rnf19a cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	rnf19a
Entrez Gene ID	557995
Full Name	ring finger protein 19A, RBR E3 ubiquitin protein ligase
Synonyms	fj68f04,wu:fj68f04
General protein information	Preferred Names ring finger protein 19A, RBR E3 ubiquitin protein ligase Names E3 ubiquitin-protein ligase RNF19A ring finger protein 19A, E3 ubiquitin protein ligase
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001326695.1	NP_001313624.1	E3 ubiquitin-protein ligase RNF19A

Pathways from BioSystems

Homologies

Gallus gallus (chicken)	RNF19A	XP_418362.3
	RNF19A	XP_002805474.1
Xenopus tropicalis (tropical clawed frog)	rnf19a	NP_001116899.1
Homo sapiens (human)	RNF19A	NP_001267468.1
Pan troglodytes (chimpanzee)	RNF19A	XP_001152507.1
Bos taurus (cattle)	RNF19A	NP_001178260.1
Danio rerio (zebrafish)	LOC557995	XP_686250.4
Canis lupus familiaris (dog)	RNF19A	XP_848454.1
Rattus norvegicus (Norway rat)	Rnf19a	NP_001124032.1
Mus musculus (house mouse)	Rnf19a	NP_038951.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following rnf19a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the rnf19a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa24001	NM_001326695.1 Latest version!	Danio rerio ring finger protein 19A, RBR E3 ubiquitin protein ligase (rnf19a), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$510.30 $729.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

rnf19a ( NM_001326695.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001313624.1 Danio rerio ring finger protein 19A, RBR E3 ubiquitin protein ligase (rnf19a), mRNA.

