txnipb cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	txnipb
Entrez Gene ID	448858
Full Name	thioredoxin interacting protein b
Synonyms	txnipl
General protein information	Preferred Names thioredoxin interacting protein b Names thioredoxin-interacting protein thioredoxin interacting protein, like
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_017351341.1	XP_017206830.1	thioredoxin-interacting protein isoform X1
NM_001252504.1	NP_001239433.1	thioredoxin-interacting protein

Pathways from BioSystems

Homologies

	TXNIP	XP_001092636.1
Xenopus tropicalis (tropical clawed frog)	txnip	XP_002938510.2
Canis lupus familiaris (dog)	TXNIP	XP_533037.2
Bos taurus (cattle)	TXNIP	NP_001095345.2
Rattus norvegicus (Norway rat)	Txnip	NP_001008767.1
Homo sapiens (human)	TXNIP	NP_006463.3
Pan troglodytes (chimpanzee)	TXNIP	XP_001156564.1
Danio rerio (zebrafish)	txnipa	NP_956381.1
Danio rerio (zebrafish)	txnipb	NP_001239433.1
Mus musculus (house mouse)	Txnip	NP_076208.2

Gene Ontology
Bibliography

Related articles in PubMed

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Partial depletion of yolk during zebrafish embryogenesis changes the dynamics of methionine cycle and metabolic genes.
Huang Y, Linsen SE
BMC genomics16427(2015 Jun)

Zebrafish Bone and General Physiology Are Differently Affected by Hormones or Changes in Gravity.
Aceto J, Nourizadeh-Lillabadi R, Mar?e R, Dardenne N, Jeanray N, Wehenkel L, Alestr?m P, van Loon JJ, Muller M
PloS one10(6)e0126928(2015)

Contrasted innate responses to two viruses in zebrafish: insights into the ancestral repertoire of vertebrate IFN-stimulated genes.
Briolat V, Jouneau L, Carvalho R, Palha N, Langevin C, Herbomel P, Schwartz O, Spaink HP, Levraud JP, Boudinot P
Journal of immunology (Baltimore, Md. : 1950)192(9)4328-41(2014 May)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following txnipb gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the txnipb cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa33089	NM_001252504.1 Latest version!	Danio rerio thioredoxin interacting protein b (txnipb), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
ODa55372	XM_017351341.1 Latest version!	Danio rerio thioredoxin interacting protein b (txnipb), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

txnipb ( NM_001252504.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001239433.1 Danio rerio thioredoxin interacting protein b (txnipb), mRNA.

Price & Availability↑

CloneID	ODa33089
Clone ID Related Accession (Same CDS sequence)	NM_001252504.1
Accession Version	NM_001252504.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1137bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	thioredoxin-interacting protein
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CR854827.20. On Nov 18, 2011 this sequence version replaced XM_003200245.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: GFIL01042409.1, GDQH01025648.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA3505370, SAMEA3505371 [ECO:0000350] ##Evidence-Data-END##

