LOC798290 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC798290
Entrez Gene ID	798290
Full Name	uncharacterized LOC798290
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001100061.2	NP_001093531.1	membrane-spanning 4-domains, subfamily A, member 17a.2
XM_017355104.1	XP_017210593.1	uncharacterized protein LOC798290 isoform X1
NM_001100061.1	NP_001093531.1	uncharacterized protein LOC798290
XM_017355104.2	XP_017210593.1	uncharacterized protein LOC798290 isoform X1

Pathways from BioSystems

Homologies

Danio rerio (zebrafish)	ms4a17a.8	NP_001119946.1
Danio rerio (zebrafish)	LOC100537622	XP_003198596.1
Danio rerio (zebrafish)	ms4a17a.1	NP_001017783.2
Danio rerio (zebrafish)	LOC798358	XP_001334361.1
Danio rerio (zebrafish)	LOC798827	XP_001339255.3
Danio rerio (zebrafish)	ms4a17a.5	NP_001004629.1
Danio rerio (zebrafish)	LOC798290	NP_001093531.1
Danio rerio (zebrafish)	ms4a17a.6	NP_001076481.1
Danio rerio (zebrafish)	ms4a17a.17	NP_001082925.1
Danio rerio (zebrafish)	ms4a17a.7	XP_005165009.1
Danio rerio (zebrafish)	ms4a17a.11	NP_001017670.1
Danio rerio (zebrafish)	ms4a17c.1	NP_001121751.1
Danio rerio (zebrafish)	ms4a17a.4	NP_001096108.2
Danio rerio (zebrafish)	LOC798679	XP_001339114.2
Danio rerio (zebrafish)	LOC100537382	XP_003200040.2
Danio rerio (zebrafish)	ms4a17a.9	NP_001013528.1
Danio rerio (zebrafish)	ms4a17a.16	XP_005165025.1
Danio rerio (zebrafish)	LOC101882189	XP_005172047.1

Gene Ontology
Bibliography

Related articles in PubMed

Identification of target genes downstream of semaphorin6A/PlexinA2 signaling in zebrafish.
Emerson SE, St Clair RM, Waldron AL, Bruno SR, Duong A, Driscoll HE, Ballif BA, McFarlane S, Ebert AM
Developmental dynamics : an official publication of the American Association of Anatomists246(7)539-549(2017 Jul)

Contrasted innate responses to two viruses in zebrafish: insights into the ancestral repertoire of vertebrate IFN-stimulated genes.
Briolat V, Jouneau L, Carvalho R, Palha N, Langevin C, Herbomel P, Schwartz O, Spaink HP, Levraud JP, Boudinot P
Journal of immunology (Baltimore, Md. : 1950)192(9)4328-41(2014 May)

Phylogenetic analysis of the MS4A and TMEM176 gene families.
Zuccolo J, Bau J, Childs SJ, Goss GG, Sensen CW, Deans JP
PloS one5(2)e9369(2010 Feb)

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T, Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL, Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P, Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH, Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW, Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW, Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U, Smailus DE, Schnerch A, Schein JE, Jones SJ, Marra MA,
Proceedings of the National Academy of Sciences of the United States of America99(26)16899-903(2002 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC798290 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC798290 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa09918	NM_001100061.2 Latest version!	Danio rerio membrane-spanning 4-domains, subfamily A, member 17a.2 (ms4a17a.2), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
ODa09918	XM_017355104.2 Latest version!	Danio rerio uncharacterized LOC798290 (LOC798290), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
View Old Accession Versions >>
ODa09918	NM_001100061.1	Danio rerio uncharacterized LOC798290 (LOC798290), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
ODa09918	XM_017355104.1	Danio rerio uncharacterized LOC798290 (LOC798290), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
Hide Old Accession Versions >>

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC798290 ( NM_001100061.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001093531.1 Danio rerio membrane-spanning 4-domains, subfamily A, member 17a.2 (ms4a17a.2), mRNA.

