pdzrn4 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	pdzrn4
Entrez Gene ID	798289
Full Name	PDZ domain containing ring finger 4
Synonyms	si:dkey-240a12.3
General protein information	Preferred Names PDZ domain containing ring finger 4 Names PDZ domain-containing RING finger protein 4
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001082923.2	NP_001076392.1	PDZ domain-containing RING finger protein 4

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	PDZRN4	XP_003640016.1
Pan troglodytes (chimpanzee)	PDZRN4	XP_001167876.1
	PDZRN4	XP_001089369.1
Homo sapiens (human)	PDZRN4	NP_001158067.1
Mus musculus (house mouse)	Pdzrn4	NP_001158065.1
Rattus norvegicus (Norway rat)	Pdzrn4	NP_001101577.2
Gallus gallus (chicken)	PDZRN4	XP_416030.4
Danio rerio (zebrafish)	pdzrn4	NP_001076392.1
Xenopus tropicalis (tropical clawed frog)	pdzrn4	XP_002932856.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following pdzrn4 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the pdzrn4 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa31867	NM_001082923.2 Latest version!	Danio rerio PDZ domain containing ring finger 4 (pdzrn4), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

pdzrn4 ( NM_001082923.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001076392.1 Danio rerio PDZ domain containing ring finger 4 (pdzrn4), mRNA.

Price & Availability↑

CloneID	ODa31867
Clone ID Related Accession (Same CDS sequence)	NM_001082923.2
Accession Version	NM_001082923.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2367bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	PDZ domain-containing RING finger protein 4
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX897729.6 and CR388204.7. On Mar 20, 2011 this sequence version replaced NM_001082923.1. ##Evidence-Data-START## Transcript exon combination :: GFIL01029931.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505377 [ECO:0000348] ##Evidence-Data-END##