ATGGGCGTAC TGACGAAGAA ACCCAAGGCC TTCGAGGTTC AAATGAGTGA CCCAAACAAG 
ATCGCGTACA GCGGCGGAGA TAAAGTGGCC GGGCGGGTGA TCGTGGAGGT GGCGGAGCTG 
CTGAAGGTCT CCGCCGTCAA ACTGTTCGGA GTCGGATGCG CTAAAGTCAA TTATAAAAAG 
GGAAAACTGC ACTGCAGCGA GGAGATTGAG TACCTGAAAT ATGAAGAAAT TCTTCATCTT 
GATCATCATT CAACAACAGA TGATGAAGGC TCCATCACTC TCAGGCCTGG AAACAGATAC 
GAATTCATGT TTGGGTTCGA GCTTCCTCAG TCAGGGTGCT TAGTTTCATC TTATGAGGGG 
AAGTTTGGCT CAGTCCAGTA CTACGTGAGG GCAGTCATGG AGAAATCATC CCAGACGTTT 
GCAGAATGCA AGCGATATTT CGAGGTGGTG GAACCCATTG ATGTGAACAC TCAAGAGCTC 
ATGGCTCCGG TTAAAGGATC GAAACAGAAG AAAGTCACCT GCATGTTTAT TCCCGATGGC 
AGCGTTTCAA TAGTTGCTAG CATAGGCCGC AAGGGTTACT GCGAAGGAGA AGACATTTGC 
ATCGATGCTC AGTTCGAGAA CACCAGCTCT CGGATTGTCA TTCCCAAAGC CGCCATCATA 
GCCAAGCACA TTTACCTGGC CAATGGTCGC ACCAAAGTGT TCGAAGAGAA ACTCACTTCT 
GTTAGGGGAA ACCACATCAT CTCTGGCATG GGTGATATTT GGCAGGGCAG AGTCCTCCGT 
GTGCCCAAGC TGAAGCCCAC CATCTTAGGC TGTGACATTA TTCACGTCGA CTACTCTCTA 
AGGATCTACT TGCACATCCC AGGAAGTGAA AAGCTGATCC TAGAACTGCC CCTGGTCATT 
GGGACGATCC CCTACAATGG CATGAACAGT CGCACCAGCA GCATGAGCAG CCAGGAGAGC 
GCCTCTAGTA CCTGCGTGTC ACTCCCGTCT TCTCCACCCA GCTACAGCAA CATCTCCAAC 
CGCATGGATA GTTCGTTTAT TCCTCTGCTG GATGATTACG ATGAGGATGA CAGTCCAATC 
TTCATGCAGA TTCATCATCC TCTCCCCCCT CCTCCACTGT ACACTGAGCA TATCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001239433.1
CDS	179..1315
Translation	MGVLTKKPKAFEVQMSDPNKIAYSGGDKVAGRVIVEVAELLKVSAVKLFGVGCAKVNYKKGKLHCSEEIEYLKYEEILHLDHHSTTDDEGSITLRPGNRYEFMFGFELPQSGCLVSSYEGKFGSVQYYVRAVMEKSSQTFAECKRYFEVVEPIDVNTQELMAPVKGSKQKKVTCMFIPDGSVSIVASIGRKGYCEGEDICIDAQFENTSSRIVIPKAAIIAKHIYLANGRTKVFEEKLTSVRGNHIISGMGDIWQGRVLRVPKLKPTILGCDIIHVDYSLRIYLHIPGSEKLILELPLVIGTIPYNGMNSRTSSMSSQESASSTCVSLPSSPPSYSNISNRMDSSFIPLLDDYDEDDSPIFMQIHHPLPPPPLYTEHI

Target ORF information:

RefSeq Version	NM_001252504.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio thioredoxin interacting protein b (txnipb), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001252504.1

ORF Insert Sequence:

ATGGGCGTAC TGACGAAGAA ACCCAAGGCC TTCGAGGTTC AAATGAGTGA CCCAAACAAG 
ATCGCGTACA GCGGCGGAGA TAAAGTGGCC GGGCGGGTGA TCGTGGAGGT GGCGGAGCTG 
CTGAAGGTCT CCGCCGTCAA ACTGTTCGGA GTCGGATGCG CTAAAGTCAA TTATAAAAAG 
GGAAAACTGC ACTGCAGCGA GGAGATTGAG TACCTGAAAT ATGAAGAAAT TCTTCATCTT 
GATCATCATT CAACAACAGA TGATGAAGGC TCCATCACTC TCAGGCCTGG AAACAGATAC 
GAATTCATGT TTGGGTTCGA GCTTCCTCAG TCAGGGTGCT TAGTTTCATC TTATGAGGGG 
AAGTTTGGCT CAGTCCAGTA CTACGTGAGG GCAGTCATGG AGAAATCATC CCAGACGTTT 
GCAGAATGCA AGCGATATTT CGAGGTGGTG GAACCCATTG ATGTGAACAC TCAAGAGCTC 
ATGGCTCCGG TTAAAGGATC GAAACAGAAG AAAGTCACCT GCATGTTTAT TCCCGATGGC 
AGCGTTTCAA TAGTTGCTAG CATAGGCCGC AAGGGTTACT GCGAAGGAGA AGACATTTGC 
ATCGATGCTC AGTTCGAGAA CACCAGCTCT CGGATTGTCA TTCCCAAAGC CGCCATCATA 
GCCAAGCACA TTTACCTGGC CAATGGTCGC ACCAAAGTGT TCGAAGAGAA ACTCACTTCT 
GTTAGGGGAA ACCACATCAT CTCTGGCATG GGTGATATTT GGCAGGGCAG AGTCCTCCGT 
GTGCCCAAGC TGAAGCCCAC CATCTTAGGC TGTGACATTA TTCACGTCGA CTACTCTCTA 
AGGATCTACT TGCACATCCC AGGAAGTGAA AAGCTGATCC TAGAACTGCC CCTGGTCATT 
GGGACGATCC CCTACAATGG CATGAACAGT CGCACCAGCA GCATGAGCAG CCAGGAGAGC 
GCCTCTAGTA CCTGCGTGTC ACTCCCGTCT TCTCCACCCA GCTACAGCAA CATCTCCAAC 
CGCATGGATA GTTCGTTTAT TCCTCTGCTG GATGATTACG ATGAGGATGA CAGTCCAATC 
TTCATGCAGA TTCATCATCC TCTCCCCCCT CCTCCACTGT ACACTGAGCA TATCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

