hps3 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	hps3
Entrez Gene ID	777758
Full Name	Hermansky-Pudlak syndrome 3
Synonyms	zgc:152969
General protein information	Preferred Names Hermansky-Pudlak syndrome 3 Names Hermansky-Pudlak syndrome 3 protein
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001193542.1	NP_001180471.1	Hermansky-Pudlak syndrome 3 protein
XM_005161859.2	XP_005161916.1	Hermansky-Pudlak syndrome 3 protein isoform X1

Pathways from BioSystems

Homologies

Bos taurus (cattle)	HPS3	NP_001178106.1
Danio rerio (zebrafish)	hps3	NP_001180471.1
Pan troglodytes (chimpanzee)	HPS3	XP_001139589.1
	HPS3	XP_002803056.1
Canis lupus familiaris (dog)	HPS3	XP_542830.3
Mus musculus (house mouse)	Hps3	NP_542365.3
Homo sapiens (human)	HPS3	NP_115759.2
Rattus norvegicus (Norway rat)	Hps3	NP_001101134.1
Gallus gallus (chicken)	HPS3	XP_422849.2
Xenopus tropicalis (tropical clawed frog)	hps3	XP_002937376.2

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

snow white, a zebrafish model of Hermansky-Pudlak Syndrome type 5.
Daly CM, Willer J, Gregg R, Gross JM
Genetics195(2)481-94(2013 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following hps3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the hps3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa03990	NM_001193542.1 Latest version!	Danio rerio HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 (hps3), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00
ODa27252	XM_005161859.2 Latest version!	Danio rerio Hermansky-Pudlak syndrome 3 (hps3), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

hps3 ( NM_001193542.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001180471.1 Danio rerio HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 (hps3), mRNA.

