ORF » Species Summary » Danio rerio » SYPA cDNA ORF clone

SYPA cDNA ORF clone, Danio rerio(Zebrafish)

  • Gene

  • Clones

  • gRNAs

The following SYPA gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SYPA cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa14225 NM_001143977.1
Latest version!		 Danio rerio synaptophysin a (sypa), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
ODa14225 XM_005167042.4
Latest version!		 Danio rerio synaptophysin a (sypa), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
View Old Accession Versions >>
ODa14225 XM_005167042.3 Danio rerio synaptophysin a (sypa), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    SYPA ( NM_001143977.1 ) cDNA ORF clone, Danio rerio(Zebrafish) -> NP_001137449.1 Danio rerio synaptophysin a (sypa), mRNA.
    Price & Availability↑
    CloneID ODa14225
    Clone ID Related Accession (Same CDS sequence) XM_005167042.4 , NM_001143977.1 , XM_005167042.3
    Accession Version NM_001143977.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 885bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-01-26
    Organism Danio rerio(zebrafish)
    Product synaptophysin
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX072561.8 and BX649575.18. On Jan 22, 2009 this sequence version replaced XM_683061.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: DN857308.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGATATTG CAAATCAGTT GGTTGCCCAG GGGCAGTTCA GGGTGCTGAA AGTCCCATTG 
    GGCTTCATCA AAATCTTAGA ATGGGTGTTT GCCATCTTTG CGTTCTCCAC CTGTGGGAGT 
    TACTCCGGCT CCTTCAGGAT GAGCGTGGAG TGCAAGAACA GATCCGACAG TAACCTGAAA 
    ATAGACGTGG ACTTTGAGTA TCCCTTCAGG CTCCATCAAG TGTATTTCAA CGCTCCTACC 
    TGCAAGAATG GCCAGTCCGA TCGTTTCTTC CTGGTTGGTG ATTACTCCTC TTCAGCAGAG 
    TTCTTCGTCA CCATCGCCGT TTTTGCATTT CTGTACTCCA TGGCAGCTCT CAGCATCTAC 
    ATATTTGCCT TTGAGAAGTA CAGAGAGAAC AATAAAGGAC CACTAATCGA TTTCGGTGTG 
    ACATGCGTAT TCACCTTCAT GTGGCTGGTG AGCTCGGCAG CCTGGGCTAA GGGCTTGTCG 
    GATGTCAAGA CGGCTACTGA CCCAGAGAAG GTTCTGGATC TGATCCCTGC CTGTGAAAAC 
    AGTGGCAACC GATGCCGTGA AGTTTACGAC CCTGTCATGT CTGGTCTTAA TACTTCTGTC 
    GTCTTTGGCT TCCTGAACCT GATCTTGTGG ACGGGTAACC TGTGGTTTGT GTTCAAGGAG 
    ACTGGGATCG TGGCACCGTT TATGCGCCAG CAGCCTGCCC AGGAGAAGCA GCCCGCCCCT 
    GACTCCTACG GACAGGCAGG TTACGGGCAG CAGGACCCGT ATGCCGGTTC CCAGGGAGGC 
    TACCAGCCCG ACTACAGCCA GCAAGGCTAC AATCAGGGTG GAGACTACGG CCAGGGCGGA 
    TATGAACAGC AGGGGGCACC CACCTCCTTT TCCAACCAGA TGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001137449.1
    CDS11..895
    Translation

    Target ORF information:

    RefSeq Version NM_001143977.1
    Organism Danio rerio(zebrafish)
    Definition Danio rerio synaptophysin a (sypa), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001143977.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGATATTG CAAATCAGTT GGTTGCCCAG GGGCAGTTCA GGGTGCTGAA AGTCCCATTG 
    GGCTTCATCA AAATCTTAGA ATGGGTGTTT GCCATCTTTG CGTTCTCCAC CTGTGGGAGT 
    TACTCCGGCT CCTTCAGGAT GAGCGTGGAG TGCAAGAACA GATCCGACAG TAACCTGAAA 
    ATAGACGTGG ACTTTGAGTA TCCCTTCAGG CTCCATCAAG TGTATTTCAA CGCTCCTACC 
    TGCAAGAATG GCCAGTCCGA TCGTTTCTTC CTGGTTGGTG ATTACTCCTC TTCAGCAGAG 
    TTCTTCGTCA CCATCGCCGT TTTTGCATTT CTGTACTCCA TGGCAGCTCT CAGCATCTAC 
    ATATTTGCCT TTGAGAAGTA CAGAGAGAAC AATAAAGGAC CACTAATCGA TTTCGGTGTG 
    ACATGCGTAT TCACCTTCAT GTGGCTGGTG AGCTCGGCAG CCTGGGCTAA GGGCTTGTCG 
    GATGTCAAGA CGGCTACTGA CCCAGAGAAG GTTCTGGATC TGATCCCTGC CTGTGAAAAC 
    AGTGGCAACC GATGCCGTGA AGTTTACGAC CCTGTCATGT CTGGTCTTAA TACTTCTGTC 
    GTCTTTGGCT TCCTGAACCT GATCTTGTGG ACGGGTAACC TGTGGTTTGT GTTCAAGGAG 
    ACTGGGATCG TGGCACCGTT TATGCGCCAG CAGCCTGCCC AGGAGAAGCA GCCCGCCCCT 
    GACTCCTACG GACAGGCAGG TTACGGGCAG CAGGACCCGT ATGCCGGTTC CCAGGGAGGC 
    TACCAGCCCG ACTACAGCCA GCAAGGCTAC AATCAGGGTG GAGACTACGG CCAGGGCGGA 
    TATGAACAGC AGGGGGCACC CACCTCCTTT TCCAACCAGA TGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    SYPA ( XM_005167042.4 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_005167099.1 Danio rerio synaptophysin a (sypa), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID ODa14225
    Clone ID Related Accession (Same CDS sequence) XM_005167042.4 , NM_001143977.1 , XM_005167042.3
    Accession Version XM_005167042.4 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 885bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-14
    Organism Danio rerio(zebrafish)
    Product synaptophysin isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007119.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005167042.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGATATTG CAAATCAGTT GGTTGCCCAG GGGCAGTTCA GGGTGCTGAA AGTCCCATTG 
    GGCTTCATCA AAATCTTAGA ATGGGTGTTT GCCATCTTTG CGTTCTCCAC CTGTGGGAGT 
    TACTCCGGCT CCTTCAGGAT GAGCGTGGAG TGCAAGAACA GATCCGACAG TAACCTGAAA 
    ATAGACGTGG ACTTTGAGTA TCCCTTCAGG CTCCATCAAG TGTATTTCAA CGCTCCTACC 
    TGCAAGAATG GCCAGTCCGA TCGTTTCTTC CTGGTTGGTG ATTACTCCTC TTCAGCAGAG 
    TTCTTCGTCA CCATCGCCGT TTTTGCATTT CTGTACTCCA TGGCAGCTCT CAGCATCTAC 
    ATATTTGCCT TTGAGAAGTA CAGAGAGAAC AATAAAGGAC CACTAATCGA TTTCGGTGTG 
    ACATGCGTAT TCACCTTCAT GTGGCTGGTG AGCTCGGCAG CCTGGGCTAA GGGCTTGTCG 
    GATGTCAAGA CGGCTACTGA CCCAGAGAAG GTTCTGGATC TGATCCCTGC CTGTGAAAAC 
    AGTGGCAACC GATGCCGTGA AGTTTACGAC CCTGTCATGT CTGGTCTTAA TACTTCTGTC 
    GTCTTTGGCT TCCTGAACCT GATCTTGTGG ACGGGTAACC TGTGGTTTGT GTTCAAGGAG 
    ACTGGGATCG TGGCACCGTT TATGCGCCAG CAGCCTGCCC AGGAGAAGCA GCCCGCCCCT 
    GACTCCTACG GACAGGCAGG TTACGGGCAG CAGGACCCGT ATGCCGGTTC CCAGGGAGGC 
    TACCAGCCCG ACTACAGCCA GCAAGGCTAC AATCAGGGTG GAGACTACGG CCAGGGCGGA 
    TATGAACAGC AGGGGGCACC CACCTCCTTT TCCAACCAGA TGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_005167099.1
    CDS97..981
    Translation