ATGGGCTGTA ACCTGTGCAC GCTGCAGAAG AGAGAGGAGC ACTACAAGCT GCTGTACGAG 
ATCGCACAGG TGAATGGTCG TGAGTTCTCG AAGTCTGGTC ATGATGGGAC GGTGGAGGCC 
CTGCGGAAGG AGCCGATCGT GGTGCAGGTT TTAAGACGTG GCCCATCGTC TGTAACCCAG 
AGCCTGCAGG AGGTTTGTGT GGTGGACGTT TGCACTCAGA CTGACATCAC CTTTGAGCAC 
ATCATGGCTC TGGCTAAAAT GAGACCCTCG ACTCCACCGG TGCCAGACAT CTGTCCATTC 
CTGCTGTCCG ACAGCTGTCA TTCCATTCAG ACTATGGAGC ATGAATATTT CGATTGTCCA 
GAATATGTAG CCAGCACTCA GGCAGATGTG GACAGAGCAG TTGAGTTTGA GTGTGAGGAG 
GTTGAGCTCT GTCGAATGAA CAGCCAGGAA AAGCTGGGTT TGACTCTGTG TTACCGCACT 
GATGACGAGG AAGATACAGC AATCTTTGTT GGTCAGGTCG AGCTCAACAG CATCGCTGCG 
AGGGATGGAC GCATCAGAGA GGGAGACCGG ATTTTACAGA TAAATGGTCG TGATGTGCAG 
AACAGGGAAG AAGCGGTTGC ACTCCTTTCA AATGAAAATT CAAGATCCAT AGTGTTACTT 
GTCACAAGAC CTGAAGGACA GATGGATGGA AACTGGCTTG ACGAGGATCA TCATGATTTC 
CTCGAAGAGC TGAAGATGGA GATTTTAGAG GAACAGAAAA AAGAGGGAAT CCTTCAAACA 
GCAGGTTGCA TGAAGCTTTC TACAAGGCAG GAGGATGCAA GTACAGATAC AGCAACATGC 
TCCTCCTCCA TTCTTGAGAA AGACAGTGGC ATGAAATGTA GCTTTGAGGA AAGTTCTGAA 
CATGAGTTTC TGTCTTATCC CCGGACTCAA AAACAACTTC GGGACAGGTG GGAAGCAAGC 
TCACATTTGG TTCCTATGGA CACCATGCAG GAGAAAAAGG GTCAGGATAA CAGATTGAGC 
GAAAACGGGG TGGAATGTGA CCATTTTCAG CAACTTCTAG AGCTTAAGTG CCAGATCCGC 
AATGGTGGAG AATGCGGGTT AGTCTATAGG CGAAGCAGCA CTATTGAGTG CAGCCTCACA 
GAGCAAGGTG GAAGTGGAGT GGCAAGGGAG TTGCACATGC TCAACGAAGA GCTGCGCAGC 
ATTGAACTTG AGTGTCAGAG CATCATGCAA GCTCATCAGT TGCGCAGGAG CAAGCATGAC 
TCACCTAGAA TGGATAAGGA AAATCGTCTG CGACGTGGCA AGCTTGCAGA TATTAATGAG 
CATCCTGAAA GACTACAAAG TGAGAAGCTC AGAGATAAAG ACAGCTCTAG TGCCTACAAT 
ACAGCTGAAA GTTCCCGCTC AACTCCCCTG GGAACAGAAG GATCACCTGA TCACTCCTTA 
CAACGTCGAA TCCACTTGAC CAACCAGAGG AACCTTCGAA GTATGCAGAG TCCCTACAGT 
AGCCCCATCT TGTCTTTACC CAGCCAAAGT AGCTCCACTT GCAGCCGTGC CCATACCTAC 
ACCAGCTCCA CACCTCCATT ACAGACCCCC ATCACCAGTC CCGGATCACA AGGACCCAGC 
CAGGCCTTCT CCAGCAGTTT GGAGCAAAGT CCCAGCAACC CTTCAGAGTC AGACCCAGCA 
CTTCCTGCTG ATGATGAGCG CTGTGAGAAA GAAAGAAACA GGAATAGGTT AGCAGCGGCT 
CGACAATATC ATTCGCCCTA CCACACCAGC ACTACAACAA CCCAGCCTCC CAGCACACGC 
CACTACCAGA GTTACCTTCA GCTCCTACAA CAACATTCCT CTTCCTCTCT GGAATACTCC 
CAAAGTCAGC TTAGCCTCCT CAGCCTCCGC GGACGGCCTG GACCTTCGCA AGCTGGTAGA 
CTTGAATGGA AGGTCAAAGT CCGAGCAGAC GGAACCAGGT ATGTAGCACG TCGTCCAGCA 
CGAGATCGTA TCCTACGTGA ACGAGCCTTA CGAATAAGGG AGGAACGCAG CGGCGGGATG 
ACTACGGATG ATGATGCAGT CAGCGAGCTG AAGATGGGGC GGTACTGGAG CAAAGAAGAA 
CGCAAGCAGC AGCTAGCCAG GGCAAGGGAA CAGCGACGCA GGAGGGAGTT CATGCAGAAA 
AGCCGACTTG AGTGCCTCAG GGAAACTATG GGGACGGCAA GCGGGGAGGT CAGCATCCTG 
GAGCTCAGCC ATAAGAAGAT GCTGAAGAAA CGAAACAAGA AGATCCTTGA CAACTGGATG 
ACCATTCAAG AACTCATGAG TCATGGAGCA CGAGCACCTG AGGGCACCAA AGTTCACAAT 
GCCTTCCTTT CAGTCACTAC AGTTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001076392.1
CDS	1..2367
Translation	MGCNLCTLQKREEHYKLLYEIAQVNGREFSKSGHDGTVEALRKEPIVVQVLRRGPSSVTQSLQEVCVVDVCTQTDITFEHIMALAKMRPSTPPVPDICPFLLSDSCHSIQTMEHEYFDCPEYVASTQADVDRAVEFECEEVELCRMNSQEKLGLTLCYRTDDEEDTAIFVGQVELNSIAARDGRIREGDRILQINGRDVQNREEAVALLSNENSRSIVLLVTRPEGQMDGNWLDEDHHDFLEELKMEILEEQKKEGILQTAGCMKLSTRQEDASTDTATCSSSILEKDSGMKCSFEESSEHEFLSYPRTQKQLRDRWEASSHLVPMDTMQEKKGQDNRLSENGVECDHFQQLLELKCQIRNGGECGLVYRRSSTIECSLTEQGGSGVARELHMLNEELRSIELECQSIMQAHQLRRSKHDSPRMDKENRLRRGKLADINEHPERLQSEKLRDKDSSSAYNTAESSRSTPLGTEGSPDHSLQRRIHLTNQRNLRSMQSPYSSPILSLPSQSSSTCSRAHTYTSSTPPLQTPITSPGSQGPSQAFSSSLEQSPSNPSESDPALPADDERCEKERNRNRLAAARQYHSPYHTSTTTTQPPSTRHYQSYLQLLQQHSSSSLEYSQSQLSLLSLRGRPGPSQAGRLEWKVKVRADGTRYVARRPARDRILRERALRIREERSGGMTTDDDAVSELKMGRYWSKEERKQQLARAREQRRRREFMQKSRLECLRETMGTASGEVSILELSHKKMLKKRNKKILDNWMTIQELMSHGARAPEGTKVHNAFLSVTTV

Target ORF information:

RefSeq Version	NM_001082923.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio PDZ domain containing ring finger 4 (pdzrn4), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001082923.2

ORF Insert Sequence:

ATGGGCTGTA ACCTGTGCAC GCTGCAGAAG AGAGAGGAGC ACTACAAGCT GCTGTACGAG 
ATCGCACAGG TGAATGGTCG TGAGTTCTCG AAGTCTGGTC ATGATGGGAC GGTGGAGGCC 
CTGCGGAAGG AGCCGATCGT GGTGCAGGTT TTAAGACGTG GCCCATCGTC TGTAACCCAG 
AGCCTGCAGG AGGTTTGTGT GGTGGACGTT TGCACTCAGA CTGACATCAC CTTTGAGCAC 
ATCATGGCTC TGGCTAAAAT GAGACCCTCG ACTCCACCGG TGCCAGACAT CTGTCCATTC 
CTGCTGTCCG ACAGCTGTCA TTCCATTCAG ACTATGGAGC ATGAATATTT CGATTGTCCA 
GAATATGTAG CCAGCACTCA GGCAGATGTG GACAGAGCAG TTGAGTTTGA GTGTGAGGAG 
GTTGAGCTCT GTCGAATGAA CAGCCAGGAA AAGCTGGGTT TGACTCTGTG TTACCGCACT 
GATGACGAGG AAGATACAGC AATCTTTGTT GGTCAGGTCG AGCTCAACAG CATCGCTGCG 
AGGGATGGAC GCATCAGAGA GGGAGACCGG ATTTTACAGA TAAATGGTCG TGATGTGCAG 
AACAGGGAAG AAGCGGTTGC ACTCCTTTCA AATGAAAATT CAAGATCCAT AGTGTTACTT 
GTCACAAGAC CTGAAGGACA GATGGATGGA AACTGGCTTG ACGAGGATCA TCATGATTTC 
CTCGAAGAGC TGAAGATGGA GATTTTAGAG GAACAGAAAA AAGAGGGAAT CCTTCAAACA 
GCAGGTTGCA TGAAGCTTTC TACAAGGCAG GAGGATGCAA GTACAGATAC AGCAACATGC 
TCCTCCTCCA TTCTTGAGAA AGACAGTGGC ATGAAATGTA GCTTTGAGGA AAGTTCTGAA 
CATGAGTTTC TGTCTTATCC CCGGACTCAA AAACAACTTC GGGACAGGTG GGAAGCAAGC 
TCACATTTGG TTCCTATGGA CACCATGCAG GAGAAAAAGG GTCAGGATAA CAGATTGAGC 
GAAAACGGGG TGGAATGTGA CCATTTTCAG CAACTTCTAG AGCTTAAGTG CCAGATCCGC 
AATGGTGGAG AATGCGGGTT AGTCTATAGG CGAAGCAGCA CTATTGAGTG CAGCCTCACA 
GAGCAAGGTG GAAGTGGAGT GGCAAGGGAG TTGCACATGC TCAACGAAGA GCTGCGCAGC 
ATTGAACTTG AGTGTCAGAG CATCATGCAA GCTCATCAGT TGCGCAGGAG CAAGCATGAC 
TCACCTAGAA TGGATAAGGA AAATCGTCTG CGACGTGGCA AGCTTGCAGA TATTAATGAG 
CATCCTGAAA GACTACAAAG TGAGAAGCTC AGAGATAAAG ACAGCTCTAG TGCCTACAAT 
ACAGCTGAAA GTTCCCGCTC AACTCCCCTG GGAACAGAAG GATCACCTGA TCACTCCTTA 
CAACGTCGAA TCCACTTGAC CAACCAGAGG AACCTTCGAA GTATGCAGAG TCCCTACAGT 
AGCCCCATCT TGTCTTTACC CAGCCAAAGT AGCTCCACTT GCAGCCGTGC CCATACCTAC 
ACCAGCTCCA CACCTCCATT ACAGACCCCC ATCACCAGTC CCGGATCACA AGGACCCAGC 
CAGGCCTTCT CCAGCAGTTT GGAGCAAAGT CCCAGCAACC CTTCAGAGTC AGACCCAGCA 
CTTCCTGCTG ATGATGAGCG CTGTGAGAAA GAAAGAAACA GGAATAGGTT AGCAGCGGCT 
CGACAATATC ATTCGCCCTA CCACACCAGC ACTACAACAA CCCAGCCTCC CAGCACACGC 
CACTACCAGA GTTACCTTCA GCTCCTACAA CAACATTCCT CTTCCTCTCT GGAATACTCC 
CAAAGTCAGC TTAGCCTCCT CAGCCTCCGC GGACGGCCTG GACCTTCGCA AGCTGGTAGA 
CTTGAATGGA AGGTCAAAGT CCGAGCAGAC GGAACCAGGT ATGTAGCACG TCGTCCAGCA 
CGAGATCGTA TCCTACGTGA ACGAGCCTTA CGAATAAGGG AGGAACGCAG CGGCGGGATG 
ACTACGGATG ATGATGCAGT CAGCGAGCTG AAGATGGGGC GGTACTGGAG CAAAGAAGAA 
CGCAAGCAGC AGCTAGCCAG GGCAAGGGAA CAGCGACGCA GGAGGGAGTT CATGCAGAAA 
AGCCGACTTG AGTGCCTCAG GGAAACTATG GGGACGGCAA GCGGGGAGGT CAGCATCCTG 
GAGCTCAGCC ATAAGAAGAT GCTGAAGAAA CGAAACAAGA AGATCCTTGA CAACTGGATG 
ACCATTCAAG AACTCATGAG TCATGGAGCA CGAGCACCTG AGGGCACCAA AGTTCACAAT 
GCCTTCCTTT CAGTCACTAC AGTTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

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pdzrn4 cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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