Price & Availability↑

CloneID	ODa03990
Clone ID Related Accession (Same CDS sequence)	NM_001193542.1
Accession Version	NM_001193542.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3012bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-07
Organism	Danio rerio(zebrafish)
Product	Hermansky-Pudlak syndrome 3 protein
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL954145.13. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: GDQH01015781.1, GFIL01012840.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGGTCCACG TTTACAACTG CCACCCTTTC GCGGCGCAGC GGATCGTGTC GGCGGAGCAG 
GAGCCTGGGC TGGTGTGCTG CGGCGGCGGG GCGCTGTTCG TGGTGAGCGC TGGCGGCTGC 
AAGATAGAGG CGTTTGACCT GCAGCGGGAG GAGAGTCCGG TCATCTGCCG GTTCAGCTGC 
GCGGGGACCG TGCTCAGCCT GCAACACAGC GCCGTGGGGG ATTATCTTGT CACCATAGAA 
GAGAAGAACA ATGCCACGTA CCTGCGGGCC TACACTAACT GGAGGTACCA GGCCGTGGAG 
AAGACCCGAG TCGGGGTGCG TCTGCTGGGT CACCTCCTGC GCGGCTCGTC CTTCCGCGGA 
GCTCCTAAAG AGCAGATGGA GATCATAGAA ATCCCGCTGT TTGAGCCGCC GCTGTGTGTG 
GCCTGCTGCA GTCTCACCGG TGATCTTCTG GTGGGGAGTG CCAAGAGTCT GGTGGTCTTC 
AGTCTGAAGC GGCAGACTCT GAGCGAGCAG CTGTCGGTGC TGGACTTCGA GAGAGTTCTG 
ATACTGCATA TCCAGGGCTG GAGCCCATCT CAGGTGGCCT TTTGTGCGGG ATACCTGGCC 
CTGCAGACAG AGCTGGAGGT GCTGGTCATA AAGCTGGTCC AACAGCAGAA GAGTGCTCAG 
ACTGCTGAAG AAAACGCTCT GCTTCCTGTA GATATCATGG TGGAGACCAG CTTAGAGGAC 
GATGCAGAGA TGAAGAAAGA CGGCTTCAGC CCGCTCCATG AGCAGGAGGA CTTCTTTGTG 
TTTCCTAAGC ACCAGGAGAT GCTGGGTTCT GAAGCGCAGC ACTGCGGGAT CACTTTAGTC 
CCAGAGTGTA CAGCTATGGA CTCTGAAAGT CGAGGAGAAA CCACTGTGGT TTACGTTTTA 
TTCAGGAGGT TTGCGCCTGA TTTCTTCCAA GGCTGCAGCG TAGAGGAGAC ACGCTTGCAC 
TCCCTACAGC TCCACCCGAT ATTTACTGGT AAACAGGAAG AATCCTCCAT CTCCAGATGT 
GGGGATCCTG ATTGTATGTT TGTTTTCTTC TCCTTGCCCA ACACCGGCTA CATGTACAGC 
TTAAAGTCTT CAGTGGAGCT CGTGTCCACA TACCAGTACC CAGAAAAGGC CCACCAGGCT 
GTGCTTAGTG ACCAGTTCCT CTACGTCATC ACCAGGAACG CTCTGCAGTG TTTCACCGTC 
AGATGCAGTG CAGTAGCAGC TCGGGTTCAG GACCCCTACA TCGACACCAC CATGAAGGCC 
TGTCCGCCCT TCAGCATGGA GGTGTGCGCT CTGCGGATCC AGCTCTTTAT CGGCCTCAAG 
GTTCTCTGTC AGGATGGAGA TCATATCGTT CTGCTGACAG CAGCAGATGT GGACAGCAAA 
GAAAACACTG AGAGACCGGC GCGCAAAAAC ACATCCAGAA AGTCGTCGGT CTGTAAGTCG 
ACAGAGGCGC CGGACAGCGC TCACGGCTGG AACCTGTATG TGATCAGCTC TGTGTCCACA 
CTGCAGCTCT ACAGAGAAAT AGTGGAGTAC AGTAAGCGGT ACGAGCAGTC CAACCCGTGT 
TCACAGAGCT GTGTTCATCT GCTCAGTGAA GCTCATCTTC TTCTGCGGTC AGCGCTGCTT 
AAACTGCAGA ACGGCCCTGC TGAGGAGAAG CAGGAGCTGC TGGAGGCCTT TCAGGAGAGC 
TGCGCTCATT TAGGAGACTG TTTCAGCAGG TTTGATAAGA AGGATTGTCA TTTGGCTCTC 