Price & Availability↑

CloneID	ODa24001
Clone ID Related Accession (Same CDS sequence)	NM_001326695.1
Accession Version	NM_001326695.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2742bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	E3 ubiquitin-protein ligase RNF19A
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from FP236813.4. On May 24, 2016 this sequence version replaced XM_681158.7. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: GFIL01023086.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGAAATGCT TTTACGCGGA TGACTTGAAA GATCAGGTCG AGATCCAGCC TGGTGACTCC 
AAACTGACAC GTGTGTCCCA ACTTGAGCTG CCCGGCTCAA GGGAGCAGCT TGCAGAGAGT 
TCACCGCCAT GTCTTAACAC CTCACGGTCC CCTCTGAAAA CCCTGTCCCC CCTTCCCTCT 
CTCTCCCCTC CCTCCCCCTC CTCCTCTTCC TCCCCTTCCC TCCCTGTAGA CACTTCCCAG 
TCCTTTGGAA ACCACAGTGC CTCCTTCGGA GAGATGAGTT TGCATCAGCA GCAGCAGGGG 
TCGGAGAGGG ACCTCCCCTC CGCTGCCTCG TCCGTCAGTC TACCCTCTGT AAGGAAGACT 
CCTAAGAAGC GGCGTATCTC GCTGCGCTCA CTGTTTCGTC GTCGTTGTGG GGATCCCAAA 
TCCCGCAAGT CAAGGGCACT AGCCGCCGGA GTAGATGGCA TTGCCAGCGT GGAGAGCGTG 
CACTCTGAAA TGTGCCAGCA GCAGGATCAC GCTTCGGCTC TTTCTGCGGC CGGTGTGGCC 
TACACCTCGT CTTCATGCTC CTCGTCCTCA GGCTCCACCT CTGAGCTGCT GGAGTGTCCG 
CTGTGCCTGC TGCGCCACAC CAGAGACCGT TTTCCTGACA TCATGACATG CCACCACCGC 
TCGTGTGCCG ACTGCCTCCG ACAGTATCTC CGCATCGAGA TATCCGAGAG TAGGGTCAAC 
ATCAGCTGCC CAGAGTGCTC GGAGCGCTTC AACCCCCATG ACATCCGGAT GATACTCAAC 
GATCGGGTGC TTATGGAGAA GTATGAAGAG TTCATGTTGC GCCGCTGGCT GGTGGCGGAC 
CCTGACTGTC GATGGTGCCC TGCTCCAGAC TGCGGGTATG CGGTCATTGC CTTCGGTTGT 
GCCAGCTGTC CAAAGATCAC GTGTGGTCGT GACGGCTGCG GGACTGAGTT CTGTTACCAC 
TGTAAACAGC TGTGGCATCC AAATCAGACC TGTGACGCCG CTCGACAGCA GAGAGCCCAA 
AGTCTGCGGC TGAGACCCTT CAGATCATCC TCACTCAGCT ACAGCCAGGA GAGCGGCGCT 
GCTGCTGACG ACATTAAGCC ATGTCCCCGC TGTGCGGCCT ACATCATTAA GATGAATGAT 
GGGAGCTGTA ATCACATGAC CTGCGCAGTG TGCGGCTGTG AGTTCTGCTG GCTGTGTATG 
AAGGAGATCT CTGACCTGCA CTACTTAAGT CCTTCGGGAT GCACATTCTG GGGTAAGAAG 
CCCTGGAGCA GGAAGAAGAA AATCCTGTGG CAGTTGGGCA CGCTAGTGGG AGCTCCCGTT 
GGCATTGCAC TGATTGCAGG CATTGCCATA CCCGCGATGA TCATTGGGAT ACCGGTGTAT 
GTGGGAAGAA AGATTCATAA TCGTTATGAA GGGAAAGACA TCTCCAAGCA CAAGAGGAAC 
CTTGTCATAG CCGGCGGAGT GACTTTATCT GTCATTGTGT CTCCAGTGGT TGCTGCTGTT 
ACTGTTGGAA TAGGAGTGCC CATCATGTTG GCATATGTCT ATGGTGTGGT GCCCATCTCT 
CTGTGCCGCA GCGGTGGTTG CGGTGTGTCT GCGGGCAACG GTAAAGGTGT TCGTATCGAG 
