macroh2a2 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	macroh2a2
Entrez Gene ID	558711
Full Name	H2A histone family, member Y2
Synonyms	im:6898017,wu:fa14g05,zgc:114051
General protein information	Preferred Names H2A histone family, member Y2 Names H2A histone family, member Y-like H2A2
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_009307097.1	XP_009305372.1	H2A histone family, member Y-like isoform X1
NM_001025502.1	NP_001020673.1	H2A histone family, member Y-like

Pathways from BioSystems

Homologies

Homo sapiens (human)	H2AFY2	NP_061119.1
Danio rerio (zebrafish)	LOC100536875	XP_003199740.1
Pan troglodytes (chimpanzee)	H2AFY2	XP_001170543.2
Bos taurus (cattle)	H2AFY2	NP_001069554.1
Xenopus tropicalis (tropical clawed frog)	h2afy2	NP_001006925.1
	H2AFY2	XP_001109237.2
Mus musculus (house mouse)	H2afy2	NP_996883.1
Danio rerio (zebrafish)	h2afy2	NP_001020673.1
Canis lupus familiaris (dog)	H2AFY2	XP_861204.1
Rattus norvegicus (Norway rat)	H2afy2	NP_001129279.1
Gallus gallus (chicken)	H2AFY2	NP_001264267.1

Gene Ontology
Bibliography

Related articles in PubMed

Histological and transcriptomic effects of 17?-methyltestosterone on zebrafish gonad development.
Lee SLJ, Horsfield JA, Black MA, Rutherford K, Fisher A, Gemmell NJ
BMC genomics18(1)557(2017 Jul)

Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Targeting oncogene expression to endothelial cells induces proliferation of the myelo-erythroid lineage by repressing the Notch pathway.
Alghisi E, Distel M, Malagola M, Anelli V, Santoriello C, Herwig L, Krudewig A, Henkel CV, Russo D, Mione MC
Leukemia27(11)2229-41(2013 Nov)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following macroh2a2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the macroh2a2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa34361	NM_001025502.1 Latest version!	Danio rerio macroH2A.2 histone (macroh2a2), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
ODa18425	XM_009307097.1 Latest version!	Danio rerio H2A histone family, member Y2 (h2afy2), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

macroh2a2 ( NM_001025502.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001020673.1 Danio rerio macroH2A.2 histone (macroh2a2), mRNA.