CCATATTATA AGATGTCGGG TCTCACTGTG ACGGATGTTA TTCAGAGGAA CGTCTCCATG 
AGTGGCGTAT CAAGCGGTTA CGGCCGAGGA TTCATCTTCT TCCTGAAGCA TTCGCTGTAT 
GAGGAAACCG TGGAGGAGCT GAGCAAGGAC GTGGCTGATA AAGTACTGGA GATCTTCAGT 
GTTGCTGAAC CGGCTCAGCT TCCTCATGTT GTGTGCTGTT CATCAATGCT GAACGCGGAC 
CCTGATGGCG CCGGGGCCCT TCTGGAGCAG CTGGAGGCCT CCGGGGCCCC GTCCATCACC 
CTGGCCCTCT GTAGAGCCTC ACTAGCCCTG CGCACGGGAG ACCGTCACAC TTACAGCCAG 
CAGATGGAGC GCCACGCCGA GATGCTGCAG GTGTATGGCT TCATCGAAGA GCCCCGACTG 
CTCCTGCATG GTAGAGGTGT GGGTCTGATG CCCACATTAC TGGCCCAGCA GCTGCGGGAC 
TCTCAGGACG GGCTGCTGGT GGCGGCGCTC GTGGCCCTGC ATGAGAACAG CAGAATCAGC 
CTGGAGGACG CACACCTCTT CTTCCAGGAG CTCTGTAAGG ACCGTCTGGA GCCCGACAGC 
AGTCCGCAGT TATTGGTGGA CTTTTGGGAG TCTCTGCTAG TGGCGTCGTC CCGTGAATCC 
ACCATCCAGG AGCTGCTGTT TCGGCTGGTG TCCGTCTACA TCAGCAGGAT AACATGCAGC 
CATCCCAGCG GCTGCAAGGC CCTCAAAACT GCTGATGACC TGATAAACTC CTGCTCTCAT 
TATGGGATGT TGTATCCGTG GGTGAGCATC CTTACACCCA ACCTATACCA TGACCAGCAG 
GAGGACCTGC TCAAACTACA GTCTCTGCTG TGCGGGCCGA CGCTGCAGGT CTCCTCTATT 
CTGCCTCTGC TGGAGCCGCT GTCAGACTCC GATGACCCAG GACTTAGTGT TCATGTGCTC 
TGCTCCACCA AACTGGGCCA GCATGAGGAC TCCATCCACA GACTGCTGGA CCGCTGCCCA 
CAGGCCATCA TCCCATACGC ACAACACCAG CTGCACCACC ACACACTGTG TCTGTGGTGG 
CAGAAACTAT TCCCTGAGGT CTGTGACAGG ATCAGGAAAA CAGGAAATGA CAACACAATC 
CTCCTCTCAG CTCTCAAAGA GACTCTGATC GTAGCGGCGA GGGAACTGAC CCCATTAGAG 
TTTCTGGATT TGCTGCCGGA CGATGGAACA GCTCATTTTT TCTTGCCACA TCTACTTGAA 
TGCTGCCAGT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001180471.1
CDS	126..3137
Translation	MVHVYNCHPFAAQRIVSAEQEPGLVCCGGGALFVVSAGGCKIEAFDLQREESPVICRFSCAGTVLSLQHSAVGDYLVTIEEKNNATYLRAYTNWRYQAVEKTRVGVRLLGHLLRGSSFRGAPKEQMEIIEIPLFEPPLCVACCSLTGDLLVGSAKSLVVFSLKRQTLSEQLSVLDFERVLILHIQGWSPSQVAFCAGYLALQTELEVLVIKLVQQQKSAQTAEENALLPVDIMVETSLEDDAEMKKDGFSPLHEQEDFFVFPKHQEMLGSEAQHCGITLVPECTAMDSESRGETTVVYVLFRRFAPDFFQGCSVEETRLHSLQLHPIFTGKQEESSISRCGDPDCMFVFFSLPNTGYMYSLKSSVELVSTYQYPEKAHQAVLSDQFLYVITRNALQCFTVRCSAVAARVQDPYIDTTMKACPPFSMEVCALRIQLFIGLKVLCQDGDHIVLLTAADVDSKENTERPARKNTSRKSSVCKSTEAPDSAHGWNLYVISSVSTLQLYREIVEYSKRYEQSNPCSQSCVHLLSEAHLLLRSALLKLQNGPAEEKQELLEAFQESCAHLGDCFSRFDKKDCHLALPYYKMSGLTVTDVIQRNVSMSGVSSGYGRGFIFFLKHSLYEETVEELSKDVADKVLEIFSVAEPAQLPHVVCCSSMLNADPDGAGALLEQLEASGAPSITLALCRASLALRTGDRHTYSQQMERHAEMLQVYGFIEEPRLLLHGRGVGLMPTLLAQQLRDSQDGLLVAALVALHENSRISLEDAHLFFQELCKDRLEPDSSPQLLVDFWESLLVASSRESTIQELLFRLVSVYISRITCSHPSGCKALKTADDLINSCSHYGMLYPWVSILTPNLYHDQQEDLLKLQSLLCGPTLQVSSILPLLEPLSDSDDPGLSVHVLCSTKLGQHEDSIHRLLDRCPQAIIPYAQHQLHHHTLCLWWQKLFPEVCDRIRKTGNDNTILLSALKETLIVAARELTPLEFLDLLPDDGTAHFFLPHLLECCQ