    Target ORF information:

    RefSeq Version XM_005167042.4
    Organism Danio rerio(zebrafish)
    Definition Danio rerio synaptophysin a (sypa), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_005167042.4

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGATATTG CAAATCAGTT GGTTGCCCAG GGGCAGTTCA GGGTGCTGAA AGTCCCATTG 
    GGCTTCATCA AAATCTTAGA ATGGGTGTTT GCCATCTTTG CGTTCTCCAC CTGTGGGAGT 
    TACTCCGGCT CCTTCAGGAT GAGCGTGGAG TGCAAGAACA GATCCGACAG TAACCTGAAA 
    ATAGACGTGG ACTTTGAGTA TCCCTTCAGG CTCCATCAAG TGTATTTCAA CGCTCCTACC 
    TGCAAGAATG GCCAGTCCGA TCGTTTCTTC CTGGTTGGTG ATTACTCCTC TTCAGCAGAG 
    TTCTTCGTCA CCATCGCCGT TTTTGCATTT CTGTACTCCA TGGCAGCTCT CAGCATCTAC 
    ATATTTGCCT TTGAGAAGTA CAGAGAGAAC AATAAAGGAC CACTAATCGA TTTCGGTGTG 
    ACATGCGTAT TCACCTTCAT GTGGCTGGTG AGCTCGGCAG CCTGGGCTAA GGGCTTGTCG 
    GATGTCAAGA CGGCTACTGA CCCAGAGAAG GTTCTGGATC TGATCCCTGC CTGTGAAAAC 
    AGTGGCAACC GATGCCGTGA AGTTTACGAC CCTGTCATGT CTGGTCTTAA TACTTCTGTC 
    GTCTTTGGCT TCCTGAACCT GATCTTGTGG ACGGGTAACC TGTGGTTTGT GTTCAAGGAG 
    ACTGGGATCG TGGCACCGTT TATGCGCCAG CAGCCTGCCC AGGAGAAGCA GCCCGCCCCT 
    GACTCCTACG GACAGGCAGG TTACGGGCAG CAGGACCCGT ATGCCGGTTC CCAGGGAGGC 
    TACCAGCCCG ACTACAGCCA GCAAGGCTAC AATCAGGGTG GAGACTACGG CCAGGGCGGA 
    TATGAACAGC AGGGGGCACC CACCTCCTTT TCCAACCAGA TGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    SYPA ( XM_005167042.3 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_005167099.1 Danio rerio synaptophysin a (sypa), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID ODa14225
    Clone ID Related Accession (Same CDS sequence) XM_005167042.4 , NM_001143977.1 , XM_005167042.3
    Accession Version XM_005167042.3 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 885bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-06-23
    Organism Danio rerio(Zebrafish)
    Product synaptophysin isoform X1
    Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007119.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005167042.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGATATTG CAAATCAGTT GGTTGCCCAG GGGCAGTTCA GGGTGCTGAA AGTCCCATTG 
    GGCTTCATCA AAATCTTAGA ATGGGTGTTT GCCATCTTTG CGTTCTCCAC CTGTGGGAGT 
    TACTCCGGCT CCTTCAGGAT GAGCGTGGAG TGCAAGAACA GATCCGACAG TAACCTGAAA 
    ATAGACGTGG ACTTTGAGTA TCCCTTCAGG CTCCATCAAG TGTATTTCAA CGCTCCTACC 
    TGCAAGAATG GCCAGTCCGA TCGTTTCTTC CTGGTTGGTG ATTACTCCTC TTCAGCAGAG 
    TTCTTCGTCA CCATCGCCGT TTTTGCATTT CTGTACTCCA TGGCAGCTCT CAGCATCTAC 
    ATATTTGCCT TTGAGAAGTA CAGAGAGAAC AATAAAGGAC CACTAATCGA TTTCGGTGTG 
    ACATGCGTAT TCACCTTCAT GTGGCTGGTG AGCTCGGCAG CCTGGGCTAA GGGCTTGTCG 
    GATGTCAAGA CGGCTACTGA CCCAGAGAAG GTTCTGGATC TGATCCCTGC CTGTGAAAAC 
    AGTGGCAACC GATGCCGTGA AGTTTACGAC CCTGTCATGT CTGGTCTTAA TACTTCTGTC 
    GTCTTTGGCT TCCTGAACCT GATCTTGTGG ACGGGTAACC TGTGGTTTGT GTTCAAGGAG 
    ACTGGGATCG TGGCACCGTT TATGCGCCAG CAGCCTGCCC AGGAGAAGCA GCCCGCCCCT 
    GACTCCTACG GACAGGCAGG TTACGGGCAG CAGGACCCGT ATGCCGGTTC CCAGGGAGGC 
    TACCAGCCCG ACTACAGCCA GCAAGGCTAC AATCAGGGTG GAGACTACGG CCAGGGCGGA 
    TATGAACAGC AGGGGGCACC CACCTCCTTT TCCAACCAGA TGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_005167099.1
    CDS104..988
    Translation

