xenopus tropicalis (tropical clawed frog)	gp1bb	XP_002931927.1
	LOC712129	XP_001105321.1
Danio rerio (zebrafish)	gp1bb	NP_001138284.1
Mus musculus (house mouse)	Gp1bb	NP_034457.1
Rattus norvegicus (Norway rat)	Gp1bb	NP_446382.1

Gene Ontology
Bibliography

Related articles in PubMed

Establishment of a congenital amegakaryocytic thrombocytopenia model and a thrombocyte-specific reporter line in zebrafish.
Lin Q, Zhang Y, Zhou R, Zheng Y, Zhao L, Huang M, Zhang X, Leung AYH, Zhang W, Zhang Y
Leukemia31(5)1206-1216(2017 May)

Sex differences in DNA methylation and expression in zebrafish brain: a test of an extended 'male sex drive' hypothesis.
Chatterjee A, Lagisz M, Rodger EJ, Zhen L, Stockwell PA, Duncan EJ, Horsfield JA, Jeyakani J, Mathavan S, Ozaki Y, Nakagawa S
Gene590(2)307-16(2016 Sep)

Single-Cell RNA-Sequencing Reveals a Continuous Spectrum of Differentiation in Hematopoietic Cells.
Macaulay IC, Svensson V, Labalette C, Ferreira L, Hamey F, Voet T, Teichmann SA, Cvejic A
Cell reports14(4)966-977(2016 Feb)

Evolution and Expression of Paxillin Genes in Teleost Fish.
Jacob AE, Turner CE, Amack JD
PloS one11(11)e0165266(2016)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following gp1bb gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the gp1bb cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa04141	NM_001144812.1 Latest version!	Danio rerio glycoprotein Ib platelet subunit beta (gp1bb), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
ODa47326	XM_009303730.2 Latest version!	Danio rerio glycoprotein Ib (platelet), beta polypeptide (gp1bb), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

gp1bb ( NM_001144812.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001138284.1 Danio rerio glycoprotein Ib platelet subunit beta (gp1bb), mRNA.

Price & Availability↑

CloneID	ODa04141
Clone ID Related Accession (Same CDS sequence)	NM_001144812.1
Accession Version	NM_001144812.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 624bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	platelet glycoprotein Ib beta chain precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CU469504.8. On Jan 25, 2009 this sequence version replaced XM_001334233.2. ##Evidence-Data-START## Transcript exon combination :: BC157386.1, GDQH01007231.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705 [ECO:0000348] ##Evidence-Data-END##

ATGAGGAGTG TTGTGCTGGT GTTTTTCCTC AGTGCGATGG CTGCAGTGGT TCAGGGCTCG 
TGTCCTCATG TGTGTTCGTG CTCTGCTGGT GTTGTGGACT GCAGTAATCG TGCTCTCACC 
ACCGCCACGC TACCCTCGTC CTTTCCAGCG TCCACCACTG AGCTCCTGCT AAATGAAAAC 
CACCTAACGG CTCTGCCCAC CGGCCTGCTG GACGCTCTGC CCGCCCTGCG CCGCGTCGCC 
CTGCACGGAA ACTCCTGGGC CTGCGACTGC GCCATTCTTT ACCTGAGGGG CTGGATGCTG 
AAACGTGGCA GCGACCCGTC TATGCGGAAC GTGTCGTGCA GTTCTCCTGC TCACCTGCGG 
GGGCGCCTGA TCGTGTATCT GCCGGAGCAG GAGCTGCTGG ACTCGTGTCG GTACTGGCTG 
TGTAATTTAG CTCTGGCGTC TCAGATCAGC CTGTTGGTCT TCATTGGCGT TCAGGCGCTC 
CTGTTGGCTT CCGTCATCTT CTTCCTACGC CGGTTTGAGC GGCTCACCGA GGAGGCACAG 
CGTACAGCAG CCGAGAGCTT CACGGCAGAG GAAAACGCGG ATCACAATAG CGAATACGTC 
ATGCTGAAGG ACAGGAGCAT GTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001138284.1
CDS	76..699
Translation	MRSVVLVFFLSAMAAVVQGSCPHVCSCSAGVVDCSNRALTTATLPSSFPASTTELLLNENHLTALPTGLLDALPALRRVALHGNSWACDCAILYLRGWMLKRGSDPSMRNVSCSSPAHLRGRLIVYLPEQELLDSCRYWLCNLALASQISLLVFIGVQALLLASVIFFLRRFERLTEEAQRTAAESFTAEENADHNSEYVMLKDRSM