Target ORF information:

RefSeq Version	NM_001193542.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 (hps3), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001193542.1

ORF Insert Sequence:

ATGGTCCACG TTTACAACTG CCACCCTTTC GCGGCGCAGC GGATCGTGTC GGCGGAGCAG 
GAGCCTGGGC TGGTGTGCTG CGGCGGCGGG GCGCTGTTCG TGGTGAGCGC TGGCGGCTGC 
AAGATAGAGG CGTTTGACCT GCAGCGGGAG GAGAGTCCGG TCATCTGCCG GTTCAGCTGC 
GCGGGGACCG TGCTCAGCCT GCAACACAGC GCCGTGGGGG ATTATCTTGT CACCATAGAA 
GAGAAGAACA ATGCCACGTA CCTGCGGGCC TACACTAACT GGAGGTACCA GGCCGTGGAG 
AAGACCCGAG TCGGGGTGCG TCTGCTGGGT CACCTCCTGC GCGGCTCGTC CTTCCGCGGA 
GCTCCTAAAG AGCAGATGGA GATCATAGAA ATCCCGCTGT TTGAGCCGCC GCTGTGTGTG 
GCCTGCTGCA GTCTCACCGG TGATCTTCTG GTGGGGAGTG CCAAGAGTCT GGTGGTCTTC 
AGTCTGAAGC GGCAGACTCT GAGCGAGCAG CTGTCGGTGC TGGACTTCGA GAGAGTTCTG 
ATACTGCATA TCCAGGGCTG GAGCCCATCT CAGGTGGCCT TTTGTGCGGG ATACCTGGCC 
CTGCAGACAG AGCTGGAGGT GCTGGTCATA AAGCTGGTCC AACAGCAGAA GAGTGCTCAG 
ACTGCTGAAG AAAACGCTCT GCTTCCTGTA GATATCATGG TGGAGACCAG CTTAGAGGAC 
GATGCAGAGA TGAAGAAAGA CGGCTTCAGC CCGCTCCATG AGCAGGAGGA CTTCTTTGTG 
TTTCCTAAGC ACCAGGAGAT GCTGGGTTCT GAAGCGCAGC ACTGCGGGAT CACTTTAGTC 
CCAGAGTGTA CAGCTATGGA CTCTGAAAGT CGAGGAGAAA CCACTGTGGT TTACGTTTTA 
TTCAGGAGGT TTGCGCCTGA TTTCTTCCAA GGCTGCAGCG TAGAGGAGAC ACGCTTGCAC 
TCCCTACAGC TCCACCCGAT ATTTACTGGT AAACAGGAAG AATCCTCCAT CTCCAGATGT 
GGGGATCCTG ATTGTATGTT TGTTTTCTTC TCCTTGCCCA ACACCGGCTA CATGTACAGC 
TTAAAGTCTT CAGTGGAGCT CGTGTCCACA TACCAGTACC CAGAAAAGGC CCACCAGGCT 
GTGCTTAGTG ACCAGTTCCT CTACGTCATC ACCAGGAACG CTCTGCAGTG TTTCACCGTC 
AGATGCAGTG CAGTAGCAGC TCGGGTTCAG GACCCCTACA TCGACACCAC CATGAAGGCC 
TGTCCGCCCT TCAGCATGGA GGTGTGCGCT CTGCGGATCC AGCTCTTTAT CGGCCTCAAG 
GTTCTCTGTC AGGATGGAGA TCATATCGTT CTGCTGACAG CAGCAGATGT GGACAGCAAA 
GAAAACACTG AGAGACCGGC GCGCAAAAAC ACATCCAGAA AGTCGTCGGT CTGTAAGTCG 
ACAGAGGCGC CGGACAGCGC TCACGGCTGG AACCTGTATG TGATCAGCTC TGTGTCCACA 
CTGCAGCTCT ACAGAGAAAT AGTGGAGTAC AGTAAGCGGT ACGAGCAGTC CAACCCGTGT 
TCACAGAGCT GTGTTCATCT GCTCAGTGAA GCTCATCTTC TTCTGCGGTC AGCGCTGCTT 
AAACTGCAGA ACGGCCCTGC TGAGGAGAAG CAGGAGCTGC TGGAGGCCTT TCAGGAGAGC 
TGCGCTCATT TAGGAGACTG TTTCAGCAGG TTTGATAAGA AGGATTGTCA TTTGGCTCTC 
CCATATTATA AGATGTCGGG TCTCACTGTG ACGGATGTTA TTCAGAGGAA CGTCTCCATG 
AGTGGCGTAT CAAGCGGTTA CGGCCGAGGA TTCATCTTCT TCCTGAAGCA TTCGCTGTAT 
GAGGAAACCG TGGAGGAGCT GAGCAAGGAC GTGGCTGATA AAGTACTGGA GATCTTCAGT 
GTTGCTGAAC CGGCTCAGCT TCCTCATGTT GTGTGCTGTT CATCAATGCT GAACGCGGAC 
CCTGATGGCG CCGGGGCCCT TCTGGAGCAG CTGGAGGCCT CCGGGGCCCC GTCCATCACC 
CTGGCCCTCT GTAGAGCCTC ACTAGCCCTG CGCACGGGAG ACCGTCACAC TTACAGCCAG 
CAGATGGAGC GCCACGCCGA GATGCTGCAG GTGTATGGCT TCATCGAAGA GCCCCGACTG 
CTCCTGCATG GTAGAGGTGT GGGTCTGATG CCCACATTAC TGGCCCAGCA GCTGCGGGAC 
TCTCAGGACG GGCTGCTGGT GGCGGCGCTC GTGGCCCTGC ATGAGAACAG CAGAATCAGC 
CTGGAGGACG CACACCTCTT CTTCCAGGAG CTCTGTAAGG ACCGTCTGGA GCCCGACAGC 
AGTCCGCAGT TATTGGTGGA CTTTTGGGAG TCTCTGCTAG TGGCGTCGTC CCGTGAATCC 
ACCATCCAGG AGCTGCTGTT TCGGCTGGTG TCCGTCTACA TCAGCAGGAT AACATGCAGC 
CATCCCAGCG GCTGCAAGGC CCTCAAAACT GCTGATGACC TGATAAACTC CTGCTCTCAT 
TATGGGATGT TGTATCCGTG GGTGAGCATC CTTACACCCA ACCTATACCA TGACCAGCAG 
GAGGACCTGC TCAAACTACA GTCTCTGCTG TGCGGGCCGA CGCTGCAGGT CTCCTCTATT 
CTGCCTCTGC TGGAGCCGCT GTCAGACTCC GATGACCCAG GACTTAGTGT TCATGTGCTC 
TGCTCCACCA AACTGGGCCA GCATGAGGAC TCCATCCACA GACTGCTGGA CCGCTGCCCA 
CAGGCCATCA TCCCATACGC ACAACACCAG CTGCACCACC ACACACTGTG TCTGTGGTGG 
CAGAAACTAT TCCCTGAGGT CTGTGACAGG ATCAGGAAAA CAGGAAATGA CAACACAATC 
CTCCTCTCAG CTCTCAAAGA GACTCTGATC GTAGCGGCGA GGGAACTGAC CCCATTAGAG 
TTTCTGGATT TGCTGCCGGA CGATGGAACA GCTCATTTTT TCTTGCCACA TCTACTTGAA 
TGCTGCCAGT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

