PAX2B cDNA ORF clone, Danio rerio(Zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	PAX2B
Entrez Gene ID	60638
Full Name	paired box 2b
Synonyms	pax2.2
General protein information	Preferred Names paired box 2b Names paired box 2b paired box gene 2b
Gene Type	protein-coding
Organism	Danio rerio(Zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_017358481.1	XP_017213970.1	paired box 2b isoform X1
NM_131640.1	NP_571715.1	paired box 2b
XM_017358482.1	XP_017213971.1	paired box 2b isoform X2
XM_017358484.1	XP_017213973.1	paired box 2b isoform X2

Pathways from BioSystems

Homologies

Bos taurus (cattle)	PAX2	XP_005225730.1
Danio rerio (zebrafish)	pax2a	NP_571259.1
Pan troglodytes (chimpanzee)	PAX2	XP_001168808.2
Canis lupus familiaris (dog)	PAX2	XP_005637679.1
Rattus norvegicus (Norway rat)	Pax2	NP_001099831.1
Danio rerio (zebrafish)	pax2b	NP_571715.1
Homo sapiens (human)	PAX2	NP_000269.2
	PAX2	XP_001108817.2
Mus musculus (house mouse)	Pax2	NP_035167.4
Gallus gallus (chicken)	PAX2	NP_990124.1

Gene Ontology
Bibliography

Related articles in PubMed

Molecular regionalization of the developing amphioxus neural tube challenges major partitions of the vertebrate brain.
Albuixech-Crespo B, L?pez-Blanch L, Burguera D, Maeso I, S?nchez-Arrones L, Moreno-Bravo JA, Somorjai I, Pascual-Anaya J, Puelles E, Bovolenta P, Garcia-Fern?ndez J, Puelles L, Irimia M, Ferran JL
PLoS biology15(4)e2001573(2017 Apr)

Transcriptomic, proteomic, and metabolomic landscape of positional memory in the caudal fin of zebrafish.
Rabinowitz JS, Robitaille AM, Wang Y, Ray CA, Thummel R, Gu H, Djukovic D, Raftery D, Berndt JD, Moon RT
Proceedings of the National Academy of Sciences of the United States of America114(5)E717-E726(2017 Jan)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

Evx1 and Evx2 specify excitatory neurotransmitter fates and suppress inhibitory fates through a Pax2-independent mechanism.
Ju?rez-Morales JL, Schulte CJ, Pezoa SA, Vallejo GK, Hilinski WC, England SJ, de Jager S, Lewis KE
Neural development115(2016 Feb)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

pax8 is initially required for normal otic induction, and subsequently pax8, pax2a and pax2b act redundantly to maintain otic fate
Title: Zebrafish pax8 is required for otic placode induction and plays a redundant role with Pax2 genes in the maintenance of the otic placode.

The following PAX2B gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PAX2B cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa03601	NM_131640.1 Latest version!	Danio rerio paired box 2b (pax2b), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
ODa54470	XM_017358481.1 Latest version!	Danio rerio paired box 2b (pax2b), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
ODa54471	XM_017358484.1 Latest version!	Danio rerio paired box 2b (pax2b), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
ODa54471	XM_017358482.1 Latest version!	Danio rerio paired box 2b (pax2b), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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All Other ORF Clones
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

PAX2B ( NM_131640.1 ) cDNA ORF clone, Danio rerio(Zebrafish) -> NP_571715.1 Danio rerio paired box 2b (pax2b), mRNA.

Price & Availability↑

CloneID	ODa03601
Clone ID Related Accession (Same CDS sequence)	NM_131640.1
Accession Version	NM_131640.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1161bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	paired box 2b
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF072547.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AF072547.1, BC162214.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA3505370, SAMEA3505371 [ECO:0000350] ##Evidence-Data-END##