txnipb ( XM_017351341.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_017206830.1 Danio rerio thioredoxin interacting protein b (txnipb), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa55372
Clone ID Related Accession (Same CDS sequence)	XM_017351341.1
Accession Version	XM_017351341.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1140bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	thioredoxin-interacting protein isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007127.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGGCGTAC TGACGAAGAA ACCCAAGGCC TTCGAGGTTC AAATGAGTGA CCCAAACAAG 
ATCGCGTACA GCGGCGGAGA TAAAGTGGCC GGGCGGGTGA TCGTGGAGGT GGCGGAGCTG 
CTGAAGGTCT CCGCCGTCAA ACTGTTCGGA GTCGGATGCG CTAAAGTCAA TTATAAAAAG 
GGAAAACTGC ACTGCAGCGA GGAGATTGAG TACCTGAAAT ATGAAGAAAT TCTTCATCTT 
GATCATCATT CAACAACAGA TGATGAAGGC TCCATCACTC TCAGGCCTGG AAACAGATAC 
GAATTCATGT TTGGGTTCGA GCTTCCTCAG TCAGGGTGCT TAGTTTCATC TTATGAGGGG 
AAGTTTGGCT CAGTCCAGTA CTACGTGAGG GCAGTCATGG AGAAATCATC CCAGACGTTT 
GCAGAATGCA AGCGATATTT CGAGGTGGTG GAACCCATTG ATGTGAACAC TCAAGAGCTC 
ATGGCTCCGG TTAAAGGATC GAAACAGAAG AAAGTCACCT GCATGTTTAT TCCCGATGGC 
AGCGTTTCAA TAGTTGCTAG CATAGGCCGC AAGGGTTACT GCGAAGGAGA AGACATTTGC 
ATCGATGCTC AGTTCGAGAA CACCAGCTCT CGGATTGTCA TTCCCAAAGC CGCCATCATA 
GCCAAGCACA TTTACCTGGC CAATGGTCGC ACCAAAGTGT TCGAAGAGAA ACTCACTTCT 
GTTAGGGGAA ACCACATCAT CTCTGGCATG GGTGATATTT GGCAGGGCAG AGTCCTCCGT 
GTGCCCAAGC TGAAGCCCAC CATCTTAGGC TGTGACATTA TTCACGTCGA CTACTCTCTA 
AGGATCTACT TGCACATCCC AGGAAGTGAA AAGCTGATCC TAGAACTGCC CCTGGTCATT 
GGGACGATCC CCTACAATGG CATGAACAGT CGCACCAGCA GCATGAGCAG CCAGGAGAGC 
GCCTCTAGTA CCTGCGTGTC ACTCCCGTCT TCTCCACCCA GCTACAGCAA CATCTCCAAC 
CGCATGGATA GTTCGTTTAT TCCTCTGCTG GATGATTACG ATGAGGATGA CAGTCCAATC 
TTCATGCAGA TTCATCATCC TCTCCCCCCT CCTCCACTGT ACACTGAGCA GCATATCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017206830.1
CDS	259..1398
Translation	MGVLTKKPKAFEVQMSDPNKIAYSGGDKVAGRVIVEVAELLKVSAVKLFGVGCAKVNYKKGKLHCSEEIEYLKYEEILHLDHHSTTDDEGSITLRPGNRYEFMFGFELPQSGCLVSSYEGKFGSVQYYVRAVMEKSSQTFAECKRYFEVVEPIDVNTQELMAPVKGSKQKKVTCMFIPDGSVSIVASIGRKGYCEGEDICIDAQFENTSSRIVIPKAAIIAKHIYLANGRTKVFEEKLTSVRGNHIISGMGDIWQGRVLRVPKLKPTILGCDIIHVDYSLRIYLHIPGSEKLILELPLVIGTIPYNGMNSRTSSMSSQESASSTCVSLPSSPPSYSNISNRMDSSFIPLLDDYDEDDSPIFMQIHHPLPPPPLYTEQHI