hps3 ( XM_005161859.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005161916.1 Danio rerio Hermansky-Pudlak syndrome 3 (hps3), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa27252
Clone ID Related Accession (Same CDS sequence)	XM_005161859.2
Accession Version	XM_005161859.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3114bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	Hermansky-Pudlak syndrome 3 protein isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007133.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 24, 2014 this sequence version replaced XM_005161859.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGTCCACG TTTACAACTG CCACCCTTTC GCGGCGCAGC GGATCGTGTC GGCGGAGCAG 
GAGCCTGGGC TGGTGTGCTG CGGCGGCGGG GCGCTGTTCG TGGTGAGCGC TGGCGGCTGC 
AAGATAGAGG CGTTTGACCT GCAGCGGGAG GAGAGTCCGG TCATCTGCCG GTTCAGCTGC 
GCGGGGACCG TGCTCAGCCT GCAACACAGC GCCGTGGGGG ATTATCTTGT CACCATAGAA 
GAGAAGAACA ATGCCACGTA CCTGCGGGCC TACACTAACT GGAGGTACCA GGCCGTGGAG 
AAGACCCGAG TCGGGGTGCG TCTGCTGGGT CACCTCCTGC GCGGCTCGTC CTTCCGCGGA 
GCTCCTAAAG AGCAGATGGA GATCATAGAA ATCCCGCTGT TTGAGCCGCC GCTGTGTGTG 
GCCTGCTGCA GTCTCACCGG TGATCTTCTG GTGGGGAGTG CCAAGAGTCT GGTGGTCTTC 
AGTCTGAAGC GGCAGACTCT GAGCGAGCAG CTGTCGGTGC TGGACTTCGA GAGAGTTCTG 
ATACTGCATA TCCAGGGCTG GAGCCCATCT CAGGTGGCCT TTTGTGCGGG ATACCTGGCC 
CTGCAGACAG AGCTGGAGGT GCTGGTCATA AAGCTGGTCC AACAGCAGAA GAGTGCTCAG 
ACTGCTGAAG AAAACGCTCT GCTTCCTGTA GATATCATGG TGGAGACCAG CTTAGAGGAC 
GATGCAGAGA TGAAGAAAGA CGGCTTCAGC CCGCTCCATG AGCAGGAGGA CTTCTTTGTG 
TTTCCTAAGC ACCAGGAGAT GCTGGGTTCT GAAGCGCAGC ACTGCGGGAT CACTTTAGTC 
CCAGAGTGTA CAGCTATGGA CTCTGAAAGT CGAGGAGAAA CCACTGTGGT TTACGTTTTA 
TTCAGGAGGT TTGCGCCTGA TTTCTTCCAA GGCTGCAGCG TAGAGGAGAC ACGCTTGCAC 
TCCCTACAGC TCCACCCGAT ATTTACTGGT AAACAGGAAG AATCCTCCAT CTCCAGATGT 
GGGGATCCTG ATTGTATGTT TGTTTTCTTC TCCTTGCCCA ACACCGGCTA CATGTACAGC 
TTAAAGTCTT CAGTGGAGCT CGTGTCCACA TACCAGTACC CAGAAAAGGC CCACCAGGCT 
GTGCTTAGTG ACCAGTTCCT CTACGTCATC ACCAGGAACG CTCTGCAGTG TTTCACCGTC 
AGATGCAGTG CAGTAGCAGC TCGGGTTCAG GACCCCTACA TCGACACCAC CATGAAGGCC 
TGTCCGCCCT TCAGCATGGA GGTGTGCGCT CTGCGGATCC AGCTCTTTAT CGGCCTCAAG 
GTTCTCTGTC AGGATGGAGA TCATATCGTT CTGCTGACAG CAGCAGATGT GGACAGCAAA 
GAAAACACTG AGAGACCGGC GCGCAAAAAC ACTGAATGGA GGGAACACAG AGCGCTGACT 
GGCATTTTAT TAGCTGTAGG TCTAGATGCC ACCTCAGCGC CGACTTTGGA AAGCCTTCTG 
TCCAAATCCT TCCTATCCAG AAAGTCGTCG GTCTGTAAGT CGACAGAGGC GCCGGACAGC 
GCTCACGGCT GGAACCTGTA TGTGATCAGC TCTGTGTCCA CACTGCAGCT CTACAGAGAA 
ATAGTGGAGT ACAGTAAGCG GTACGAGCAG TCCAACCCGT GTTCACAGAG CTGTGTTCAT 
CTGCTCAGTG AAGCTCATCT TCTTCTGCGG TCAGCGCTGC TTAAACTGCA GAACGGCCCT 