ATGGATATTC ACTGTAAGGC AGACCCCTTC TCCGCCATGC ACCGGCACGG GGGAGTGAAC 
CAGCTGGGCG GGGTGTTCGT CAACGGGAGG CCTTTACCTG ACGTCGTGCG CCAGAGAATC 
GTGGAGCTCG CGCATCAGGG GGTCCGACCC TGCGACATAT CCCGACAGCT GAGGGTCAGT 
CACGGCTGCG TCAGCAAGAT CCTGGGCAGA TACTACGAGA CTGGCAGCAT AAAACCTGGA 
GTCATCGGAG GATCCAAGCC TAAAGTGGCC ACGCCGAAAG TGGTGGATAA AATAGCGGAC 
TACAAAAGAC AAAATCCCAC CATGTTCGCC TGGGAGATCC GGGACAGGCT GCTGGCGGAG 
GGCATCTGTG ATAACGACAC CGTCCCCAGT GTCTCCTCCA TAAACAGGAT CATCCGGACC 
AAGGTTCAGC AACCGTTTCA CCCTTCACCA GACGGGACGT CCCTCTCCAC CCCAGGACAC 
ACTATAATTC CCAGTACAGC GTCTCCTCCA GTCTCCAGCT CCTCCAATGA CCCCGTGGGC 
TCCTATTCAA TCAACGGCAT TCTGGGAATC CCTCGGTCTA ACGGAGAAAA GAGGAAACGA 
GATGCCGACG GGTCGGAGGG TTCTGCGCAG AGCAGTGATT CTCAGGGCAG TGTGGAGAGT 
CTGAGGAAAC ACCTGCGGGC CGATGCCTTC ACACAGCAGC AGCTGGAGGC TTTGGACCGA 
GTGTTCGAGA GACCCGCCTT TCCTGACGTC TTCCCTACAT CTGAACACAT CAAACCAGAG 
CAGGCGAGTG AATACAGCCT CCCTGCATTA AACACAGGCC TGGATGAAGT CAAACCCAGT 
TTATCGTCCA GCGCGGCCTC TGACCTCGGC GCCAGCGTGT CACAGAGCTA CCCTGTAGGG 
CGAGATATGG CCAACACAAC CTTACCTGGA TATCCACCTC ACGTCCCTCC GACAGGGCAG 
GGCAGCTATC CCACATCCAC ACTGGCTGGA ATGGTTCCTG GGAGCGAATT TTCAGGGAAT 
CCCTACAGCC ATCCACAGTA CACCACCTAC AATGAAGCCT GGAGATTCAG CAACCCAGCA 
ATACTGAGTT CCCCCTATTA TTATAGTGCA TCCAGAGGCT CCGCCCCCCC AACTGCTGCC 
ACTGCCTATG ACCGCCACTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_571715.1
CDS	447..1607
Translation	MDIHCKADPFSAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSINRIIRTKVQQPFHPSPDGTSLSTPGHTIIPSTASPPVSSSSNDPVGSYSINGILGIPRSNGEKRKRDADGSEGSAQSSDSQGSVESLRKHLRADAFTQQQLEALDRVFERPAFPDVFPTSEHIKPEQASEYSLPALNTGLDEVKPSLSSSAASDLGASVSQSYPVGRDMANTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTTYNEAWRFSNPAILSSPYYYSASRGSAPPTAATAYDRH

Target ORF information:

RefSeq Version	NM_131640.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio paired box 2b (pax2b), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_131640.1

ORF Insert Sequence:

ATGGATATTC ACTGTAAGGC AGACCCCTTC TCCGCCATGC ACCGGCACGG GGGAGTGAAC 
CAGCTGGGCG GGGTGTTCGT CAACGGGAGG CCTTTACCTG ACGTCGTGCG CCAGAGAATC 
GTGGAGCTCG CGCATCAGGG GGTCCGACCC TGCGACATAT CCCGACAGCT GAGGGTCAGT 
CACGGCTGCG TCAGCAAGAT CCTGGGCAGA TACTACGAGA CTGGCAGCAT AAAACCTGGA 
GTCATCGGAG GATCCAAGCC TAAAGTGGCC ACGCCGAAAG TGGTGGATAA AATAGCGGAC 
TACAAAAGAC AAAATCCCAC CATGTTCGCC TGGGAGATCC GGGACAGGCT GCTGGCGGAG 
GGCATCTGTG ATAACGACAC CGTCCCCAGT GTCTCCTCCA TAAACAGGAT CATCCGGACC 
AAGGTTCAGC AACCGTTTCA CCCTTCACCA GACGGGACGT CCCTCTCCAC CCCAGGACAC 
ACTATAATTC CCAGTACAGC GTCTCCTCCA GTCTCCAGCT CCTCCAATGA CCCCGTGGGC 
TCCTATTCAA TCAACGGCAT TCTGGGAATC CCTCGGTCTA ACGGAGAAAA GAGGAAACGA 
GATGCCGACG GGTCGGAGGG TTCTGCGCAG AGCAGTGATT CTCAGGGCAG TGTGGAGAGT 
CTGAGGAAAC ACCTGCGGGC CGATGCCTTC ACACAGCAGC AGCTGGAGGC TTTGGACCGA 
GTGTTCGAGA GACCCGCCTT TCCTGACGTC TTCCCTACAT CTGAACACAT CAAACCAGAG 
CAGGCGAGTG AATACAGCCT CCCTGCATTA AACACAGGCC TGGATGAAGT CAAACCCAGT 
TTATCGTCCA GCGCGGCCTC TGACCTCGGC GCCAGCGTGT CACAGAGCTA CCCTGTAGGG 
CGAGATATGG CCAACACAAC CTTACCTGGA TATCCACCTC ACGTCCCTCC GACAGGGCAG 
GGCAGCTATC CCACATCCAC ACTGGCTGGA ATGGTTCCTG GGAGCGAATT TTCAGGGAAT 
CCCTACAGCC ATCCACAGTA CACCACCTAC AATGAAGCCT GGAGATTCAG CAACCCAGCA 
ATACTGAGTT CCCCCTATTA TTATAGTGCA TCCAGAGGCT CCGCCCCCCC AACTGCTGCC 
ACTGCCTATG ACCGCCACTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PAX2B ( XM_017358481.1 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_017213970.1 Danio rerio paired box 2b (pax2b), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa54470
Clone ID Related Accession (Same CDS sequence)	XM_017358481.1
Accession Version	XM_017358481.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1206bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	paired box 2b isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.6) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGATATTC ACTGTAAGGC AGACCCCTTC TCCGCCATGC ACCGGCACGG GGGAGTGAAC 
CAGCTGGGCG GGGTGTTCGT CAACGGGAGG CCTTTACCTG ACGTCGTGCG CCAGAGAATC 
GTGGAGCTCG CGCATCAGGG GGTCCGACCC TGCGACATAT CCCGACAGCT GAGGGTCAGT 
CACGGCTGCG TCAGCAAGAT CCTGGGCAGA TACTACGAGA CTGGCAGCAT AAAACCTGGA 
GTCATCGGAG GATCCAAGCC TAAAGTGGCC ACGCCGAAAG TGGTGGATAA AATAGCGGAC 
TACAAAAGAC AAAATCCCAC CATGTTCGCC TGGGAGATCC GGGACAGGCT GCTGGCGGAG 
GGCATCTGTG ATAACGACAC CGTCCCCAGT GTCTCCTCCA TAAACAGGAT CATCCGGACC 
AAGGTTCAGC AACCGTTTCA CCCTTCACCA GACGGGACGT CCCTCTCCAC CCCAGGACAC 
ACTATAATTC CCAGTACAGC GTCTCCTCCA GTCTCCAGCT CCTCCAATGA CCCCGTGGGC 
TCCTATTCAA TCAACGGCAT TCTGGGAATC CCTCGGTCTA ACGGAGAAAA GAGGAAACGA 
GATGCCGACG GGTCGGAGGG TTCTGCGCAG AGCAGTGATT CTCAGGGCAG TGTGGAGAGT 
CTGAGGAAAC ACCTGCGGGC CGATGCCTTC ACACAGCAGC AGCTGGAGGC CCTGGACCGA 
GTGTTCGAGA GACCCGTCTT TCCTGACGTC TTCCCTACAT CTGAACACAT CAAACCAGAG 
CAGGCGAGTG AATACAGTCT CCCTGCATTA AACACAGGCC TGGATGAAGT CAAACCCAGT 
TTATCGTCCA GCGCGGCCTC TGACCTCGGC GCCAGTGTGT CACAGAGCTA CCCTGTAGGG 
CGAGATATGG CCAACACAAC CTTACCTGGA TATCCACCTC ACGTCCCTCC GACAGGGCAG 
GGCAGCTATG CCACATCCAC ACTGGCTGGA ATGGTTCCTG GGAGCGAATT TTCAGGGAAT 
CCCTACAGCC ATCCACAGTA CACCACCTAC AATGAAGCCT GGAGATTCAG CAACCCAGCA 
ATACTGATGC ATCCAGAGGC TCCGCCCCCC CAACTGCTGC CACTGCCTAT GACCGCCACT 
AGTTACCATG CCAACCAAAT GACCAGACAC GCCCACCAAC TCGGACTTCA TATTCTGCCA 
GTGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017213970.1
CDS	510..1715
Translation	MDIHCKADPFSAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSINRIIRTKVQQPFHPSPDGTSLSTPGHTIIPSTASPPVSSSSNDPVGSYSINGILGIPRSNGEKRKRDADGSEGSAQSSDSQGSVESLRKHLRADAFTQQQLEALDRVFERPVFPDVFPTSEHIKPEQASEYSLPALNTGLDEVKPSLSSSAASDLGASVSQSYPVGRDMANTTLPGYPPHVPPTGQGSYATSTLAGMVPGSEFSGNPYSHPQYTTYNEAWRFSNPAILMHPEAPPPQLLPLPMTATSYHANQMTRHAHQLGLHILPV