    Target ORF information:

    RefSeq Version XM_005167042.3
    Organism Danio rerio(Zebrafish)
    Definition Danio rerio synaptophysin a (sypa), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_005167042.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGATATTG CAAATCAGTT GGTTGCCCAG GGGCAGTTCA GGGTGCTGAA AGTCCCATTG 
    GGCTTCATCA AAATCTTAGA ATGGGTGTTT GCCATCTTTG CGTTCTCCAC CTGTGGGAGT 
    TACTCCGGCT CCTTCAGGAT GAGCGTGGAG TGCAAGAACA GATCCGACAG TAACCTGAAA 
    ATAGACGTGG ACTTTGAGTA TCCCTTCAGG CTCCATCAAG TGTATTTCAA CGCTCCTACC 
    TGCAAGAATG GCCAGTCCGA TCGTTTCTTC CTGGTTGGTG ATTACTCCTC TTCAGCAGAG 
    TTCTTCGTCA CCATCGCCGT TTTTGCATTT CTGTACTCCA TGGCAGCTCT CAGCATCTAC 
    ATATTTGCCT TTGAGAAGTA CAGAGAGAAC AATAAAGGAC CACTAATCGA TTTCGGTGTG 
    ACATGCGTAT TCACCTTCAT GTGGCTGGTG AGCTCGGCAG CCTGGGCTAA GGGCTTGTCG 
    GATGTCAAGA CGGCTACTGA CCCAGAGAAG GTTCTGGATC TGATCCCTGC CTGTGAAAAC 
    AGTGGCAACC GATGCCGTGA AGTTTACGAC CCTGTCATGT CTGGTCTTAA TACTTCTGTC 
    GTCTTTGGCT TCCTGAACCT GATCTTGTGG ACGGGTAACC TGTGGTTTGT GTTCAAGGAG 
    ACTGGGATCG TGGCACCGTT TATGCGCCAG CAGCCTGCCC AGGAGAAGCA GCCCGCCCCT 
    GACTCCTACG GACAGGCAGG TTACGGGCAG CAGGACCCGT ATGCCGGTTC CCAGGGAGGC 
    TACCAGCCCG ACTACAGCCA GCAAGGCTAC AATCAGGGTG GAGACTACGG CCAGGGCGGA 
    TATGAACAGC AGGGGGCACC CACCTCCTTT TCCAACCAGA TGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

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