GCTGAGGAGA AGCAGGAGCT GCTGGAGGCC TTTCAGGAGA GCTGCGCTCA TTTAGGAGAC 
TGTTTCAGCA GGTTTGATAA GAAGGATTGT CATTTGGCTC TCCCATATTA TAAGATGTCG 
GGTCTCACTG TGACGGATGT TATTCAGAGG AACGTCTCCA TGAGTGGCGT ATCAAGCGGT 
TACGGCCGAG GATTCATCTT CTTCCTGAAG CATTCGCTGT ATGAGGAAAC CGTGGAGGAG 
CTGAGCAAGG ACGTGGCTGA TAAAGTACTG GAGATCTTCA GTGTTGCTGA ACCGGCTCAG 
CTTCCTCATG TTGTGTGCTG TTCATCAATG CTGAACGCGG ACCCTGATGG CGCCGGGGCC 
CTTCTGGAGC AGCTGGAGGC CTCCGGGGCC CCGTCCATCA CCCTGGCCCT CTGTAGAGCC 
TCACTAGCCC TGCGCACGGG AGACCGTCAC ACTTACAGCC AGCAGATGGA GCGCCACGCC 
GAGATGCTGC AGGTGTATGG CTTCATCGAA GAGCCCCGAC TGCTCCTGCA TGGTAGAGGT 
GTGGGTCTGA TGCCCACATT ACTGGCCCAG CAGCTGCGGG ACTCTCAGGA CGGGCTGCTG 
GTGGCGGCGC TCGTGGCCCT GCATGAGAAC AGCAGAATCA GCCTGGAGGA CGCACACCTC 
TTCTTCCAGG AGCTCTGTAA GGACCGTCTG GAGCCCGACA GCAGTCCGCA GTTATTGGTG 
GACTTTTGGG AGTCTCTGCT AGTGGCGTCG TCCCGTGAAT CCACCATCCA GGAGCTGCTG 
TTTCGGCTGG TGTCCGTCTA CATCAGCAGG ATAACATGCA GCCATCCCAG CGGCTGCAAG 
GCCCTCAAAA CTGCTGATGA CCTGATAAAC TCCTGCTCTC ATTATGGGAT GTTGTATCCG 
TGGGTGAGCA TCCTTACACC CAACCTATAC CATGACCAGC AGGAGGACCT GCTCAAACTA 
CAGTCTCTGC TGTGCGGGCC GACGCTGCAG GTCTCCTCTA TTCTGCCTCT GCTGGAGCCG 
CTGTCAGACT CCGATGACCC AGGACTTAGT GTTCATGTGC TCTGCTCCAC CAAACTGGGC 
CAGCATGAGG ACTCCATCCA CAGACTGCTG GACCGCTGCC CACAGGCCAT CATCCCATAC 
GCACAACACC AGCTGCACCA CCACACACTG TGTCTGTGGT GGCAGAAACT ATTCCCTGAG 
GTCTGTGACA GGATCAGGAA AACAGGAAAT GACAACACAA TCCTCCTCTC AGCTCTCAAA 
GAGACTCTGA TCGTAGCGGC GAGGGAACTG ACCCCATTAG AGTTTCTGGA TTTGCTGCCG 
GACGATGGAA CAGCTCATTT TTTCTTGCCA CATCTACTTG AATGCTGCCA GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005161916.1
CDS	127..3240
Translation	MVHVYNCHPFAAQRIVSAEQEPGLVCCGGGALFVVSAGGCKIEAFDLQREESPVICRFSCAGTVLSLQHSAVGDYLVTIEEKNNATYLRAYTNWRYQAVEKTRVGVRLLGHLLRGSSFRGAPKEQMEIIEIPLFEPPLCVACCSLTGDLLVGSAKSLVVFSLKRQTLSEQLSVLDFERVLILHIQGWSPSQVAFCAGYLALQTELEVLVIKLVQQQKSAQTAEENALLPVDIMVETSLEDDAEMKKDGFSPLHEQEDFFVFPKHQEMLGSEAQHCGITLVPECTAMDSESRGETTVVYVLFRRFAPDFFQGCSVEETRLHSLQLHPIFTGKQEESSISRCGDPDCMFVFFSLPNTGYMYSLKSSVELVSTYQYPEKAHQAVLSDQFLYVITRNALQCFTVRCSAVAARVQDPYIDTTMKACPPFSMEVCALRIQLFIGLKVLCQDGDHIVLLTAADVDSKENTERPARKNTEWREHRALTGILLAVGLDATSAPTLESLLSKSFLSRKSSVCKSTEAPDSAHGWNLYVISSVSTLQLYREIVEYSKRYEQSNPCSQSCVHLLSEAHLLLRSALLKLQNGPAEEKQELLEAFQESCAHLGDCFSRFDKKDCHLALPYYKMSGLTVTDVIQRNVSMSGVSSGYGRGFIFFLKHSLYEETVEELSKDVADKVLEIFSVAEPAQLPHVVCCSSMLNADPDGAGALLEQLEASGAPSITLALCRASLALRTGDRHTYSQQMERHAEMLQVYGFIEEPRLLLHGRGVGLMPTLLAQQLRDSQDGLLVAALVALHENSRISLEDAHLFFQELCKDRLEPDSSPQLLVDFWESLLVASSRESTIQELLFRLVSVYISRITCSHPSGCKALKTADDLINSCSHYGMLYPWVSILTPNLYHDQQEDLLKLQSLLCGPTLQVSSILPLLEPLSDSDDPGLSVHVLCSTKLGQHEDSIHRLLDRCPQAIIPYAQHQLHHHTLCLWWQKLFPEVCDRIRKTGNDNTILLSALKETLIVAARELTPLEFLDLLPDDGTAHFFLPHLLECCQ