Target ORF information:

RefSeq Version	XM_017358481.1
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio paired box 2b (pax2b), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017358481.1

ORF Insert Sequence:

ATGGATATTC ACTGTAAGGC AGACCCCTTC TCCGCCATGC ACCGGCACGG GGGAGTGAAC 
CAGCTGGGCG GGGTGTTCGT CAACGGGAGG CCTTTACCTG ACGTCGTGCG CCAGAGAATC 
GTGGAGCTCG CGCATCAGGG GGTCCGACCC TGCGACATAT CCCGACAGCT GAGGGTCAGT 
CACGGCTGCG TCAGCAAGAT CCTGGGCAGA TACTACGAGA CTGGCAGCAT AAAACCTGGA 
GTCATCGGAG GATCCAAGCC TAAAGTGGCC ACGCCGAAAG TGGTGGATAA AATAGCGGAC 
TACAAAAGAC AAAATCCCAC CATGTTCGCC TGGGAGATCC GGGACAGGCT GCTGGCGGAG 
GGCATCTGTG ATAACGACAC CGTCCCCAGT GTCTCCTCCA TAAACAGGAT CATCCGGACC 
AAGGTTCAGC AACCGTTTCA CCCTTCACCA GACGGGACGT CCCTCTCCAC CCCAGGACAC 
ACTATAATTC CCAGTACAGC GTCTCCTCCA GTCTCCAGCT CCTCCAATGA CCCCGTGGGC 
TCCTATTCAA TCAACGGCAT TCTGGGAATC CCTCGGTCTA ACGGAGAAAA GAGGAAACGA 
GATGCCGACG GGTCGGAGGG TTCTGCGCAG AGCAGTGATT CTCAGGGCAG TGTGGAGAGT 
CTGAGGAAAC ACCTGCGGGC CGATGCCTTC ACACAGCAGC AGCTGGAGGC CCTGGACCGA 
GTGTTCGAGA GACCCGTCTT TCCTGACGTC TTCCCTACAT CTGAACACAT CAAACCAGAG 
CAGGCGAGTG AATACAGTCT CCCTGCATTA AACACAGGCC TGGATGAAGT CAAACCCAGT 
TTATCGTCCA GCGCGGCCTC TGACCTCGGC GCCAGTGTGT CACAGAGCTA CCCTGTAGGG 
CGAGATATGG CCAACACAAC CTTACCTGGA TATCCACCTC ACGTCCCTCC GACAGGGCAG 
GGCAGCTATG CCACATCCAC ACTGGCTGGA ATGGTTCCTG GGAGCGAATT TTCAGGGAAT 
CCCTACAGCC ATCCACAGTA CACCACCTAC AATGAAGCCT GGAGATTCAG CAACCCAGCA 
ATACTGATGC ATCCAGAGGC TCCGCCCCCC CAACTGCTGC CACTGCCTAT GACCGCCACT 
AGTTACCATG CCAACCAAAT GACCAGACAC GCCCACCAAC TCGGACTTCA TATTCTGCCA 
GTGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PAX2B ( XM_017358482.1 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_017213971.1 Danio rerio paired box 2b (pax2b), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ODa54471
Clone ID Related Accession (Same CDS sequence)	XM_017358482.1 , XM_017358484.1
Accession Version	XM_017358482.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1083bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	paired box 2b isoform X2
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.6) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGATATTC ACTGTAAGGC AGACCCCTTC TCCGCCATGC ACCGGCACGG GGGAGTGAAC 
CAGCTGGGCG GGGTGTTCGT CAACGGGAGG CCTTTACCTG ACGTCGTGCG CCAGAGAATC 
GTGGAGCTCG CGCATCAGGG GGTCCGACCC TGCGACATAT CCCGACAGCT GAGGGTCAGT 
CACGGCTGCG TCAGCAAGAT CCTGGGCAGA TACTACGAGA CTGGCAGCAT AAAACCTGGA 
GTCATCGGAG GATCCAAGCC TAAAGTGGCC ACGCCGAAAG TGGTGGATAA AATAGCGGAC 
TACAAAAGAC AAAATCCCAC CATGTTCGCC TGGGAGATCC GGGACAGGCT GCTGGCGGAG 
GGCATCTGTG ATAACGACAC CGTCCCCAGT GTCTCCTCCA TAAACAGGAT CATCCGGACC 
AAGGTTCAGC AACCGTTTCA CCCTTCACCA GACGGGACGT CCCTCTCCAC CCCAGGACAC 
ACTATAATTC CCAGTACAGC GTCTCCTCCA GTCTCCAGCT CCTCCAATGA CCCCGTGGGC 
TCCTATTCAA TCAACGGCAT TCTGGGAATC CCTCGGTCTA ACGGAGAAAA GAGGAAACGA 
GATGCCGACG GGTCGGAGGG TTCTGCGCAG AGCAGTGATT CTCAGGGCAG TGTGGAGAGT 
CTGAGGAAAC ACCTGCGGGC CGATGCCTTC ACACAGCAGC AGCTGGAGGC CCTGGACCGA 
GTGTTCGAGA GACCCGTCTT TCCTGACGTC TTCCCTACAT CTGAACACAT CAAACCAGAG 
CAGGCGAGTG AATACAGTCT CCCTGCATTA AACACAGGCC TGGATGAAGT CAAACCCAGT 
TTATCGTCCA GCGCGGCCTC TGACCTCGGC GCCAGTGTGT CACAGAGCTA CCCTGGCGAG 
ATATGGCCAA CACAACCTTA CCTGGATATC CACCTCACGT CCCTCCGACA GGGCAGGGCA 
GCTATGCCAC ATCCACACTG GCTGGAATGG TTCCTGGGAG CGAATTTTCA GGGAATCCCT 
ACAGCCATCC ACAGTACACC ACCTACAATG AAGCCTGGAG ATTCAGCAAC CCAGCAATAC 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017213971.1
CDS	510..1592
Translation	MDIHCKADPFSAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSINRIIRTKVQQPFHPSPDGTSLSTPGHTIIPSTASPPVSSSSNDPVGSYSINGILGIPRSNGEKRKRDADGSEGSAQSSDSQGSVESLRKHLRADAFTQQQLEALDRVFERPVFPDVFPTSEHIKPEQASEYSLPALNTGLDEVKPSLSSSAASDLGASVSQSYPGEIWPTQPYLDIHLTSLRQGRAAMPHPHWLEWFLGANFQGIPTAIHSTPPTMKPGDSATQQY

