hoxa4a cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	hoxa4a
Entrez Gene ID	58050
Full Name	homeobox A4a
Synonyms	hoxx4,hoxzf26,im:6899783,ns:zf-es36
General protein information	Preferred Names homeobox A4a Names homeobox protein Hox-A4a homeo box A4a homeobox gene X-4 homeobox protein Zf-26 zf-es36
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_021468133.1	XP_021323808.1	homeobox protein Hox-A4a isoform X2
NM_131535.1	NP_571610.1	homeobox protein Hox-A4a
XM_009294170.2	XP_009292445.1	homeobox protein Hox-A4a isoform X1
XM_021468132.1	XP_021323807.1	homeobox protein Hox-A4a isoform X2
XM_021468131.1	XP_021323806.1	homeobox protein Hox-A4a isoform X1
XM_009294170.3	XP_009292445.1	homeobox protein Hox-A4a isoform X2

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Vagus Motor Neuron Topographic Map Determined by Parallel Mechanisms of hox5 Expression and Time of Axon Initiation.
Barsh GR, Isabella AJ, Moens CB
Current biology : CB27(24)3812-3825.e3(2017 Dec)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

Phenotypic chemical screening using a zebrafish neural crest EMT reporter identifies retinoic acid as an inhibitor of epithelial morphogenesis.
Jimenez L, Wang J, Morrison MA, Whatcott C, Soh KK, Warner S, Bearss D, Jette CA, Stewart RA
Disease models & mechanisms9(4)389-400(2016 Apr)

Time point-based integrative analyses of deep-transcriptome identify four signal pathways in blastemal regeneration of zebrafish lower jaw.
Zhang H, Wang X, Lyu K, Gao S, Wang G, Fan C, Zhang XA, Yan J
Stem cells (Dayton, Ohio)33(3)806-18(2015 Mar)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

hoxb4a in combination with its paralogs hoxa4a and hoxd4a may play a significant role in the development of precerebellar, vagal, and pectoral fin neuronal subtypes
Title: Enhancer detection in zebrafish permits the identification of neuronal subtypes that express Hox4 paralogs.

The following hoxa4a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the hoxa4a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa03756	NM_131535.1 Latest version!	Danio rerio homeobox A4a (hoxa4a), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00
ODa24069	XM_021468133.1 Latest version!	Danio rerio homeobox A4a (hoxa4a), transcript variant X4, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00
ODa24069	XM_009294170.3 Latest version!	Danio rerio homeobox A4a (hoxa4a), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00
ODa24069	XM_021468132.1 Latest version!	Danio rerio homeobox A4a (hoxa4a), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00
ODa39358	XM_021468131.1 Latest version!	Danio rerio homeobox A4a (hoxa4a), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00
View Old Accession Versions >>
ODa24069	XM_009294170.2	Danio rerio homeobox A4a (hoxa4a), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00
Hide Old Accession Versions >>

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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2-4 Clone	40% OFF
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

hoxa4a ( NM_131535.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_571610.1 Danio rerio homeobox A4a (hoxa4a), mRNA.

Price & Availability↑

CloneID	ODa03756
Clone ID Related Accession (Same CDS sequence)	NM_131535.1
Accession Version	NM_131535.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 738bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-24
Organism	Danio rerio(zebrafish)
Product	homeobox protein Hox-A4a
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC122457.1. On or before Aug 28, 2006 this sequence version replaced XM_680783.1, XM_703073.1, XM_703074.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC122457.1, CT590652.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END##

ATGATCATGA GTTCCTACTT GATCAATTCA AATTACATCG AACCTTCTTT CCCACCCTGC 
GAGGAATATC ACCAGAACGG ATACATGCCC GTATCCTCTG ATTATTATGA ACGGCCGAAA 
GACCCGGGCT TCCCCCATCA CGAGGAGGCA TCATACCCGC GATCAAACTA CCAAGAGCAG 
AGCTATGATT ACGGTAATGT GTCAACCAAC GATCTCAACG ATTTCAGCGA CCGTCATCAC 
GCGCAACCTC AATCCGTTTC GCAGAATCAT GGACCCCGCC TCACCACAGA AAGCTGTGTG 
GGTTCGGATG GAAACAAGGA CTGTAGCCTC GTGTCAGACG CTCTCCCGGG CTCACAGAAG 
AGTAAAGAAC CAGTGGTGTA CCCCTGGATG AAAAAAGTCC ATGTTAATAC CGTGACCGCC 
AGCTACTCTG GAGGAGTGCC CAAGAGGTCT CGCACCGCCT ACACGCGCCA GCAGGCTCTT 
GAGCTTGAAA AAGAGTTCCA TTTTAACCGA TACCTGACTC GACGTCGACG TGTGGAGATA 
GCGCACACTA TGTGTCTTTC TGAGCGTCAG GTGAAAATCT GGTTTCAGAA CCGCCGCATG 
AAGTGGAAGA AAGACCACAA GCTGCCCAAT ACAAAGATCC GCTCCTCGAG CTCTGCACCC 
TCCAACCATC ACGTGAAAAC GGACGCCACT CAGCAGCAGC AAACGCTGCT TCCTACGCCG 
TGTTCCTCTA ACCTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_571610.1
CDS	58..795
Translation	MIMSSYLINSNYIEPSFPPCEEYHQNGYMPVSSDYYERPKDPGFPHHEEASYPRSNYQEQSYDYGNVSTNDLNDFSDRHHAQPQSVSQNHGPRLTTESCVGSDGNKDCSLVSDALPGSQKSKEPVVYPWMKKVHVNTVTASYSGGVPKRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKDHKLPNTKIRSSSSAPSNHHVKTDATQQQQTLLPTPCSSNL