Target ORF information:

RefSeq Version	XM_005161859.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio Hermansky-Pudlak syndrome 3 (hps3), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005161859.2

ORF Insert Sequence:

ATGGTCCACG TTTACAACTG CCACCCTTTC GCGGCGCAGC GGATCGTGTC GGCGGAGCAG 
GAGCCTGGGC TGGTGTGCTG CGGCGGCGGG GCGCTGTTCG TGGTGAGCGC TGGCGGCTGC 
AAGATAGAGG CGTTTGACCT GCAGCGGGAG GAGAGTCCGG TCATCTGCCG GTTCAGCTGC 
GCGGGGACCG TGCTCAGCCT GCAACACAGC GCCGTGGGGG ATTATCTTGT CACCATAGAA 
GAGAAGAACA ATGCCACGTA CCTGCGGGCC TACACTAACT GGAGGTACCA GGCCGTGGAG 
AAGACCCGAG TCGGGGTGCG TCTGCTGGGT CACCTCCTGC GCGGCTCGTC CTTCCGCGGA 
GCTCCTAAAG AGCAGATGGA GATCATAGAA ATCCCGCTGT TTGAGCCGCC GCTGTGTGTG 
GCCTGCTGCA GTCTCACCGG TGATCTTCTG GTGGGGAGTG CCAAGAGTCT GGTGGTCTTC 
AGTCTGAAGC GGCAGACTCT GAGCGAGCAG CTGTCGGTGC TGGACTTCGA GAGAGTTCTG 
ATACTGCATA TCCAGGGCTG GAGCCCATCT CAGGTGGCCT TTTGTGCGGG ATACCTGGCC 
CTGCAGACAG AGCTGGAGGT GCTGGTCATA AAGCTGGTCC AACAGCAGAA GAGTGCTCAG 
ACTGCTGAAG AAAACGCTCT GCTTCCTGTA GATATCATGG TGGAGACCAG CTTAGAGGAC 
GATGCAGAGA TGAAGAAAGA CGGCTTCAGC CCGCTCCATG AGCAGGAGGA CTTCTTTGTG 
TTTCCTAAGC ACCAGGAGAT GCTGGGTTCT GAAGCGCAGC ACTGCGGGAT CACTTTAGTC 
CCAGAGTGTA CAGCTATGGA CTCTGAAAGT CGAGGAGAAA CCACTGTGGT TTACGTTTTA 
TTCAGGAGGT TTGCGCCTGA TTTCTTCCAA GGCTGCAGCG TAGAGGAGAC ACGCTTGCAC 
TCCCTACAGC TCCACCCGAT ATTTACTGGT AAACAGGAAG AATCCTCCAT CTCCAGATGT 
GGGGATCCTG ATTGTATGTT TGTTTTCTTC TCCTTGCCCA ACACCGGCTA CATGTACAGC 
TTAAAGTCTT CAGTGGAGCT CGTGTCCACA TACCAGTACC CAGAAAAGGC CCACCAGGCT 
GTGCTTAGTG ACCAGTTCCT CTACGTCATC ACCAGGAACG CTCTGCAGTG TTTCACCGTC 
AGATGCAGTG CAGTAGCAGC TCGGGTTCAG GACCCCTACA TCGACACCAC CATGAAGGCC 
TGTCCGCCCT TCAGCATGGA GGTGTGCGCT CTGCGGATCC AGCTCTTTAT CGGCCTCAAG 
GTTCTCTGTC AGGATGGAGA TCATATCGTT CTGCTGACAG CAGCAGATGT GGACAGCAAA 
GAAAACACTG AGAGACCGGC GCGCAAAAAC ACTGAATGGA GGGAACACAG AGCGCTGACT 
GGCATTTTAT TAGCTGTAGG TCTAGATGCC ACCTCAGCGC CGACTTTGGA AAGCCTTCTG 
TCCAAATCCT TCCTATCCAG AAAGTCGTCG GTCTGTAAGT CGACAGAGGC GCCGGACAGC 
GCTCACGGCT GGAACCTGTA TGTGATCAGC TCTGTGTCCA CACTGCAGCT CTACAGAGAA 