Target ORF information:

RefSeq Version	XM_017358482.1
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio paired box 2b (pax2b), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017358482.1

ORF Insert Sequence:

ATGGATATTC ACTGTAAGGC AGACCCCTTC TCCGCCATGC ACCGGCACGG GGGAGTGAAC 
CAGCTGGGCG GGGTGTTCGT CAACGGGAGG CCTTTACCTG ACGTCGTGCG CCAGAGAATC 
GTGGAGCTCG CGCATCAGGG GGTCCGACCC TGCGACATAT CCCGACAGCT GAGGGTCAGT 
CACGGCTGCG TCAGCAAGAT CCTGGGCAGA TACTACGAGA CTGGCAGCAT AAAACCTGGA 
GTCATCGGAG GATCCAAGCC TAAAGTGGCC ACGCCGAAAG TGGTGGATAA AATAGCGGAC 
TACAAAAGAC AAAATCCCAC CATGTTCGCC TGGGAGATCC GGGACAGGCT GCTGGCGGAG 
GGCATCTGTG ATAACGACAC CGTCCCCAGT GTCTCCTCCA TAAACAGGAT CATCCGGACC 
AAGGTTCAGC AACCGTTTCA CCCTTCACCA GACGGGACGT CCCTCTCCAC CCCAGGACAC 
ACTATAATTC CCAGTACAGC GTCTCCTCCA GTCTCCAGCT CCTCCAATGA CCCCGTGGGC 
TCCTATTCAA TCAACGGCAT TCTGGGAATC CCTCGGTCTA ACGGAGAAAA GAGGAAACGA 
GATGCCGACG GGTCGGAGGG TTCTGCGCAG AGCAGTGATT CTCAGGGCAG TGTGGAGAGT 
CTGAGGAAAC ACCTGCGGGC CGATGCCTTC ACACAGCAGC AGCTGGAGGC CCTGGACCGA 
GTGTTCGAGA GACCCGTCTT TCCTGACGTC TTCCCTACAT CTGAACACAT CAAACCAGAG 
CAGGCGAGTG AATACAGTCT CCCTGCATTA AACACAGGCC TGGATGAAGT CAAACCCAGT 
TTATCGTCCA GCGCGGCCTC TGACCTCGGC GCCAGTGTGT CACAGAGCTA CCCTGGCGAG 
ATATGGCCAA CACAACCTTA CCTGGATATC CACCTCACGT CCCTCCGACA GGGCAGGGCA 
GCTATGCCAC ATCCACACTG GCTGGAATGG TTCCTGGGAG CGAATTTTCA GGGAATCCCT 
ACAGCCATCC ACAGTACACC ACCTACAATG AAGCCTGGAG ATTCAGCAAC CCAGCAATAC 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PAX2B ( XM_017358484.1 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_017213973.1 Danio rerio paired box 2b (pax2b), transcript variant X3, mRNA.