Target ORF information:

RefSeq Version	NM_001144812.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio glycoprotein Ib platelet subunit beta (gp1bb), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001144812.1

ORF Insert Sequence:

ATGAGGAGTG TTGTGCTGGT GTTTTTCCTC AGTGCGATGG CTGCAGTGGT TCAGGGCTCG 
TGTCCTCATG TGTGTTCGTG CTCTGCTGGT GTTGTGGACT GCAGTAATCG TGCTCTCACC 
ACCGCCACGC TACCCTCGTC CTTTCCAGCG TCCACCACTG AGCTCCTGCT AAATGAAAAC 
CACCTAACGG CTCTGCCCAC CGGCCTGCTG GACGCTCTGC CCGCCCTGCG CCGCGTCGCC 
CTGCACGGAA ACTCCTGGGC CTGCGACTGC GCCATTCTTT ACCTGAGGGG CTGGATGCTG 
AAACGTGGCA GCGACCCGTC TATGCGGAAC GTGTCGTGCA GTTCTCCTGC TCACCTGCGG 
GGGCGCCTGA TCGTGTATCT GCCGGAGCAG GAGCTGCTGG ACTCGTGTCG GTACTGGCTG 
TGTAATTTAG CTCTGGCGTC TCAGATCAGC CTGTTGGTCT TCATTGGCGT TCAGGCGCTC 
CTGTTGGCTT CCGTCATCTT CTTCCTACGC CGGTTTGAGC GGCTCACCGA GGAGGCACAG 
CGTACAGCAG CCGAGAGCTT CACGGCAGAG GAAAACGCGG ATCACAATAG CGAATACGTC 
ATGCTGAAGG ACAGGAGCAT GTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

gp1bb ( XM_009303730.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_009302005.1 Danio rerio glycoprotein Ib (platelet), beta polypeptide (gp1bb), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa47326
Clone ID Related Accession (Same CDS sequence)	XM_009303730.2
Accession Version	XM_009303730.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 648bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	platelet glycoprotein Ib beta chain isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007119.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009303730.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTGTGTGT GTGTGTGTGC TGGTATGAGG AGTGTTGTGC TGGTGTTTTT CCTCAGTGCG 
ATGGCTGCAG TGGTTCAGGG CTCGTGTCCT CATGTGTGTT CGTGCTCTGC TGGTGTTGTG 
GACTGCAGTA ATCGTGCTCT CACCACCGCC ACGCTACCCT CGTCCTTTCC AGCGTCCACC 
ACTGAGCTCC TGCTAAATGA AAACCACCTA ACGGCTCTGC CCACCGGCCT GCTGGACGCT 
CTGCCCGCCC TGCGCCGCGT CGCCCTGCAC GGAAACTCCT GGGCCTGCGA CTGCGCCATT 
CTTTACCTGA GGGGCTGGAT GCTGAAACGT GGCAGCGACC CGTCTATGCG GAACGTGTCG 
TGCAGTTCTC CTGCTCACCT GCGGGGGCGC CTGATCGTGT ATCTGCCGGA GCAGGAGCTG 
CTGGACTCGT GTCGGTACTG GCTGTGTAAT TTAGCTCTGG CGTCTCAGAT CAGCCTGTTG 
GTCTTCATTG GCGTTCAGGC GCTCCTGTTG GCTTCCGTCA TCTTCTTCCT ACGCCGGTTT 
GAGCGGCTCA CCGAGGAGGC ACAGCGTACA GCAGCCGAGA GCTTCACGGC AGAGGAAAAC 
GCGGATCACA ATAGCGAATA CGTCATGCTG AAGGACAGGA GCATGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009302005.1
CDS	154..801
Translation	MCVCVCAGMRSVVLVFFLSAMAAVVQGSCPHVCSCSAGVVDCSNRALTTATLPSSFPASTTELLLNENHLTALPTGLLDALPALRRVALHGNSWACDCAILYLRGWMLKRGSDPSMRNVSCSSPAHLRGRLIVYLPEQELLDSCRYWLCNLALASQISLLVFIGVQALLLASVIFFLRRFERLTEEAQRTAAESFTAEENADHNSEYVMLKDRSM