Price & Availability↑

CloneID	ODa09918
Clone ID Related Accession (Same CDS sequence)	NM_001100061.2 , XM_017355104.1 , NM_001100061.1 , XM_017355104.2
Accession Version	NM_001100061.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 744bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-03-21
Organism	Danio rerio(zebrafish)
Product	membrane-spanning 4-domains, subfamily A, member 17a.2
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CR762404.6. On Oct 3, 2018 this sequence version replaced NM_001100061.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BC163051.1, EH434885.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGGCGACTG TCAGAGCCAT GAATCCTTCA ACGATTGTCA TCCAGCTTCA GCCACTGACA 
CAAACAGCAA CTGGGACCAG TTCTTCTGTG CCTGTGCGCA TACAGCATGT AGCAGGAGTT 
TCACCTCGTC AAGGAATTCA GGCCTTTCTT AAAGGCCAAC CGAAAGCCCT CGGGACTGTC 
CAGATAATGA TCGGTGTGTT GACCTTCCTG TTGGGAATCT TGTGTACAAT TTATGGAAAT 
TATATCTTCT TCTTCACTGG TGTTTCTTAC GTGGCATCTC TGATATACAT TACTACAGGC 
TTGCTCTCCA TTGCTGCTGA AAACAAAATC AATTCACCAT CTGCTTTATG TCTGGTGAGA 
GCTTCCCTCG GGATGAACAT TTTCAGTGCT ATAGCTGCGG TCTTTTCCAT TATTATGCTT 
TCACTGGGTT TGGCTGTTGG ACCCACCAAC CGTTACTGCA GAGACTTTTA TTGTTATAAT 
TATACGACTC TCCTCTCAGG AATCAATGGT GTGTTGCTGG CGTTCGCCAT CCTTGAGTTC 
TTCATCTCCA TCTGCCTATC TGTGTTTGCC TGTAAAGTCA CCTGCTGCTG TAAGCCTAAG 
ATTCATGTGA GCAGCAACCC TTTAATTCAA CGCCCTCCTG CAGAAACGCC CCAACAGTAC 
AGTCAATGTC CTCAAGAAGT CCCTGAACCA TGCTTTCAAC ATCCTCCTGC AGAAACTCCC 
CCAGCGTACA CTGAAGGCAA ATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001093531.1
CDS	107..850
Translation	MATVRAMNPSTIVIQLQPLTQTATGTSSSVPVRIQHVAGVSPRQGIQAFLKGQPKALGTVQIMIGVLTFLLGILCTIYGNYIFFFTGVSYVASLIYITTGLLSIAAENKINSPSALCLVRASLGMNIFSAIAAVFSIIMLSLGLAVGPTNRYCRDFYCYNYTTLLSGINGVLLAFAILEFFISICLSVFACKVTCCCKPKIHVSSNPLIQRPPAETPQQYSQCPQEVPEPCFQHPPAETPPAYTEGK

Target ORF information:

RefSeq Version	NM_001100061.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio membrane-spanning 4-domains, subfamily A, member 17a.2 (ms4a17a.2), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001100061.2

ORF Insert Sequence:

ATGGCGACTG TCAGAGCCAT GAATCCTTCA ACGATTGTCA TCCAGCTTCA GCCACTGACA 
CAAACAGCAA CTGGGACCAG TTCTTCTGTG CCTGTGCGCA TACAGCATGT AGCAGGAGTT 
TCACCTCGTC AAGGAATTCA GGCCTTTCTT AAAGGCCAAC CGAAAGCCCT CGGGACTGTC 
CAGATAATGA TCGGTGTGTT GACCTTCCTG TTGGGAATCT TGTGTACAAT TTATGGAAAT 
TATATCTTCT TCTTCACTGG TGTTTCTTAC GTGGCATCTC TGATATACAT TACTACAGGC 
TTGCTCTCCA TTGCTGCTGA AAACAAAATC AATTCACCAT CTGCTTTATG TCTGGTGAGA 
GCTTCCCTCG GGATGAACAT TTTCAGTGCT ATAGCTGCGG TCTTTTCCAT TATTATGCTT 
TCACTGGGTT TGGCTGTTGG ACCCACCAAC CGTTACTGCA GAGACTTTTA TTGTTATAAT 
TATACGACTC TCCTCTCAGG AATCAATGGT GTGTTGCTGG CGTTCGCCAT CCTTGAGTTC 
TTCATCTCCA TCTGCCTATC TGTGTTTGCC TGTAAAGTCA CCTGCTGCTG TAAGCCTAAG 
ATTCATGTGA GCAGCAACCC TTTAATTCAA CGCCCTCCTG CAGAAACGCC CCAACAGTAC 
AGTCAATGTC CTCAAGAAGT CCCTGAACCA TGCTTTCAAC ATCCTCCTGC AGAAACTCCC 
CCAGCGTACA CTGAAGGCAA ATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC798290 ( NM_001100061.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001093531.1 Danio rerio uncharacterized LOC798290 (LOC798290), mRNA.