TTTGATGATG AGAACGACAT GAACCCTGGC ACTGGAGCTG CTGTGACTGA CACCACTTCA 
GTAGCAGAGA CCAGGCAAAA CCCCAGCATT GGTGAGGGCA GTGTAGGAGG TCTGACAGGC 
AGTCTGAGTG CCAGCGGGAG CCACATGGAG CGTATTGGAG CAATGAGAGA CAACCTGAGT 
GAGAACGCCA GCACTATGGC CCTTGCTGGA GCCAGCATCA CTGGCAGCCT GTCAGGAAGT 
GCCATGGTCA ACTGCTTCAA CAGATTGGAG GTTCAAGCTG ATGTTCAAAA GGAGCGTTGC 
AGTCTGAGTG GAGAGTCTGG TACCGTCAGT CTGGGGACAA TCAGTGACAA CGCTAGCACC 
AAAGCAATGG CTGGATCCAT TCTCAACGCC TACTTGCCTA TGGACAGAGA TGGGAACAGT 
GTGGAGGTGC AGGTGGATGT GGAATCTAAA AGAGGGAAGC TCCGGCACCA CAGTGGCAGC 
AGCAGCATGG ATGACGGCAG CAGTGGAGGC CCCGGGGCGA GTGCTTGCCC CTCTGGCTGT 
CTTCACGACG GCAAATGCGT CACTTCTCGC TGGGCCAAGG AGCCATCCTC CACTTCATCC 
TCATCATCTG GCAAGAAGAG TAAAGGAAAG CTGCGCAAAA AGAGCGGCGG AACCAAGATT 
AATGAGACAC GCGAAGACAT GGACGCACAG CTGCTGGAGC GCCGCAGCAC CAACTCCAGC 
GAACTAGACT CTCCTTCTCT GAGCGGCAGC CTTCCGTCTG TGGCCGACTC GCACTCCAGC 
CACTTCTCAG AGTTCAGCTG CTCTGACCTG GACGCCTGCA GACCTACATG CTACGAGTCT 
CACATCCGCC ATCCCAACAC AGGCGGAGCG GTCAGCCCTC TTCCCGAAGT CGAAAACGAC 
CGGCTGGAAA ACTGTCCTGC TTCTGGGAGC CTCCCTCAAG CTATGGTAGC CCCAATCTCC 
CCCGATGGGG CGGCAGAGCG TCCTCTGTGC TACATTGCAG AGGAGAATGT GAGTTTAATG 
TGTGCGGCTA ATGCGAGCCA GAGCTCGCCT AAAGAACGCA ATAACAACCT TCCTCAGCCA 
GCTAGCCCTG TGCGCAACAC CTGCATTCAA ACCGAGATAT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001313624.1
CDS	176..2917
Translation	MKCFYADDLKDQVEIQPGDSKLTRVSQLELPGSREQLAESSPPCLNTSRSPLKTLSPLPSLSPPSPSSSSSPSLPVDTSQSFGNHSASFGEMSLHQQQQGSERDLPSAASSVSLPSVRKTPKKRRISLRSLFRRRCGDPKSRKSRALAAGVDGIASVESVHSEMCQQQDHASALSAAGVAYTSSSCSSSSGSTSELLECPLCLLRHTRDRFPDIMTCHHRSCADCLRQYLRIEISESRVNISCPECSERFNPHDIRMILNDRVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKITCGRDGCGTEFCYHCKQLWHPNQTCDAARQQRAQSLRLRPFRSSSLSYSQESGAAADDIKPCPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKKKILWQLGTLVGAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYEGKDISKHKRNLVIAGGVTLSVIVSPVVAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVSAGNGKGVRIEFDDENDMNPGTGAAVTDTTSVAETRQNPSIGEGSVGGLTGSLSASGSHMERIGAMRDNLSENASTMALAGASITGSLSGSAMVNCFNRLEVQADVQKERCSLSGESGTVSLGTISDNASTKAMAGSILNAYLPMDRDGNSVEVQVDVESKRGKLRHHSGSSSMDDGSSGGPGASACPSGCLHDGKCVTSRWAKEPSSTSSSSSGKKSKGKLRKKSGGTKINETREDMDAQLLERRSTNSSELDSPSLSGSLPSVADSHSSHFSEFSCSDLDACRPTCYESHIRHPNTGGAVSPLPEVENDRLENCPASGSLPQAMVAPISPDGAAERPLCYIAEENVSLMCAANASQSSPKERNNNLPQPASPVRNTCIQTEI

