ORF » Species Summary » Danio rerio » scoca cDNA ORF clone

scoca cDNA ORF clone, Danio rerio(zebrafish)

  • Gene

  • Clones

  • gRNAs

The following scoca gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the scoca cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa38162 NM_001077559.1
Latest version!		 Danio rerio short coiled-coil protein a (scoca), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $104.30
$149.00
ODa05949 XM_005160004.4
Latest version!		 Danio rerio short coiled-coil protein a (scoca), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $104.30
$149.00
View Old Accession Versions >>
ODa05949 XM_005160004.3 Danio rerio short coiled-coil protein a (scoca), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $104.30
$149.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    scoca ( NM_001077559.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001071027.1 Danio rerio short coiled-coil protein a (scoca), mRNA.
    Price & Availability↑
    CloneID ODa38162
    Clone ID Related Accession (Same CDS sequence) NM_001077559.1
    Accession Version NM_001077559.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 360bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-01-19
    Organism Danio rerio(zebrafish)
    Product short coiled-coil protein A
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC124730.1. On or before Nov 9, 2006 this sequence version replaced XM_702579.1, XM_679736.1. ##Evidence-Data-START## Transcript exon combination :: BC124730.1, DV597596.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## 

    1
    61
    121
    181
    241
    301
    ATGGAGGGCG ACGTGGATGA AGATGATGGG ACTTTTACTA ACATCTCACT GGCTGATGAT 
    TCAGCTGACG GTGAACCTAC AGTCCTGCGC TTCAGATCAG AGGAGCAGTA CAGCACCATG 
    AACTGTGAGA TCGATGGAGA TATGGAGAAT CAAGTTGAGC AAGAGGAGAA AACAAGACTC 
    ATAAACCAAG TGTTGGAGCT TCAGCACACG TTAGAAGATC TCTCTGCACG TGTGGATGCG 
    GTTAAAGAGG AGAACCTTAA GCTTAAATCG GAGAACCAGG TTCTTGGGCA GTACATCGAG 
    AACCTCATGT CCGCCTCAAG TGTGTTTCAG ACCACCGACA CCAAAAGCAA ACGGAAATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001071027.1
    CDS124..483
    Translation

    Target ORF information:

    RefSeq Version NM_001077559.1
    Organism Danio rerio(zebrafish)
    Definition Danio rerio short coiled-coil protein a (scoca), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001077559.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    ATGGAGGGCG ACGTGGATGA AGATGATGGG ACTTTTACTA ACATCTCACT GGCTGATGAT 
    TCAGCTGACG GTGAACCTAC AGTCCTGCGC TTCAGATCAG AGGAGCAGTA CAGCACCATG 
    AACTGTGAGA TCGATGGAGA TATGGAGAAT CAAGTTGAGC AAGAGGAGAA AACAAGACTC 
    ATAAACCAAG TGTTGGAGCT TCAGCACACG TTAGAAGATC TCTCTGCACG TGTGGATGCG 
    GTTAAAGAGG AGAACCTTAA GCTTAAATCG GAGAACCAGG TTCTTGGGCA GTACATCGAG 
    AACCTCATGT CCGCCTCAAG TGTGTTTCAG ACCACCGACA CCAAAAGCAA ACGGAAATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    scoca ( XM_005160004.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005160061.1 Danio rerio short coiled-coil protein a (scoca), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID ODa05949
    Clone ID Related Accession (Same CDS sequence) XM_005160004.3 , XM_005160004.4
    Accession Version XM_005160004.3 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 243bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-06-23
    Organism Danio rerio(Zebrafish)
    Product short coiled-coil protein A isoform X1
    Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007112.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005160004.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    ATGAACTGTG AGATCGATGG AGATATGGAG AATCAAGTTG AGCAAGAGGA GAAAACAAGA 
    CTCATAAACC AAGTGTTGGA GCTTCAGCAC ACGTTAGAAG ATCTCTCTGC ACGTGTGGAT 
    GCGGTTAAAG AGGAGAACCT TAAGCTTAAA TCGGAGAACC AGGTTCTTGG GCAGTACATC 
    GAGAACCTCA TGTCCGCCTC AAGTGTGTTT CAGACCACCG ACACCAAAAG CAAACGGAAA 
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_005160061.1
    CDS343..585
    Translation

    Target ORF information:

    RefSeq Version XM_005160004.3
    Organism Danio rerio(Zebrafish)
    Definition Danio rerio short coiled-coil protein a (scoca), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_005160004.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    ATGAACTGTG AGATCGATGG AGATATGGAG AATCAAGTTG AGCAAGAGGA GAAAACAAGA 
    CTCATAAACC AAGTGTTGGA GCTTCAGCAC ACGTTAGAAG ATCTCTCTGC ACGTGTGGAT 
    GCGGTTAAAG AGGAGAACCT TAAGCTTAAA TCGGAGAACC AGGTTCTTGG GCAGTACATC 
    GAGAACCTCA TGTCCGCCTC AAGTGTGTTT CAGACCACCG ACACCAAAAG CAAACGGAAA 
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    scoca ( XM_005160004.4 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005160061.1 Danio rerio short coiled-coil protein a (scoca), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID ODa05949
    Clone ID Related Accession (Same CDS sequence) XM_005160004.3 , XM_005160004.4
    Accession Version XM_005160004.4 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 243bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-14
    Organism Danio rerio(zebrafish)
    Product short coiled-coil protein A isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007112.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005160004.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    ATGAACTGTG AGATCGATGG AGATATGGAG AATCAAGTTG AGCAAGAGGA GAAAACAAGA 
    CTCATAAACC AAGTGTTGGA GCTTCAGCAC ACGTTAGAAG ATCTCTCTGC ACGTGTGGAT 
    GCGGTTAAAG AGGAGAACCT TAAGCTTAAA TCGGAGAACC AGGTTCTTGG GCAGTACATC 
    GAGAACCTCA TGTCCGCCTC AAGTGTGTTT CAGACCACCG ACACCAAAAG CAAACGGAAA 
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_005160061.1
    CDS239..481
    Translation

    Target ORF information:

    RefSeq Version XM_005160004.4
    Organism Danio rerio(zebrafish)
    Definition Danio rerio short coiled-coil protein a (scoca), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_005160004.4

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    ATGAACTGTG AGATCGATGG AGATATGGAG AATCAAGTTG AGCAAGAGGA GAAAACAAGA 
    CTCATAAACC AAGTGTTGGA GCTTCAGCAC ACGTTAGAAG ATCTCTCTGC ACGTGTGGAT 
    GCGGTTAAAG AGGAGAACCT TAAGCTTAAA TCGGAGAACC AGGTTCTTGG GCAGTACATC 
    GAGAACCTCA TGTCCGCCTC AAGTGTGTTT CAGACCACCG ACACCAAAAG CAAACGGAAA 
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    RFX transcription factors are essential for hearing in mice.
    Nature communications68549(2015 Oct)
    Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R


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