Target ORF information:

RefSeq Version	NM_131535.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio homeobox A4a (hoxa4a), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_131535.1

ORF Insert Sequence:

ATGATCATGA GTTCCTACTT GATCAATTCA AATTACATCG AACCTTCTTT CCCACCCTGC 
GAGGAATATC ACCAGAACGG ATACATGCCC GTATCCTCTG ATTATTATGA ACGGCCGAAA 
GACCCGGGCT TCCCCCATCA CGAGGAGGCA TCATACCCGC GATCAAACTA CCAAGAGCAG 
AGCTATGATT ACGGTAATGT GTCAACCAAC GATCTCAACG ATTTCAGCGA CCGTCATCAC 
GCGCAACCTC AATCCGTTTC GCAGAATCAT GGACCCCGCC TCACCACAGA AAGCTGTGTG 
GGTTCGGATG GAAACAAGGA CTGTAGCCTC GTGTCAGACG CTCTCCCGGG CTCACAGAAG 
AGTAAAGAAC CAGTGGTGTA CCCCTGGATG AAAAAAGTCC ATGTTAATAC CGTGACCGCC 
AGCTACTCTG GAGGAGTGCC CAAGAGGTCT CGCACCGCCT ACACGCGCCA GCAGGCTCTT 
GAGCTTGAAA AAGAGTTCCA TTTTAACCGA TACCTGACTC GACGTCGACG TGTGGAGATA 
GCGCACACTA TGTGTCTTTC TGAGCGTCAG GTGAAAATCT GGTTTCAGAA CCGCCGCATG 
AAGTGGAAGA AAGACCACAA GCTGCCCAAT ACAAAGATCC GCTCCTCGAG CTCTGCACCC 
TCCAACCATC ACGTGAAAAC GGACGCCACT CAGCAGCAGC AAACGCTGCT TCCTACGCCG 
TGTTCCTCTA ACCTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

hoxa4a ( XM_021468133.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_021323808.1 Danio rerio homeobox A4a (hoxa4a), transcript variant X4, mRNA.

Price & Availability↑

CloneID	ODa24069
Clone ID Related Accession (Same CDS sequence)	XM_021468133.1 , XM_009294170.2 , XM_021468132.1 , XM_009294170.3
Accession Version	XM_021468133.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 381bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	homeobox protein Hox-A4a isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGACTGGA AACGCACCGA CCGGATTTAC TCGGGCGACC GAGGGCCAGC TCTTGTGACC 
GCCAGCTACT CTGGAGGAGT GCCCAAGAGG TCTCGCACCG CCTACACGCG CCAGCAGGCT 
CTTGAGCTTG AAAAAGAGTT CCATTTTAAC CGATACCTGA CTCGACGTCG ACGTGTGGAG 
ATAGCGCACA CTATGTGTCT TTCTGAGCGT CAGGTGAAAA TCTGGTTTCA GAACCGCCGC 
ATGAAGTGGA AGAAAGACCA CAAGCTGCCC AATACAAAGA TCCGCTCCTC GAGCTCTGCA 
CCCTCCAACC ATCACGTGAA AACGGACGCC ACTCAGCAGC AGCAAACGCT GCTTCCTACG 
CCGTGTTCCT CTAACCTATA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_021323808.1
CDS	333..713
Translation	MDWKRTDRIYSGDRGPALVTASYSGGVPKRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKDHKLPNTKIRSSSSAPSNHHVKTDATQQQQTLLPTPCSSNL

Target ORF information:

RefSeq Version	XM_021468133.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio homeobox A4a (hoxa4a), transcript variant X4, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_021468133.1

ORF Insert Sequence:

ATGGACTGGA AACGCACCGA CCGGATTTAC TCGGGCGACC GAGGGCCAGC TCTTGTGACC 
GCCAGCTACT CTGGAGGAGT GCCCAAGAGG TCTCGCACCG CCTACACGCG CCAGCAGGCT 
CTTGAGCTTG AAAAAGAGTT CCATTTTAAC CGATACCTGA CTCGACGTCG ACGTGTGGAG 
ATAGCGCACA CTATGTGTCT TTCTGAGCGT CAGGTGAAAA TCTGGTTTCA GAACCGCCGC 
ATGAAGTGGA AGAAAGACCA CAAGCTGCCC AATACAAAGA TCCGCTCCTC GAGCTCTGCA 
CCCTCCAACC ATCACGTGAA AACGGACGCC ACTCAGCAGC AGCAAACGCT GCTTCCTACG 
CCGTGTTCCT CTAACCTATA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

hoxa4a ( XM_009294170.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_009292445.1 Danio rerio homeobox A4a (hoxa4a), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa24069
Clone ID Related Accession (Same CDS sequence)	XM_021468133.1 , XM_009294170.2 , XM_021468132.1 , XM_009294170.3
Accession Version	XM_009294170.2	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 381bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	homeobox protein Hox-A4a isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009294170.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGACTGGA AACGCACCGA CCGGATTTAC TCGGGCGACC GAGGGCCAGC TCTTGTGACC 
GCCAGCTACT CTGGAGGAGT GCCCAAGAGG TCTCGCACCG CCTACACGCG CCAGCAGGCT 
CTTGAGCTTG AAAAAGAGTT CCATTTTAAC CGATACCTGA CTCGACGTCG ACGTGTGGAG 
ATAGCGCACA CTATGTGTCT TTCTGAGCGT CAGGTGAAAA TCTGGTTTCA GAACCGCCGC 
ATGAAGTGGA AGAAAGACCA CAAGCTGCCC AATACAAAGA TCCGCTCCTC GAGCTCTGCA 
CCCTCCAACC ATCACGTGAA AACGGACGCC ACTCAGCAGC AGCAAACGCT GCTTCCTACG 
CCGTGTTCCT CTAACCTATA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009292445.1
CDS	580..960
Translation	MDWKRTDRIYSGDRGPALVTASYSGGVPKRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKDHKLPNTKIRSSSSAPSNHHVKTDATQQQQTLLPTPCSSNL

Target ORF information:

RefSeq Version	XM_009294170.2
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio homeobox A4a (hoxa4a), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009294170.2

ORF Insert Sequence:

ATGGACTGGA AACGCACCGA CCGGATTTAC TCGGGCGACC GAGGGCCAGC TCTTGTGACC 
GCCAGCTACT CTGGAGGAGT GCCCAAGAGG TCTCGCACCG CCTACACGCG CCAGCAGGCT 
CTTGAGCTTG AAAAAGAGTT CCATTTTAAC CGATACCTGA CTCGACGTCG ACGTGTGGAG 
ATAGCGCACA CTATGTGTCT TTCTGAGCGT CAGGTGAAAA TCTGGTTTCA GAACCGCCGC 
ATGAAGTGGA AGAAAGACCA CAAGCTGCCC AATACAAAGA TCCGCTCCTC GAGCTCTGCA 
CCCTCCAACC ATCACGTGAA AACGGACGCC ACTCAGCAGC AGCAAACGCT GCTTCCTACG 
CCGTGTTCCT CTAACCTATA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

hoxa4a ( XM_021468132.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_021323807.1 Danio rerio homeobox A4a (hoxa4a), transcript variant X3, mRNA.

Price & Availability↑

CloneID	ODa24069
Clone ID Related Accession (Same CDS sequence)	XM_021468133.1 , XM_009294170.2 , XM_021468132.1 , XM_009294170.3
Accession Version	XM_021468132.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 381bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	homeobox protein Hox-A4a isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGACTGGA AACGCACCGA CCGGATTTAC TCGGGCGACC GAGGGCCAGC TCTTGTGACC 
GCCAGCTACT CTGGAGGAGT GCCCAAGAGG TCTCGCACCG CCTACACGCG CCAGCAGGCT 
CTTGAGCTTG AAAAAGAGTT CCATTTTAAC CGATACCTGA CTCGACGTCG ACGTGTGGAG 
ATAGCGCACA CTATGTGTCT TTCTGAGCGT CAGGTGAAAA TCTGGTTTCA GAACCGCCGC 
ATGAAGTGGA AGAAAGACCA CAAGCTGCCC AATACAAAGA TCCGCTCCTC GAGCTCTGCA 
CCCTCCAACC ATCACGTGAA AACGGACGCC ACTCAGCAGC AGCAAACGCT GCTTCCTACG 
CCGTGTTCCT CTAACCTATA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_021323807.1
CDS	337..717
Translation	MDWKRTDRIYSGDRGPALVTASYSGGVPKRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKDHKLPNTKIRSSSSAPSNHHVKTDATQQQQTLLPTPCSSNL

