Gene Symbol | LOC565175 |
Entrez Gene ID | 565175 |
Full Name | uncharacterized LOC565175 |
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
ORF » Species Summary » Danio rerio » LOC565175 cDNA ORF clone
Gene Symbol | LOC565175 |
Entrez Gene ID | 565175 |
Full Name | uncharacterized LOC565175 |
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_001089407.1 | NP_001082876.1 | uncharacterized protein LOC565175 |
NM_001089407.2 | NP_001082876.2 | uncharacterized LOC565175 |
XM_017351948.2 | XP_017207437.1 | uncharacterized protein LOC565175 isoform X1 |
XM_021467674.1 | XP_021323349.1 | uncharacterized protein LOC565175 isoform X2 |
XM_017351948.1 | XP_017207437.1 | uncharacterized protein LOC565175 isoform X1 |
Mus musculus (house mouse) | 9330182L06Rik | NP_766294.2 |
Pan troglodytes (chimpanzee) | KIAA1324L | XP_527807.3 |
Canis lupus familiaris (dog) | KIAA1324L | XP_005628507.1 |
Bos taurus (cattle) | KIAA1324L | NP_001039703.2 |
Caenorhabditis elegans (roundworm) | CELE_Y73F8A.5 | NP_502841.1 |
Xenopus tropicalis (tropical clawed frog) | kiaa1324l | XP_002935291.1 |
Homo sapiens (human) | KIAA1324L | NP_001136221.1 |
Rattus norvegicus (Norway rat) | RGD1563349 | NP_001102815.1 |
KIAA1324L | XP_001095622.1 | |
Gallus gallus (chicken) | KIAA1324L | XP_416843.4 |
Danio rerio (zebrafish) | si:dkey-153k10.9 | NP_001038575.1 |
Danio rerio (zebrafish) | LOC565175 | NP_001082876.1 |
Eumetazoan cryptochrome phylogeny and evolution.
Haug MF, Gesemann M, Lazovi? V, Neuhauss SC
Genome biology and evolution7(2)601-19(2015 Jan)
15000 unique zebrafish EST clusters and their future use in microarray for profiling gene expression patterns during embryogenesis.
Lo J, Lee S, Xu M, Liu F, Ruan H, Eun A, He Y, Ma W, Wang W, Wen Z, Peng J
Genome research13(3)455-66(2003 Mar)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC565175 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC565175 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa149869 | |
Clone ID Related Accession (Same CDS sequence) | XM_021467674.1 | |
Accession Version | XM_021467674.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2991bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | uncharacterized protein LOC565175 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007129.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCGCA CGAGGAGCAT CATCGTCCGC CACAGAGAGC GTTTTATACG TAATTGTTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021323349.1 |
CDS | 52..3042 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021467674.1 |
1 | ATGGAGCGCA CGAGGAGCAT CATCGTCCGC CACAGAGAGC GTTTTATACG TAATTGTTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa159779 | |
Clone ID Related Accession (Same CDS sequence) | NM_001089407.2 | |
Accession Version | NM_001089407.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3033bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-03-21 | |
Organism | Danio rerio(zebrafish) | |
Product | uncharacterized LOC565175 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CT025776.18. On Oct 19, 2018 this sequence version replaced NM_001089407.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: GDQH01022147.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705, SAMN02951650 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGAGCGCA CGAGGAGCAT CATCGTCCGC CACAGAGAGC GTTTTATACG TAATTGTTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001082876.2 |
CDS | 78..3110 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001089407.2 |
1 | ATGGAGCGCA CGAGGAGCAT CATCGTCCGC CACAGAGAGC GTTTTATACG TAATTGTTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa55814 | |
Clone ID Related Accession (Same CDS sequence) | XM_017351948.2 , XM_017351948.1 | |
Accession Version | XM_017351948.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3042bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | uncharacterized protein LOC565175 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007129.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_017351948.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCGCA CGAGGAGCAT CATCGTCCGC CACAGAGAGC GTTTTATACG TAATTGTTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017207437.1 |
CDS | 52..3093 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017351948.2 |
1 | ATGGAGCGCA CGAGGAGCAT CATCGTCCGC CACAGAGAGC GTTTTATACG TAATTGTTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa55814 | |
Clone ID Related Accession (Same CDS sequence) | XM_017351948.2 , XM_017351948.1 | |
Accession Version | XM_017351948.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3042bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | uncharacterized protein LOC565175 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007129.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCGCA CGAGGAGCAT CATCGTCCGC CACAGAGAGC GTTTTATACG TAATTGTTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017207437.1 |
CDS | 52..3093 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017351948.1 |
1 | ATGGAGCGCA CGAGGAGCAT CATCGTCCGC CACAGAGAGC GTTTTATACG TAATTGTTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa01687 | |
Clone ID Related Accession (Same CDS sequence) | NM_001089407.1 | |
Accession Version | NM_001089407.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3033bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-07-02 | |
Organism | Danio rerio(zebrafish) | |
Product | uncharacterized protein LOC565175 | |
Comment | Comment: PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from BX248397.8. On May 24, 2007 this sequence version replaced XM_688460.2. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN01765705, SAMN02951650 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGAGCGCA CGAGGAGCAT CATCGTCCGC CACAGAGAGC GTTTTATACG GAATTGTTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001082876.1 |
CDS | 116..3148 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001089407.1 |
1 | ATGGAGCGCA CGAGGAGCAT CATCGTCCGC CACAGAGAGC GTTTTATACG GAATTGTTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Eumetazoan cryptochrome phylogeny and evolution. |
15000 unique zebrafish EST clusters and their future use in microarray for profiling gene expression patterns during embryogenesis. |