Target ORF information:

RefSeq Version	XM_017351341.1
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio thioredoxin interacting protein b (txnipb), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017351341.1

ORF Insert Sequence:

ATGGGCGTAC TGACGAAGAA ACCCAAGGCC TTCGAGGTTC AAATGAGTGA CCCAAACAAG 
ATCGCGTACA GCGGCGGAGA TAAAGTGGCC GGGCGGGTGA TCGTGGAGGT GGCGGAGCTG 
CTGAAGGTCT CCGCCGTCAA ACTGTTCGGA GTCGGATGCG CTAAAGTCAA TTATAAAAAG 
GGAAAACTGC ACTGCAGCGA GGAGATTGAG TACCTGAAAT ATGAAGAAAT TCTTCATCTT 
GATCATCATT CAACAACAGA TGATGAAGGC TCCATCACTC TCAGGCCTGG AAACAGATAC 
GAATTCATGT TTGGGTTCGA GCTTCCTCAG TCAGGGTGCT TAGTTTCATC TTATGAGGGG 
AAGTTTGGCT CAGTCCAGTA CTACGTGAGG GCAGTCATGG AGAAATCATC CCAGACGTTT 
GCAGAATGCA AGCGATATTT CGAGGTGGTG GAACCCATTG ATGTGAACAC TCAAGAGCTC 
ATGGCTCCGG TTAAAGGATC GAAACAGAAG AAAGTCACCT GCATGTTTAT TCCCGATGGC 
AGCGTTTCAA TAGTTGCTAG CATAGGCCGC AAGGGTTACT GCGAAGGAGA AGACATTTGC 
ATCGATGCTC AGTTCGAGAA CACCAGCTCT CGGATTGTCA TTCCCAAAGC CGCCATCATA 
GCCAAGCACA TTTACCTGGC CAATGGTCGC ACCAAAGTGT TCGAAGAGAA ACTCACTTCT 
GTTAGGGGAA ACCACATCAT CTCTGGCATG GGTGATATTT GGCAGGGCAG AGTCCTCCGT 
GTGCCCAAGC TGAAGCCCAC CATCTTAGGC TGTGACATTA TTCACGTCGA CTACTCTCTA 
AGGATCTACT TGCACATCCC AGGAAGTGAA AAGCTGATCC TAGAACTGCC CCTGGTCATT 
GGGACGATCC CCTACAATGG CATGAACAGT CGCACCAGCA GCATGAGCAG CCAGGAGAGC 
GCCTCTAGTA CCTGCGTGTC ACTCCCGTCT TCTCCACCCA GCTACAGCAA CATCTCCAAC 
CGCATGGATA GTTCGTTTAT TCCTCTGCTG GATGATTACG ATGAGGATGA CAGTCCAATC 
TTCATGCAGA TTCATCATCC TCTCCCCCCT CCTCCACTGT ACACTGAGCA GCATATCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Partial depletion of yolk during zebrafish embryogenesis changes the dynamics of methionine cycle and metabolic genes.
BMC genomics16427(2015 Jun)
Huang Y,Linsen SE

Zebrafish Bone and General Physiology Are Differently Affected by Hormones or Changes in Gravity.
PloS one10(6)e0126928(2015)
Aceto J,Nourizadeh-Lillabadi R,Mar?e R,Dardenne N,Jeanray N,Wehenkel L,Alestr?m P,van Loon JJ,Muller M

Contrasted innate responses to two viruses in zebrafish: insights into the ancestral repertoire of vertebrate IFN-stimulated genes.
Journal of immunology (Baltimore, Md. : 1950)192(9)4328-41(2014 May)
Briolat V,Jouneau L,Carvalho R,Palha N,Langevin C,Herbomel P,Schwartz O,Spaink HP,Levraud JP,Boudinot P

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txnipb cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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