Target ORF information:

RefSeq Version	XM_021468132.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio homeobox A4a (hoxa4a), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_021468132.1

ORF Insert Sequence:

ATGGACTGGA AACGCACCGA CCGGATTTAC TCGGGCGACC GAGGGCCAGC TCTTGTGACC 
GCCAGCTACT CTGGAGGAGT GCCCAAGAGG TCTCGCACCG CCTACACGCG CCAGCAGGCT 
CTTGAGCTTG AAAAAGAGTT CCATTTTAAC CGATACCTGA CTCGACGTCG ACGTGTGGAG 
ATAGCGCACA CTATGTGTCT TTCTGAGCGT CAGGTGAAAA TCTGGTTTCA GAACCGCCGC 
ATGAAGTGGA AGAAAGACCA CAAGCTGCCC AATACAAAGA TCCGCTCCTC GAGCTCTGCA 
CCCTCCAACC ATCACGTGAA AACGGACGCC ACTCAGCAGC AGCAAACGCT GCTTCCTACG 
CCGTGTTCCT CTAACCTATA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

hoxa4a ( XM_009294170.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_009292445.1 Danio rerio homeobox A4a (hoxa4a), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ODa24069
Clone ID Related Accession (Same CDS sequence)	XM_021468133.1 , XM_009294170.2 , XM_021468132.1 , XM_009294170.3
Accession Version	XM_009294170.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 381bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	homeobox protein Hox-A4a isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_009294170.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGACTGGA AACGCACCGA CCGGATTTAC TCGGGCGACC GAGGGCCAGC TCTTGTGACC 
GCCAGCTACT CTGGAGGAGT GCCCAAGAGG TCTCGCACCG CCTACACGCG CCAGCAGGCT 
CTTGAGCTTG AAAAAGAGTT CCATTTTAAC CGATACCTGA CTCGACGTCG ACGTGTGGAG 
ATAGCGCACA CTATGTGTCT TTCTGAGCGT CAGGTGAAAA TCTGGTTTCA GAACCGCCGC 
ATGAAGTGGA AGAAAGACCA CAAGCTGCCC AATACAAAGA TCCGCTCCTC GAGCTCTGCA 
CCCTCCAACC ATCACGTGAA AACGGACGCC ACTCAGCAGC AGCAAACGCT GCTTCCTACG 
CCGTGTTCCT CTAACCTATA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009292445.1
CDS	618..998
Translation	MDWKRTDRIYSGDRGPALVTASYSGGVPKRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKDHKLPNTKIRSSSSAPSNHHVKTDATQQQQTLLPTPCSSNL

Target ORF information:

RefSeq Version	XM_009294170.3
Organism	Danio rerio(zebrafish)
Definition	Danio rerio homeobox A4a (hoxa4a), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009294170.3

ORF Insert Sequence:

ATGGACTGGA AACGCACCGA CCGGATTTAC TCGGGCGACC GAGGGCCAGC TCTTGTGACC 
GCCAGCTACT CTGGAGGAGT GCCCAAGAGG TCTCGCACCG CCTACACGCG CCAGCAGGCT 
CTTGAGCTTG AAAAAGAGTT CCATTTTAAC CGATACCTGA CTCGACGTCG ACGTGTGGAG 
ATAGCGCACA CTATGTGTCT TTCTGAGCGT CAGGTGAAAA TCTGGTTTCA GAACCGCCGC 
ATGAAGTGGA AGAAAGACCA CAAGCTGCCC AATACAAAGA TCCGCTCCTC GAGCTCTGCA 
CCCTCCAACC ATCACGTGAA AACGGACGCC ACTCAGCAGC AGCAAACGCT GCTTCCTACG 
CCGTGTTCCT CTAACCTATA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