Price & Availability↑

CloneID	ODa54471
Clone ID Related Accession (Same CDS sequence)	XM_017358482.1 , XM_017358484.1
Accession Version	XM_017358484.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1083bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	paired box 2b isoform X2
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.6) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGATATTC ACTGTAAGGC AGACCCCTTC TCCGCCATGC ACCGGCACGG GGGAGTGAAC 
CAGCTGGGCG GGGTGTTCGT CAACGGGAGG CCTTTACCTG ACGTCGTGCG CCAGAGAATC 
GTGGAGCTCG CGCATCAGGG GGTCCGACCC TGCGACATAT CCCGACAGCT GAGGGTCAGT 
CACGGCTGCG TCAGCAAGAT CCTGGGCAGA TACTACGAGA CTGGCAGCAT AAAACCTGGA 
GTCATCGGAG GATCCAAGCC TAAAGTGGCC ACGCCGAAAG TGGTGGATAA AATAGCGGAC 
TACAAAAGAC AAAATCCCAC CATGTTCGCC TGGGAGATCC GGGACAGGCT GCTGGCGGAG 
GGCATCTGTG ATAACGACAC CGTCCCCAGT GTCTCCTCCA TAAACAGGAT CATCCGGACC 
AAGGTTCAGC AACCGTTTCA CCCTTCACCA GACGGGACGT CCCTCTCCAC CCCAGGACAC 
ACTATAATTC CCAGTACAGC GTCTCCTCCA GTCTCCAGCT CCTCCAATGA CCCCGTGGGC 
TCCTATTCAA TCAACGGCAT TCTGGGAATC CCTCGGTCTA ACGGAGAAAA GAGGAAACGA 
GATGCCGACG GGTCGGAGGG TTCTGCGCAG AGCAGTGATT CTCAGGGCAG TGTGGAGAGT 
CTGAGGAAAC ACCTGCGGGC CGATGCCTTC ACACAGCAGC AGCTGGAGGC CCTGGACCGA 
GTGTTCGAGA GACCCGTCTT TCCTGACGTC TTCCCTACAT CTGAACACAT CAAACCAGAG 
CAGGCGAGTG AATACAGTCT CCCTGCATTA AACACAGGCC TGGATGAAGT CAAACCCAGT 
TTATCGTCCA GCGCGGCCTC TGACCTCGGC GCCAGTGTGT CACAGAGCTA CCCTGGCGAG 
ATATGGCCAA CACAACCTTA CCTGGATATC CACCTCACGT CCCTCCGACA GGGCAGGGCA 
GCTATGCCAC ATCCACACTG GCTGGAATGG TTCCTGGGAG CGAATTTTCA GGGAATCCCT 
ACAGCCATCC ACAGTACACC ACCTACAATG AAGCCTGGAG ATTCAGCAAC CCAGCAATAC 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017213973.1
CDS	510..1592
Translation	MDIHCKADPFSAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSINRIIRTKVQQPFHPSPDGTSLSTPGHTIIPSTASPPVSSSSNDPVGSYSINGILGIPRSNGEKRKRDADGSEGSAQSSDSQGSVESLRKHLRADAFTQQQLEALDRVFERPVFPDVFPTSEHIKPEQASEYSLPALNTGLDEVKPSLSSSAASDLGASVSQSYPGEIWPTQPYLDIHLTSLRQGRAAMPHPHWLEWFLGANFQGIPTAIHSTPPTMKPGDSATQQY