Target ORF information:

RefSeq Version	NM_001326695.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio ring finger protein 19A, RBR E3 ubiquitin protein ligase (rnf19a), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001326695.1

ORF Insert Sequence:

ATGAAATGCT TTTACGCGGA TGACTTGAAA GATCAGGTCG AGATCCAGCC TGGTGACTCC 
AAACTGACAC GTGTGTCCCA ACTTGAGCTG CCCGGCTCAA GGGAGCAGCT TGCAGAGAGT 
TCACCGCCAT GTCTTAACAC CTCACGGTCC CCTCTGAAAA CCCTGTCCCC CCTTCCCTCT 
CTCTCCCCTC CCTCCCCCTC CTCCTCTTCC TCCCCTTCCC TCCCTGTAGA CACTTCCCAG 
TCCTTTGGAA ACCACAGTGC CTCCTTCGGA GAGATGAGTT TGCATCAGCA GCAGCAGGGG 
TCGGAGAGGG ACCTCCCCTC CGCTGCCTCG TCCGTCAGTC TACCCTCTGT AAGGAAGACT 
CCTAAGAAGC GGCGTATCTC GCTGCGCTCA CTGTTTCGTC GTCGTTGTGG GGATCCCAAA 
TCCCGCAAGT CAAGGGCACT AGCCGCCGGA GTAGATGGCA TTGCCAGCGT GGAGAGCGTG 
CACTCTGAAA TGTGCCAGCA GCAGGATCAC GCTTCGGCTC TTTCTGCGGC CGGTGTGGCC 
TACACCTCGT CTTCATGCTC CTCGTCCTCA GGCTCCACCT CTGAGCTGCT GGAGTGTCCG 
CTGTGCCTGC TGCGCCACAC CAGAGACCGT TTTCCTGACA TCATGACATG CCACCACCGC 
TCGTGTGCCG ACTGCCTCCG ACAGTATCTC CGCATCGAGA TATCCGAGAG TAGGGTCAAC 
ATCAGCTGCC CAGAGTGCTC GGAGCGCTTC AACCCCCATG ACATCCGGAT GATACTCAAC 
GATCGGGTGC TTATGGAGAA GTATGAAGAG TTCATGTTGC GCCGCTGGCT GGTGGCGGAC 
CCTGACTGTC GATGGTGCCC TGCTCCAGAC TGCGGGTATG CGGTCATTGC CTTCGGTTGT 
GCCAGCTGTC CAAAGATCAC GTGTGGTCGT GACGGCTGCG GGACTGAGTT CTGTTACCAC 
TGTAAACAGC TGTGGCATCC AAATCAGACC TGTGACGCCG CTCGACAGCA GAGAGCCCAA 
AGTCTGCGGC TGAGACCCTT CAGATCATCC TCACTCAGCT ACAGCCAGGA GAGCGGCGCT 
GCTGCTGACG ACATTAAGCC ATGTCCCCGC TGTGCGGCCT ACATCATTAA GATGAATGAT 
GGGAGCTGTA ATCACATGAC CTGCGCAGTG TGCGGCTGTG AGTTCTGCTG GCTGTGTATG 
AAGGAGATCT CTGACCTGCA CTACTTAAGT CCTTCGGGAT GCACATTCTG GGGTAAGAAG 
CCCTGGAGCA GGAAGAAGAA AATCCTGTGG CAGTTGGGCA CGCTAGTGGG AGCTCCCGTT 
GGCATTGCAC TGATTGCAGG CATTGCCATA CCCGCGATGA TCATTGGGAT ACCGGTGTAT 
GTGGGAAGAA AGATTCATAA TCGTTATGAA GGGAAAGACA TCTCCAAGCA CAAGAGGAAC 
CTTGTCATAG CCGGCGGAGT GACTTTATCT GTCATTGTGT CTCCAGTGGT TGCTGCTGTT 
ACTGTTGGAA TAGGAGTGCC CATCATGTTG GCATATGTCT ATGGTGTGGT GCCCATCTCT 
CTGTGCCGCA GCGGTGGTTG CGGTGTGTCT GCGGGCAACG GTAAAGGTGT TCGTATCGAG 
TTTGATGATG AGAACGACAT GAACCCTGGC ACTGGAGCTG CTGTGACTGA CACCACTTCA 
GTAGCAGAGA CCAGGCAAAA CCCCAGCATT GGTGAGGGCA GTGTAGGAGG TCTGACAGGC 
AGTCTGAGTG CCAGCGGGAG CCACATGGAG CGTATTGGAG CAATGAGAGA CAACCTGAGT 
GAGAACGCCA GCACTATGGC CCTTGCTGGA GCCAGCATCA CTGGCAGCCT GTCAGGAAGT 
GCCATGGTCA ACTGCTTCAA CAGATTGGAG GTTCAAGCTG ATGTTCAAAA GGAGCGTTGC 
AGTCTGAGTG GAGAGTCTGG TACCGTCAGT CTGGGGACAA TCAGTGACAA CGCTAGCACC 
AAAGCAATGG CTGGATCCAT TCTCAACGCC TACTTGCCTA TGGACAGAGA TGGGAACAGT 
GTGGAGGTGC AGGTGGATGT GGAATCTAAA AGAGGGAAGC TCCGGCACCA CAGTGGCAGC 
AGCAGCATGG ATGACGGCAG CAGTGGAGGC CCCGGGGCGA GTGCTTGCCC CTCTGGCTGT 
CTTCACGACG GCAAATGCGT CACTTCTCGC TGGGCCAAGG AGCCATCCTC CACTTCATCC 
TCATCATCTG GCAAGAAGAG TAAAGGAAAG CTGCGCAAAA AGAGCGGCGG AACCAAGATT 
AATGAGACAC GCGAAGACAT GGACGCACAG CTGCTGGAGC GCCGCAGCAC CAACTCCAGC 
GAACTAGACT CTCCTTCTCT GAGCGGCAGC CTTCCGTCTG TGGCCGACTC GCACTCCAGC 
CACTTCTCAG AGTTCAGCTG CTCTGACCTG GACGCCTGCA GACCTACATG CTACGAGTCT 
CACATCCGCC ATCCCAACAC AGGCGGAGCG GTCAGCCCTC TTCCCGAAGT CGAAAACGAC 
CGGCTGGAAA ACTGTCCTGC TTCTGGGAGC CTCCCTCAAG CTATGGTAGC CCCAATCTCC 
CCCGATGGGG CGGCAGAGCG TCCTCTGTGC TACATTGCAG AGGAGAATGT GAGTTTAATG 
TGTGCGGCTA ATGCGAGCCA GAGCTCGCCT AAAGAACGCA ATAACAACCT TCCTCAGCCA 
GCTAGCCCTG TGCGCAACAC CTGCATTCAA ACCGAGATAT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

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rnf19a cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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