Price & Availability↑

CloneID	ODa09918
Clone ID Related Accession (Same CDS sequence)	NM_001100061.2 , XM_017355104.1 , NM_001100061.1 , XM_017355104.2
Accession Version	NM_001100061.1	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 744bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-07-05
Organism	Danio rerio(zebrafish)
Product	uncharacterized protein LOC798290
Comment	Comment: PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from CR762404.6. On Jul 26, 2007 this sequence version replaced XM_001334223.1. ##Evidence-Data-START## Transcript exon combination :: EH434885.1, BC163051.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGGCGACTG TCAGAGCCAT GAATCCTTCA ACGATTGTCA TCCAGCTTCA GCCACTGACA 
CAAACAGCAA CTGGGACCAG TTCTTCTGTG CCTGTGCGCA TACAGCATGT AGCAGGAGTT 
TCACCTCGTC AAGGAATTCA GGCCTTTCTT AAAGGCCAAC CGAAAGCCCT CGGGACTGTC 
CAGATAATGA TCGGTGTGTT GACCTTCCTG TTGGGAATCT TGTGTACAAT TTATGGAAAT 
TATATCTTCT TCTTCACTGG TGTTTCTTAC GTGGCATCTC TGATATACAT TACTACAGGC 
TTGCTCTCCA TTGCTGCTGA AAACAAAATC AATTCACCAT CTGCTTTATG TCTGGTGAGA 
GCTTCCCTCG GGATGAACAT TTTCAGTGCT ATAGCTGCGG TCTTTTCCAT TATTATGCTT 
TCACTGGGTT TGGCTGTTGG ACCCACCAAC CGTTACTGCA GAGACTTTTA TTGTTATAAT 
TATACGACTC TCCTCTCAGG AATCAATGGT GTGTTGCTGG CGTTCGCCAT CCTTGAGTTC 
TTCATCTCCA TCTGCCTATC TGTGTTTGCC TGTAAAGTCA CCTGCTGCTG TAAGCCTAAG 
ATTCATGTGA GCAGCAACCC TTTAATTCAA CGCCCTCCTG CAGAAACGCC CCAACAGTAC 
AGTCAATGTC CTCAAGAAGT CCCTGAACCA TGCTTTCAAC ATCCTCCTGC AGAAACTCCC 
CCAGCGTACA CTGAAGGCAA ATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001093531.1
CDS	71..814
Translation	MATVRAMNPSTIVIQLQPLTQTATGTSSSVPVRIQHVAGVSPRQGIQAFLKGQPKALGTVQIMIGVLTFLLGILCTIYGNYIFFFTGVSYVASLIYITTGLLSIAAENKINSPSALCLVRASLGMNIFSAIAAVFSIIMLSLGLAVGPTNRYCRDFYCYNYTTLLSGINGVLLAFAILEFFISICLSVFACKVTCCCKPKIHVSSNPLIQRPPAETPQQYSQCPQEVPEPCFQHPPAETPPAYTEGK

Target ORF information:

RefSeq Version	NM_001100061.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio uncharacterized LOC798290 (LOC798290), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001100061.1

ORF Insert Sequence:

ATGGCGACTG TCAGAGCCAT GAATCCTTCA ACGATTGTCA TCCAGCTTCA GCCACTGACA 
CAAACAGCAA CTGGGACCAG TTCTTCTGTG CCTGTGCGCA TACAGCATGT AGCAGGAGTT 
TCACCTCGTC AAGGAATTCA GGCCTTTCTT AAAGGCCAAC CGAAAGCCCT CGGGACTGTC 
CAGATAATGA TCGGTGTGTT GACCTTCCTG TTGGGAATCT TGTGTACAAT TTATGGAAAT 
TATATCTTCT TCTTCACTGG TGTTTCTTAC GTGGCATCTC TGATATACAT TACTACAGGC 
TTGCTCTCCA TTGCTGCTGA AAACAAAATC AATTCACCAT CTGCTTTATG TCTGGTGAGA 
GCTTCCCTCG GGATGAACAT TTTCAGTGCT ATAGCTGCGG TCTTTTCCAT TATTATGCTT 
TCACTGGGTT TGGCTGTTGG ACCCACCAAC CGTTACTGCA GAGACTTTTA TTGTTATAAT 
TATACGACTC TCCTCTCAGG AATCAATGGT GTGTTGCTGG CGTTCGCCAT CCTTGAGTTC 
TTCATCTCCA TCTGCCTATC TGTGTTTGCC TGTAAAGTCA CCTGCTGCTG TAAGCCTAAG 
ATTCATGTGA GCAGCAACCC TTTAATTCAA CGCCCTCCTG CAGAAACGCC CCAACAGTAC 
AGTCAATGTC CTCAAGAAGT CCCTGAACCA TGCTTTCAAC ATCCTCCTGC AGAAACTCCC 
CCAGCGTACA CTGAAGGCAA ATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC798290 ( XM_017355104.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_017210593.1 Danio rerio uncharacterized LOC798290 (LOC798290), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa09918
Clone ID Related Accession (Same CDS sequence)	NM_001100061.2 , XM_017355104.1 , NM_001100061.1 , XM_017355104.2
Accession Version	XM_017355104.1	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 744bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	uncharacterized protein LOC798290 isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007115.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCGACTG TCAGAGCCAT GAATCCTTCA ACGATTGTCA TCCAGCTTCA GCCACTGACA 
CAAACAGCAA CTGGGACCAG TTCTTCTGTG CCTGTGCGCA TACAGCATGT AGCAGGAGTT 
TCACCTCGTC AAGGAATTCA GGCCTTTCTT AAAGGCCAAC CGAAAGCCCT CGGGACTGTC 
CAGATAATGA TCGGTGTGTT GACCTTCCTG TTGGGAATCT TGTGTACAAT TTATGGAAAT 
TATATCTTCT TCTTCACTGG TGTTTCTTAC GTGGCATCTC TGATATACAT TACTACAGGC 
TTGCTCTCCA TTGCTGCTGA AAACAAAATC AATTCACCAT CTGCTTTATG TCTGGTGAGA 
GCTTCCCTCG GGATGAACAT TTTCAGTGCT ATAGCTGCGG TCTTTTCCAT TATTATGCTT 
TCACTGGGTT TGGCTGTTGG ACCCACCAAC CGTTACTGCA GAGACTTTTA TTGTTATAAT 
TATACGACTC TCCTCTCAGG AATCAATGGT GTGTTGCTGG CGTTCGCCAT CCTTGAGTTC 
TTCATCTCCA TCTGCCTATC TGTGTTTGCC TGTAAAGTCA CCTGCTGCTG TAAGCCTAAG 
ATTCATGTGA GCAGCAACCC TTTAATTCAA CGCCCTCCTG CAGAAACGCC CCAACAGTAC 
AGTCAATGTC CTCAAGAAGT CCCTGAACCA TGCTTTCAAC ATCCTCCTGC AGAAACTCCC 
CCAGCGTACA CTGAAGGCAA ATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017210593.1
CDS	143..886
Translation	MATVRAMNPSTIVIQLQPLTQTATGTSSSVPVRIQHVAGVSPRQGIQAFLKGQPKALGTVQIMIGVLTFLLGILCTIYGNYIFFFTGVSYVASLIYITTGLLSIAAENKINSPSALCLVRASLGMNIFSAIAAVFSIIMLSLGLAVGPTNRYCRDFYCYNYTTLLSGINGVLLAFAILEFFISICLSVFACKVTCCCKPKIHVSSNPLIQRPPAETPQQYSQCPQEVPEPCFQHPPAETPPAYTEGK

Target ORF information:

RefSeq Version	XM_017355104.1
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio uncharacterized LOC798290 (LOC798290), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017355104.1

ORF Insert Sequence:

ATGGCGACTG TCAGAGCCAT GAATCCTTCA ACGATTGTCA TCCAGCTTCA GCCACTGACA 
CAAACAGCAA CTGGGACCAG TTCTTCTGTG CCTGTGCGCA TACAGCATGT AGCAGGAGTT 
TCACCTCGTC AAGGAATTCA GGCCTTTCTT AAAGGCCAAC CGAAAGCCCT CGGGACTGTC 
CAGATAATGA TCGGTGTGTT GACCTTCCTG TTGGGAATCT TGTGTACAAT TTATGGAAAT 
TATATCTTCT TCTTCACTGG TGTTTCTTAC GTGGCATCTC TGATATACAT TACTACAGGC 
TTGCTCTCCA TTGCTGCTGA AAACAAAATC AATTCACCAT CTGCTTTATG TCTGGTGAGA 
GCTTCCCTCG GGATGAACAT TTTCAGTGCT ATAGCTGCGG TCTTTTCCAT TATTATGCTT 
TCACTGGGTT TGGCTGTTGG ACCCACCAAC CGTTACTGCA GAGACTTTTA TTGTTATAAT 
TATACGACTC TCCTCTCAGG AATCAATGGT GTGTTGCTGG CGTTCGCCAT CCTTGAGTTC 
TTCATCTCCA TCTGCCTATC TGTGTTTGCC TGTAAAGTCA CCTGCTGCTG TAAGCCTAAG 
ATTCATGTGA GCAGCAACCC TTTAATTCAA CGCCCTCCTG CAGAAACGCC CCAACAGTAC 
AGTCAATGTC CTCAAGAAGT CCCTGAACCA TGCTTTCAAC ATCCTCCTGC AGAAACTCCC 
CCAGCGTACA CTGAAGGCAA ATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC798290 ( XM_017355104.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_017210593.1 Danio rerio uncharacterized LOC798290 (LOC798290), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa09918
Clone ID Related Accession (Same CDS sequence)	NM_001100061.2 , XM_017355104.1 , NM_001100061.1 , XM_017355104.2
Accession Version	XM_017355104.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 744bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	uncharacterized protein LOC798290 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007115.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_017355104.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCGACTG TCAGAGCCAT GAATCCTTCA ACGATTGTCA TCCAGCTTCA GCCACTGACA 
CAAACAGCAA CTGGGACCAG TTCTTCTGTG CCTGTGCGCA TACAGCATGT AGCAGGAGTT 
TCACCTCGTC AAGGAATTCA GGCCTTTCTT AAAGGCCAAC CGAAAGCCCT CGGGACTGTC 
CAGATAATGA TCGGTGTGTT GACCTTCCTG TTGGGAATCT TGTGTACAAT TTATGGAAAT 
TATATCTTCT TCTTCACTGG TGTTTCTTAC GTGGCATCTC TGATATACAT TACTACAGGC 
TTGCTCTCCA TTGCTGCTGA AAACAAAATC AATTCACCAT CTGCTTTATG TCTGGTGAGA 
GCTTCCCTCG GGATGAACAT TTTCAGTGCT ATAGCTGCGG TCTTTTCCAT TATTATGCTT 
TCACTGGGTT TGGCTGTTGG ACCCACCAAC CGTTACTGCA GAGACTTTTA TTGTTATAAT 
TATACGACTC TCCTCTCAGG AATCAATGGT GTGTTGCTGG CGTTCGCCAT CCTTGAGTTC 
TTCATCTCCA TCTGCCTATC TGTGTTTGCC TGTAAAGTCA CCTGCTGCTG TAAGCCTAAG 
ATTCATGTGA GCAGCAACCC TTTAATTCAA CGCCCTCCTG CAGAAACGCC CCAACAGTAC 
AGTCAATGTC CTCAAGAAGT CCCTGAACCA TGCTTTCAAC ATCCTCCTGC AGAAACTCCC 
CCAGCGTACA CTGAAGGCAA ATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017210593.1
CDS	159..902
Translation	MATVRAMNPSTIVIQLQPLTQTATGTSSSVPVRIQHVAGVSPRQGIQAFLKGQPKALGTVQIMIGVLTFLLGILCTIYGNYIFFFTGVSYVASLIYITTGLLSIAAENKINSPSALCLVRASLGMNIFSAIAAVFSIIMLSLGLAVGPTNRYCRDFYCYNYTTLLSGINGVLLAFAILEFFISICLSVFACKVTCCCKPKIHVSSNPLIQRPPAETPQQYSQCPQEVPEPCFQHPPAETPPAYTEGK

Target ORF information:

RefSeq Version	XM_017355104.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio uncharacterized LOC798290 (LOC798290), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017355104.2

ORF Insert Sequence:

ATGGCGACTG TCAGAGCCAT GAATCCTTCA ACGATTGTCA TCCAGCTTCA GCCACTGACA 
CAAACAGCAA CTGGGACCAG TTCTTCTGTG CCTGTGCGCA TACAGCATGT AGCAGGAGTT 
TCACCTCGTC AAGGAATTCA GGCCTTTCTT AAAGGCCAAC CGAAAGCCCT CGGGACTGTC 
CAGATAATGA TCGGTGTGTT GACCTTCCTG TTGGGAATCT TGTGTACAAT TTATGGAAAT 
TATATCTTCT TCTTCACTGG TGTTTCTTAC GTGGCATCTC TGATATACAT TACTACAGGC 
TTGCTCTCCA TTGCTGCTGA AAACAAAATC AATTCACCAT CTGCTTTATG TCTGGTGAGA 
GCTTCCCTCG GGATGAACAT TTTCAGTGCT ATAGCTGCGG TCTTTTCCAT TATTATGCTT 
TCACTGGGTT TGGCTGTTGG ACCCACCAAC CGTTACTGCA GAGACTTTTA TTGTTATAAT 
TATACGACTC TCCTCTCAGG AATCAATGGT GTGTTGCTGG CGTTCGCCAT CCTTGAGTTC 
TTCATCTCCA TCTGCCTATC TGTGTTTGCC TGTAAAGTCA CCTGCTGCTG TAAGCCTAAG 
ATTCATGTGA GCAGCAACCC TTTAATTCAA CGCCCTCCTG CAGAAACGCC CCAACAGTAC 
AGTCAATGTC CTCAAGAAGT CCCTGAACCA TGCTTTCAAC ATCCTCCTGC AGAAACTCCC 
CCAGCGTACA CTGAAGGCAA ATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Identification of target genes downstream of semaphorin6A/PlexinA2 signaling in zebrafish.
Developmental dynamics : an official publication of the American Association of Anatomists246(7)539-549(2017 Jul)
Emerson SE,St Clair RM,Waldron AL,Bruno SR,Duong A,Driscoll HE,Ballif BA,McFarlane S,Ebert AM

Contrasted innate responses to two viruses in zebrafish: insights into the ancestral repertoire of vertebrate IFN-stimulated genes.
Journal of immunology (Baltimore, Md. : 1950)192(9)4328-41(2014 May)
Briolat V,Jouneau L,Carvalho R,Palha N,Langevin C,Herbomel P,Schwartz O,Spaink HP,Levraud JP,Boudinot P

Phylogenetic analysis of the MS4A and TMEM176 gene families.
PloS one5(2)e9369(2010 Feb)
Zuccolo J,Bau J,Childs SJ,Goss GG,Sensen CW,Deans JP

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
Proceedings of the National Academy of Sciences of the United States of America99(26)16899-903(2002 Dec)
Strausberg RL,Feingold EA,Grouse LH,Derge JG,Klausner RD,Collins FS,Wagner L,Shenmen CM,Schuler GD,Altschul SF,Zeeberg B,Buetow KH,Schaefer CF,Bhat NK,Hopkins RF,Jordan H,Moore T,Max SI,Wang J,Hsieh F,Diatchenko L,Marusina K,Farmer AA,Rubin GM,Hong L,Stapleton M,Soares MB,Bonaldo MF,Casavant TL,Scheetz TE,Brownstein MJ,Usdin TB,Toshiyuki S,Carninci P,Prange C,Raha SS,Loquellano NA,Peters GJ,Abramson RD,Mullahy SJ,Bosak SA,McEwan PJ,McKernan KJ,Malek JA,Gunaratne PH,Richards S,Worley KC,Hale S,Garcia AM,Gay LJ,Hulyk SW,Villalon DK,Muzny DM,Sodergren EJ,Lu X,Gibbs RA,Fahey J,Helton E,Ketteman M,Madan A,Rodrigues S,Sanchez A,Whiting M,Madan A,Young AC,Shevchenko Y,Bouffard GG,Blakesley RW,Touchman JW,Green ED,Dickson MC,Rodriguez AC,Grimwood J,Schmutz J,Myers RM,Butterfield YS,Krzywinski MI,Skalska U,Smailus DE,Schnerch A,Schein JE,Jones SJ,Marra MA,

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LOC798290 cDNA ORF clone, Danio rerio(zebrafish)

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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