Target ORF information:

RefSeq Version	XM_017358484.1
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio paired box 2b (pax2b), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017358484.1

ORF Insert Sequence:

ATGGATATTC ACTGTAAGGC AGACCCCTTC TCCGCCATGC ACCGGCACGG GGGAGTGAAC 
CAGCTGGGCG GGGTGTTCGT CAACGGGAGG CCTTTACCTG ACGTCGTGCG CCAGAGAATC 
GTGGAGCTCG CGCATCAGGG GGTCCGACCC TGCGACATAT CCCGACAGCT GAGGGTCAGT 
CACGGCTGCG TCAGCAAGAT CCTGGGCAGA TACTACGAGA CTGGCAGCAT AAAACCTGGA 
GTCATCGGAG GATCCAAGCC TAAAGTGGCC ACGCCGAAAG TGGTGGATAA AATAGCGGAC 
TACAAAAGAC AAAATCCCAC CATGTTCGCC TGGGAGATCC GGGACAGGCT GCTGGCGGAG 
GGCATCTGTG ATAACGACAC CGTCCCCAGT GTCTCCTCCA TAAACAGGAT CATCCGGACC 
AAGGTTCAGC AACCGTTTCA CCCTTCACCA GACGGGACGT CCCTCTCCAC CCCAGGACAC 
ACTATAATTC CCAGTACAGC GTCTCCTCCA GTCTCCAGCT CCTCCAATGA CCCCGTGGGC 
TCCTATTCAA TCAACGGCAT TCTGGGAATC CCTCGGTCTA ACGGAGAAAA GAGGAAACGA 
GATGCCGACG GGTCGGAGGG TTCTGCGCAG AGCAGTGATT CTCAGGGCAG TGTGGAGAGT 
CTGAGGAAAC ACCTGCGGGC CGATGCCTTC ACACAGCAGC AGCTGGAGGC CCTGGACCGA 
GTGTTCGAGA GACCCGTCTT TCCTGACGTC TTCCCTACAT CTGAACACAT CAAACCAGAG 
CAGGCGAGTG AATACAGTCT CCCTGCATTA AACACAGGCC TGGATGAAGT CAAACCCAGT 
TTATCGTCCA GCGCGGCCTC TGACCTCGGC GCCAGTGTGT CACAGAGCTA CCCTGGCGAG 
ATATGGCCAA CACAACCTTA CCTGGATATC CACCTCACGT CCCTCCGACA GGGCAGGGCA 
GCTATGCCAC ATCCACACTG GCTGGAATGG TTCCTGGGAG CGAATTTTCA GGGAATCCCT 
ACAGCCATCC ACAGTACACC ACCTACAATG AAGCCTGGAG ATTCAGCAAC CCAGCAATAC 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Molecular regionalization of the developing amphioxus neural tube challenges major partitions of the vertebrate brain.
PLoS biology15(4)e2001573(2017 Apr)
Albuixech-Crespo B,L?pez-Blanch L,Burguera D,Maeso I,S?nchez-Arrones L,Moreno-Bravo JA,Somorjai I,Pascual-Anaya J,Puelles E,Bovolenta P,Garcia-Fern?ndez J,Puelles L,Irimia M,Ferran JL

Transcriptomic, proteomic, and metabolomic landscape of positional memory in the caudal fin of zebrafish.
Proceedings of the National Academy of Sciences of the United States of America114(5)E717-E726(2017 Jan)
Rabinowitz JS,Robitaille AM,Wang Y,Ray CA,Thummel R,Gu H,Djukovic D,Raftery D,Berndt JD,Moon RT

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

Evx1 and Evx2 specify excitatory neurotransmitter fates and suppress inhibitory fates through a Pax2-independent mechanism.
Neural development115(2016 Feb)
Ju?rez-Morales JL,Schulte CJ,Pezoa SA,Vallejo GK,Hilinski WC,England SJ,de Jager S,Lewis KE

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

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PAX2B cDNA ORF clone, Danio rerio(Zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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