Price & Availability↑

CloneID	ODa34361
Clone ID Related Accession (Same CDS sequence)	NM_001025502.1
Accession Version	NM_001025502.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1104bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-10-25
Organism	Danio rerio(zebrafish)
Product	H2A histone family, member Y-like
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC097115.1. On Jul 16, 2005 this sequence version replaced XM_681958.1. ##Evidence-Data-START## Transcript exon combination :: BC097115.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGTCAGCCA GAGGAGGAAA GAAAAAGATC ACCAAGCTGT CCCGTTCCGC CCGGGCGGGA 
GTCATTTTTC CTGTGGGGAG AATGATGCGT TACTTGCGCA CAGGAACCCA TAAGTATCGT 
ATTGGCATGG GCGCCCCCGT CTACATGGCA GCTGTCATTG AGTACTTAGC AGCTGAGATT 
TTGGAGTTGG CTGGAAATGC AGCAAGAGAC AACAAAAAAG GGAGAATCAC TCCACGACAC 
ATCAAGCTGG CAGTGGCCAA TGATGAAGAA CTCAACCAGC TTCTCAGAGG AGTGACCATA 
TCGAATGGTG GAGTTCTGCC TCGCATTCAC CCTGAGCTGC TCTCCAAGAA GAGAGGAGGC 
AAGGTGAAGG TGGAGTCTCA GGTCGCCGTT CCGGAGAAGA GCGCCAAACG GAAACCCGTC 
AAGAAACCCT ACAAAAAGAG CAAAGGAAAA CCAGGCCGCA AACCCAAAAA AAGCACAGAG 
AACGACAAAG AAGCAGATGC CAACGCGATG GAAGACGGAC CAGGAGAGGG ATTTACTATC 
CTCTCAGCGA AGAGCTTGTT CCTTGGACAG AAGCTGTCCC TCACAGAGAG TGAAATCAGC 
AAAATCGGGA CGATCAAAGT GGAGGGAATC ATCAATCCCA CAAACGCAGA GATTGATCTG 
AAAGAGGGAA TCGGAAACGC TCTGGAGAAA ACAGGAGGAA AAGATTTCCT AGAGACTGTC 
AAGGAGCTGA GGAAAAGCCA GGGCCCTTTG GAGGTCGCAT CAGTGGCTGT GAGTCAGGCC 
AATGGGATGG CAGCGCGTTT CATCATCCAT TGTCACGTCC CGCAGTGGGG CTCCGATAAG 
TGCGAGGATC AGCTCGAGAA AACAGTCAAG AACTGCCTGT CTGCGGCCGA GGAGAAGAAG 
CTCAAATCAG TGGCTTTCCC TTCACTACCC GCGGGACGAA ACGGTTTTCC AAAGCAGACG 
GCAGCCCAGC TCATACTGAA GGCCATTTCA AACCATTTTG TGTCAGCAAC CACCTCGTCC 
CTGAAGAACA TTTACTTTGT TCTGTTTGAC AGCGAGAGCA TTGGGATTTA CCTGCAGGAG 
ATGGCCAAGA TGGACGCCAA GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001020673.1
CDS	367..1470
Translation	MSARGGKKKITKLSRSARAGVIFPVGRMMRYLRTGTHKYRIGMGAPVYMAAVIEYLAAEILELAGNAARDNKKGRITPRHIKLAVANDEELNQLLRGVTISNGGVLPRIHPELLSKKRGGKVKVESQVAVPEKSAKRKPVKKPYKKSKGKPGRKPKKSTENDKEADANAMEDGPGEGFTILSAKSLFLGQKLSLTESEISKIGTIKVEGIINPTNAEIDLKEGIGNALEKTGGKDFLETVKELRKSQGPLEVASVAVSQANGMAARFIIHCHVPQWGSDKCEDQLEKTVKNCLSAAEEKKLKSVAFPSLPAGRNGFPKQTAAQLILKAISNHFVSATTSSLKNIYFVLFDSESIGIYLQEMAKMDAK

Target ORF information:

RefSeq Version	NM_001025502.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio macroH2A.2 histone (macroh2a2), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001025502.1

ORF Insert Sequence:

ATGTCAGCCA GAGGAGGAAA GAAAAAGATC ACCAAGCTGT CCCGTTCCGC CCGGGCGGGA 
GTCATTTTTC CTGTGGGGAG AATGATGCGT TACTTGCGCA CAGGAACCCA TAAGTATCGT 
ATTGGCATGG GCGCCCCCGT CTACATGGCA GCTGTCATTG AGTACTTAGC AGCTGAGATT 
TTGGAGTTGG CTGGAAATGC AGCAAGAGAC AACAAAAAAG GGAGAATCAC TCCACGACAC 
ATCAAGCTGG CAGTGGCCAA TGATGAAGAA CTCAACCAGC TTCTCAGAGG AGTGACCATA 
TCGAATGGTG GAGTTCTGCC TCGCATTCAC CCTGAGCTGC TCTCCAAGAA GAGAGGAGGC 
AAGGTGAAGG TGGAGTCTCA GGTCGCCGTT CCGGAGAAGA GCGCCAAACG GAAACCCGTC 
AAGAAACCCT ACAAAAAGAG CAAAGGAAAA CCAGGCCGCA AACCCAAAAA AAGCACAGAG 
AACGACAAAG AAGCAGATGC CAACGCGATG GAAGACGGAC CAGGAGAGGG ATTTACTATC 
CTCTCAGCGA AGAGCTTGTT CCTTGGACAG AAGCTGTCCC TCACAGAGAG TGAAATCAGC 
AAAATCGGGA CGATCAAAGT GGAGGGAATC ATCAATCCCA CAAACGCAGA GATTGATCTG 
AAAGAGGGAA TCGGAAACGC TCTGGAGAAA ACAGGAGGAA AAGATTTCCT AGAGACTGTC 
AAGGAGCTGA GGAAAAGCCA GGGCCCTTTG GAGGTCGCAT CAGTGGCTGT GAGTCAGGCC 
AATGGGATGG CAGCGCGTTT CATCATCCAT TGTCACGTCC CGCAGTGGGG CTCCGATAAG 
TGCGAGGATC AGCTCGAGAA AACAGTCAAG AACTGCCTGT CTGCGGCCGA GGAGAAGAAG 
CTCAAATCAG TGGCTTTCCC TTCACTACCC GCGGGACGAA ACGGTTTTCC AAAGCAGACG 
GCAGCCCAGC TCATACTGAA GGCCATTTCA AACCATTTTG TGTCAGCAAC CACCTCGTCC 
CTGAAGAACA TTTACTTTGT TCTGTTTGAC AGCGAGAGCA TTGGGATTTA CCTGCAGGAG 
ATGGCCAAGA TGGACGCCAA GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