Target ORF information:

RefSeq Version	XM_009303730.2
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio glycoprotein Ib (platelet), beta polypeptide (gp1bb), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009303730.2

ORF Insert Sequence:

ATGTGTGTGT GTGTGTGTGC TGGTATGAGG AGTGTTGTGC TGGTGTTTTT CCTCAGTGCG 
ATGGCTGCAG TGGTTCAGGG CTCGTGTCCT CATGTGTGTT CGTGCTCTGC TGGTGTTGTG 
GACTGCAGTA ATCGTGCTCT CACCACCGCC ACGCTACCCT CGTCCTTTCC AGCGTCCACC 
ACTGAGCTCC TGCTAAATGA AAACCACCTA ACGGCTCTGC CCACCGGCCT GCTGGACGCT 
CTGCCCGCCC TGCGCCGCGT CGCCCTGCAC GGAAACTCCT GGGCCTGCGA CTGCGCCATT 
CTTTACCTGA GGGGCTGGAT GCTGAAACGT GGCAGCGACC CGTCTATGCG GAACGTGTCG 
TGCAGTTCTC CTGCTCACCT GCGGGGGCGC CTGATCGTGT ATCTGCCGGA GCAGGAGCTG 
CTGGACTCGT GTCGGTACTG GCTGTGTAAT TTAGCTCTGG CGTCTCAGAT CAGCCTGTTG 
GTCTTCATTG GCGTTCAGGC GCTCCTGTTG GCTTCCGTCA TCTTCTTCCT ACGCCGGTTT 
GAGCGGCTCA CCGAGGAGGC ACAGCGTACA GCAGCCGAGA GCTTCACGGC AGAGGAAAAC 
GCGGATCACA ATAGCGAATA CGTCATGCTG AAGGACAGGA GCATGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Establishment of a congenital amegakaryocytic thrombocytopenia model and a thrombocyte-specific reporter line in zebrafish.
Leukemia31(5)1206-1216(2017 May)
Lin Q,Zhang Y,Zhou R,Zheng Y,Zhao L,Huang M,Zhang X,Leung AYH,Zhang W,Zhang Y

Sex differences in DNA methylation and expression in zebrafish brain: a test of an extended 'male sex drive' hypothesis.
Gene590(2)307-16(2016 Sep)
Chatterjee A,Lagisz M,Rodger EJ,Zhen L,Stockwell PA,Duncan EJ,Horsfield JA,Jeyakani J,Mathavan S,Ozaki Y,Nakagawa S

Single-Cell RNA-Sequencing Reveals a Continuous Spectrum of Differentiation in Hematopoietic Cells.
Cell reports14(4)966-977(2016 Feb)
Macaulay IC,Svensson V,Labalette C,Ferreira L,Hamey F,Voet T,Teichmann SA,Cvejic A

Evolution and Expression of Paxillin Genes in Teleost Fish.
PloS one11(11)e0165266(2016)
Jacob AE,Turner CE,Amack JD

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gp1bb cDNA ORF clone, Danio rerio(zebrafish)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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