ATAGTGGAGT ACAGTAAGCG GTACGAGCAG TCCAACCCGT GTTCACAGAG CTGTGTTCAT 
CTGCTCAGTG AAGCTCATCT TCTTCTGCGG TCAGCGCTGC TTAAACTGCA GAACGGCCCT 
GCTGAGGAGA AGCAGGAGCT GCTGGAGGCC TTTCAGGAGA GCTGCGCTCA TTTAGGAGAC 
TGTTTCAGCA GGTTTGATAA GAAGGATTGT CATTTGGCTC TCCCATATTA TAAGATGTCG 
GGTCTCACTG TGACGGATGT TATTCAGAGG AACGTCTCCA TGAGTGGCGT ATCAAGCGGT 
TACGGCCGAG GATTCATCTT CTTCCTGAAG CATTCGCTGT ATGAGGAAAC CGTGGAGGAG 
CTGAGCAAGG ACGTGGCTGA TAAAGTACTG GAGATCTTCA GTGTTGCTGA ACCGGCTCAG 
CTTCCTCATG TTGTGTGCTG TTCATCAATG CTGAACGCGG ACCCTGATGG CGCCGGGGCC 
CTTCTGGAGC AGCTGGAGGC CTCCGGGGCC CCGTCCATCA CCCTGGCCCT CTGTAGAGCC 
TCACTAGCCC TGCGCACGGG AGACCGTCAC ACTTACAGCC AGCAGATGGA GCGCCACGCC 
GAGATGCTGC AGGTGTATGG CTTCATCGAA GAGCCCCGAC TGCTCCTGCA TGGTAGAGGT 
GTGGGTCTGA TGCCCACATT ACTGGCCCAG CAGCTGCGGG ACTCTCAGGA CGGGCTGCTG 
GTGGCGGCGC TCGTGGCCCT GCATGAGAAC AGCAGAATCA GCCTGGAGGA CGCACACCTC 
TTCTTCCAGG AGCTCTGTAA GGACCGTCTG GAGCCCGACA GCAGTCCGCA GTTATTGGTG 
GACTTTTGGG AGTCTCTGCT AGTGGCGTCG TCCCGTGAAT CCACCATCCA GGAGCTGCTG 
TTTCGGCTGG TGTCCGTCTA CATCAGCAGG ATAACATGCA GCCATCCCAG CGGCTGCAAG 
GCCCTCAAAA CTGCTGATGA CCTGATAAAC TCCTGCTCTC ATTATGGGAT GTTGTATCCG 
TGGGTGAGCA TCCTTACACC CAACCTATAC CATGACCAGC AGGAGGACCT GCTCAAACTA 
CAGTCTCTGC TGTGCGGGCC GACGCTGCAG GTCTCCTCTA TTCTGCCTCT GCTGGAGCCG 
CTGTCAGACT CCGATGACCC AGGACTTAGT GTTCATGTGC TCTGCTCCAC CAAACTGGGC 
CAGCATGAGG ACTCCATCCA CAGACTGCTG GACCGCTGCC CACAGGCCAT CATCCCATAC 
GCACAACACC AGCTGCACCA CCACACACTG TGTCTGTGGT GGCAGAAACT ATTCCCTGAG 
GTCTGTGACA GGATCAGGAA AACAGGAAAT GACAACACAA TCCTCCTCTC AGCTCTCAAA 
GAGACTCTGA TCGTAGCGGC GAGGGAACTG ACCCCATTAG AGTTTCTGGA TTTGCTGCCG 
GACGATGGAA CAGCTCATTT TTTCTTGCCA CATCTACTTG AATGCTGCCA GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

snow white, a zebrafish model of Hermansky-Pudlak Syndrome type 5.
Genetics195(2)481-94(2013 Oct)
Daly CM,Willer J,Gregg R,Gross JM

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hps3 cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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