macroh2a2 ( XM_009307097.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_009305372.1 Danio rerio H2A histone family, member Y2 (h2afy2), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa18425
Clone ID Related Accession (Same CDS sequence)	XM_009307097.1
Accession Version	XM_009307097.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1104bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	H2A histone family, member Y-like isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTCAGCCA GAGGAGGAAA GAAAAAGATC ACCAAGCTGT CCCGTTCCGC CCGGGCGGGA 
GTCATTTTTC CTGTGGGGAG AATGATGCGT TACTTGCGCA CAGGAACCCA TAAGTATCGT 
ATTGGCATGG GCGCCCCCGT CTACATGGCA GCTGTCATTG AGTACTTAGC AGCTGAGATT 
TTGGAGTTGG CTGGAAATGC AGCAAGAGAC AACAAAAAAG GGAGAATTAC TCCACGACAC 
ATCAAGCTGG CAGTGGCCAA TGATGAAGAA CTCAACCAGC TTCTCAGAGG AGTGACCATA 
TCGAATGGTG GAGTTCTGCC TCGCATTCAC CCTGAGCTGC TCTCCAAGAA GAGAGGAGGC 
AAGGTGAAGG TGGAGTCTCA GGTCGCCGTT CCGGAGAAGA GCGCCAAACG GAAACCCGTC 
AAGAAACCCT ACAAAAAGAG CAAAGGAAAA CCAGGCCGCA AACCCAAAAA AAGCACAGAG 
AACGACAAAG AAGCAGATGC CAACGCGATG GAAGACGGAC CAGGAGAGGG ATTTACTATC 
CTCTCAGCGA AAAGCTTGTT CCTTGGACAG AAGCTGTCCC TCACAGAGAG TGAAATCAGC 
AAAATCGGGA CGATCAAAGT GGAGGGAATC ATCAATCCCA CAAACGCAGA GATTGATCTG 
AAAGAGGGAA TCGGAAACGC TCTGGAGAAA ACAGGAGGAA AAGATTTCCT AGAGACTGTC 
AAGGAGCTGA GGAAAAGCCA GGGCCCTTTG GAGGTCGCAT CAGTGGCTGT GAGTCAGGCC 
AATGGGATGG CAGCGCGTTT CATCATCCAT TGTCACGTCC CACAGTGGGG CTCCGATAAG 
TGCGAGGATC AGCTCGAGAA AACAGTCAAG AACTGCCTGT CTGCGGCCGA GGAGAAGAAG 
CTCAAATCAG TGGCTTTCCC TTCACTACCC GCTGGACGAA ACGGTTTTCC AAAGCAGACG 
GCAGCCCAGC TCATACTGAA GGCCATTTCA AACCATTTTG TGTCAGCAAC CACCTCGTCC 
CTGAAGAACA TTTACTTTGT TCTGTTTGAC AGCGAGAGCA TTGGGATTTA CCTGCAGGAG 
ATGGCCAAGA TGGACGCCAA GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009305372.1
CDS	247..1350
Translation	MSARGGKKKITKLSRSARAGVIFPVGRMMRYLRTGTHKYRIGMGAPVYMAAVIEYLAAEILELAGNAARDNKKGRITPRHIKLAVANDEELNQLLRGVTISNGGVLPRIHPELLSKKRGGKVKVESQVAVPEKSAKRKPVKKPYKKSKGKPGRKPKKSTENDKEADANAMEDGPGEGFTILSAKSLFLGQKLSLTESEISKIGTIKVEGIINPTNAEIDLKEGIGNALEKTGGKDFLETVKELRKSQGPLEVASVAVSQANGMAARFIIHCHVPQWGSDKCEDQLEKTVKNCLSAAEEKKLKSVAFPSLPAGRNGFPKQTAAQLILKAISNHFVSATTSSLKNIYFVLFDSESIGIYLQEMAKMDAK

