cxl34b.11 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	cxl34b.11
Entrez Gene ID	796252
Full Name	CX chemokine ligand 34b, duplicate 11
Synonyms	cxl1,si:dkey-25o1.2
General protein information	Preferred Names CX chemokine ligand 34b, duplicate 11 Names uncharacterized protein LOC796252 CXL chemokine 1 CXL-chr24a CXL34bk chemokine CXL-C24a
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001115062.1	NP_001108534.1	uncharacterized protein LOC796252 precursor

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Structural insight into the evolution of a new chemokine family from zebrafish.
Rajasekaran D, Fan C, Meng W, Pflugrath JW, Lolis EJ
Proteins82(5)708-16(2014 May)

Systematic classification of vertebrate chemokines based on conserved synteny and evolutionary history.
Nomiyama H, Osada N, Yoshie O
Genes to cells : devoted to molecular & cellular mechanisms18(1)1-16(2013 Jan)

Extensive expansion and diversification of the chemokine gene family in zebrafish: identification of a novel chemokine subfamily CX.
Nomiyama H, Hieshima K, Osada N, Kato-Unoki Y, Otsuka-Ono K, Takegawa S, Izawa T, Yoshizawa A, Kikuchi Y, Tanase S, Miura R, Kusuda J, Nakao M, Yoshie O
BMC genomics9222(2008 May)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following cxl34b.11 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cxl34b.11 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa02288	NM_001115062.1 Latest version!	Danio rerio CX chemokine ligand 34b, duplicate 11 (cxl34b.11), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

cxl34b.11 ( NM_001115062.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001108534.1 Danio rerio CX chemokine ligand 34b, duplicate 11 (cxl34b.11), mRNA.

Price & Availability↑

CloneID	ODa02288
Clone ID Related Accession (Same CDS sequence)	NM_001115062.1
Accession Version	NM_001115062.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 348bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	uncharacterized protein LOC796252 precursor
Comment	Comment: PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from AB331756.1. On Mar 2, 2008 this sequence version replaced XM_001334421.1. ##Evidence-Data-START## Transcript exon combination :: AB331756.1, AW233242.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGCATCTGT CCTCTGTATC TCATCAAATG ATCATTTCGT CTCGTTTGCT TTTGCTCCTG 
TATGCTTTTA CATCAGTAGT TTTTATTTCA GTGTCAGAAG GTTGGAGCAG TACCGACAAG 
AATTTTGATA ATAGACCCGG AGTTTGCTTC AAAGTGCTGA CAACAAAAGA ACCAAAGGCT 
AACATTAAAC GTTGTTACAA CCTTCCAAAA ACCAATAATT GTCTTAAGTG TGTGCTGTTT 
GTTGATGCAT CGAACAGGAT GAAATGTATA GATCCTAATG CTTCATGGCT TGCTGAAAGG 
CTATATCGTC TAAAAGAGAA AGGGGTAACG TGTAGAGGGG AGGCTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001108534.1
CDS	1..348
Translation	MHLSSVSHQMIISSRLLLLLYAFTSVVFISVSEGWSSTDKNFDNRPGVCFKVLTTKEPKANIKRCYNLPKTNNCLKCVLFVDASNRMKCIDPNASWLAERLYRLKEKGVTCRGEA

Target ORF information:

RefSeq Version	NM_001115062.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio CX chemokine ligand 34b, duplicate 11 (cxl34b.11), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001115062.1

ORF Insert Sequence:

ATGCATCTGT CCTCTGTATC TCATCAAATG ATCATTTCGT CTCGTTTGCT TTTGCTCCTG 
TATGCTTTTA CATCAGTAGT TTTTATTTCA GTGTCAGAAG GTTGGAGCAG TACCGACAAG 
AATTTTGATA ATAGACCCGG AGTTTGCTTC AAAGTGCTGA CAACAAAAGA ACCAAAGGCT 
AACATTAAAC GTTGTTACAA CCTTCCAAAA ACCAATAATT GTCTTAAGTG TGTGCTGTTT 
GTTGATGCAT CGAACAGGAT GAAATGTATA GATCCTAATG CTTCATGGCT TGCTGAAAGG 
CTATATCGTC TAAAAGAGAA AGGGGTAACG TGTAGAGGGG AGGCTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Structural insight into the evolution of a new chemokine family from zebrafish.
Proteins82(5)708-16(2014 May)
Rajasekaran D,Fan C,Meng W,Pflugrath JW,Lolis EJ

Systematic classification of vertebrate chemokines based on conserved synteny and evolutionary history.
Genes to cells : devoted to molecular & cellular mechanisms18(1)1-16(2013 Jan)
Nomiyama H,Osada N,Yoshie O

Extensive expansion and diversification of the chemokine gene family in zebrafish: identification of a novel chemokine subfamily CX.
BMC genomics9222(2008 May)
Nomiyama H,Hieshima K,Osada N,Kato-Unoki Y,Otsuka-Ono K,Takegawa S,Izawa T,Yoshizawa A,Kikuchi Y,Tanase S,Miura R,Kusuda J,Nakao M,Yoshie O