hoxa4a ( XM_021468131.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_021323806.1 Danio rerio homeobox A4a (hoxa4a), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa39358
Clone ID Related Accession (Same CDS sequence)	XM_021468131.1
Accession Version	XM_021468131.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 645bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	homeobox protein Hox-A4a isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGACACTG AGTCACTAAG AGGTCAAACC GAAGTTATCT CTGTACAGCT ATTAAAGAAA 
GGTAGACAGA GCTGTTCTAT AGATGAGGAA CAGCACGTGG CGCACAGTTT AGTTAACATG 
AATATCAAGC TGACGTGGAT ATTTAAACAT GAGTTTTCAG CTCAGATTCA CTCAGATTTC 
TGGATTCACG ATATGGAAAT CCTGAGGAAA AAGAACTTAG AAACTACCTG TCACAAGAGG 
AATGCATCTT TATCTAGGCA GGGAACCTGG CGTAGTCTAT CAGCTGCAAA ATTGGCGATA 
TTTTGTTCAG TAACACAAGT GACCGCCAGC TACTCTGGAG GAGTGCCCAA GAGGTCTCGC 
ACCGCCTACA CGCGCCAGCA GGCTCTTGAG CTTGAAAAAG AGTTCCATTT TAACCGATAC 
CTGACTCGAC GTCGACGTGT GGAGATAGCG CACACTATGT GTCTTTCTGA GCGTCAGGTG 
AAAATCTGGT TTCAGAACCG CCGCATGAAG TGGAAGAAAG ACCACAAGCT GCCCAATACA 
AAGATCCGCT CCTCGAGCTC TGCACCCTCC AACCATCACG TGAAAACGGA CGCCACTCAG 
CAGCAGCAAA CGCTGCTTCC TACGCCGTGT TCCTCTAACC TATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_021323806.1
CDS	199..843
Translation	MDTESLRGQTEVISVQLLKKGRQSCSIDEEQHVAHSLVNMNIKLTWIFKHEFSAQIHSDFWIHDMEILRKKNLETTCHKRNASLSRQGTWRSLSAAKLAIFCSVTQVTASYSGGVPKRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKDHKLPNTKIRSSSSAPSNHHVKTDATQQQQTLLPTPCSSNL

Target ORF information:

RefSeq Version	XM_021468131.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio homeobox A4a (hoxa4a), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_021468131.1

ORF Insert Sequence:

ATGGACACTG AGTCACTAAG AGGTCAAACC GAAGTTATCT CTGTACAGCT ATTAAAGAAA 
GGTAGACAGA GCTGTTCTAT AGATGAGGAA CAGCACGTGG CGCACAGTTT AGTTAACATG 
AATATCAAGC TGACGTGGAT ATTTAAACAT GAGTTTTCAG CTCAGATTCA CTCAGATTTC 
TGGATTCACG ATATGGAAAT CCTGAGGAAA AAGAACTTAG AAACTACCTG TCACAAGAGG 
AATGCATCTT TATCTAGGCA GGGAACCTGG CGTAGTCTAT CAGCTGCAAA ATTGGCGATA 
TTTTGTTCAG TAACACAAGT GACCGCCAGC TACTCTGGAG GAGTGCCCAA GAGGTCTCGC 
ACCGCCTACA CGCGCCAGCA GGCTCTTGAG CTTGAAAAAG AGTTCCATTT TAACCGATAC 
CTGACTCGAC GTCGACGTGT GGAGATAGCG CACACTATGT GTCTTTCTGA GCGTCAGGTG 
AAAATCTGGT TTCAGAACCG CCGCATGAAG TGGAAGAAAG ACCACAAGCT GCCCAATACA 
AAGATCCGCT CCTCGAGCTC TGCACCCTCC AACCATCACG TGAAAACGGA CGCCACTCAG 
CAGCAGCAAA CGCTGCTTCC TACGCCGTGT TCCTCTAACC TATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Vagus Motor Neuron Topographic Map Determined by Parallel Mechanisms of hox5 Expression and Time of Axon Initiation.
Current biology : CB27(24)3812-3825.e3(2017 Dec)
Barsh GR,Isabella AJ,Moens CB

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

Phenotypic chemical screening using a zebrafish neural crest EMT reporter identifies retinoic acid as an inhibitor of epithelial morphogenesis.
Disease models & mechanisms9(4)389-400(2016 Apr)
Jimenez L,Wang J,Morrison MA,Whatcott C,Soh KK,Warner S,Bearss D,Jette CA,Stewart RA

Time point-based integrative analyses of deep-transcriptome identify four signal pathways in blastemal regeneration of zebrafish lower jaw.
Stem cells (Dayton, Ohio)33(3)806-18(2015 Mar)
Zhang H,Wang X,Lyu K,Gao S,Wang G,Fan C,Zhang XA,Yan J

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hoxa4a cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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