Target ORF information:

RefSeq Version	XM_009307097.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio H2A histone family, member Y2 (h2afy2), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009307097.1

ORF Insert Sequence:

ATGTCAGCCA GAGGAGGAAA GAAAAAGATC ACCAAGCTGT CCCGTTCCGC CCGGGCGGGA 
GTCATTTTTC CTGTGGGGAG AATGATGCGT TACTTGCGCA CAGGAACCCA TAAGTATCGT 
ATTGGCATGG GCGCCCCCGT CTACATGGCA GCTGTCATTG AGTACTTAGC AGCTGAGATT 
TTGGAGTTGG CTGGAAATGC AGCAAGAGAC AACAAAAAAG GGAGAATTAC TCCACGACAC 
ATCAAGCTGG CAGTGGCCAA TGATGAAGAA CTCAACCAGC TTCTCAGAGG AGTGACCATA 
TCGAATGGTG GAGTTCTGCC TCGCATTCAC CCTGAGCTGC TCTCCAAGAA GAGAGGAGGC 
AAGGTGAAGG TGGAGTCTCA GGTCGCCGTT CCGGAGAAGA GCGCCAAACG GAAACCCGTC 
AAGAAACCCT ACAAAAAGAG CAAAGGAAAA CCAGGCCGCA AACCCAAAAA AAGCACAGAG 
AACGACAAAG AAGCAGATGC CAACGCGATG GAAGACGGAC CAGGAGAGGG ATTTACTATC 
CTCTCAGCGA AAAGCTTGTT CCTTGGACAG AAGCTGTCCC TCACAGAGAG TGAAATCAGC 
AAAATCGGGA CGATCAAAGT GGAGGGAATC ATCAATCCCA CAAACGCAGA GATTGATCTG 
AAAGAGGGAA TCGGAAACGC TCTGGAGAAA ACAGGAGGAA AAGATTTCCT AGAGACTGTC 
AAGGAGCTGA GGAAAAGCCA GGGCCCTTTG GAGGTCGCAT CAGTGGCTGT GAGTCAGGCC 
AATGGGATGG CAGCGCGTTT CATCATCCAT TGTCACGTCC CACAGTGGGG CTCCGATAAG 
TGCGAGGATC AGCTCGAGAA AACAGTCAAG AACTGCCTGT CTGCGGCCGA GGAGAAGAAG 
CTCAAATCAG TGGCTTTCCC TTCACTACCC GCTGGACGAA ACGGTTTTCC AAAGCAGACG 
GCAGCCCAGC TCATACTGAA GGCCATTTCA AACCATTTTG TGTCAGCAAC CACCTCGTCC 
CTGAAGAACA TTTACTTTGT TCTGTTTGAC AGCGAGAGCA TTGGGATTTA CCTGCAGGAG 
ATGGCCAAGA TGGACGCCAA GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Histological and transcriptomic effects of 17?-methyltestosterone on zebrafish gonad development.
BMC genomics18(1)557(2017 Jul)
Lee SLJ,Horsfield JA,Black MA,Rutherford K,Fisher A,Gemmell NJ

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 Mar)
Bay?s ?,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Targeting oncogene expression to endothelial cells induces proliferation of the myelo-erythroid lineage by repressing the Notch pathway.
Leukemia27(11)2229-41(2013 Nov)
Alghisi E,Distel M,Malagola M,Anelli V,Santoriello C,Herwig L,Krudewig A,Henkel CV,Russo D,Mione MC