psmf1 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	psmf1
Entrez Gene ID	436820
Full Name	proteasome inhibitor subunit 1
Synonyms	zgc:92785
General protein information	Preferred Names proteasome inhibitor subunit 1 Names proteasome inhibitor PI31 subunit proteasome (prosome, macropain) inhibitor subunit 1
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001002547.2	NP_001002547.2	proteasome inhibitor PI31 subunit

Pathways from BioSystems

Homologies

Homo sapiens (human)	PSMF1	NP_848693.2
Bos taurus (cattle)	PSMF1	NP_001069946.1
	PSMF1	XP_001112708.1
Canis lupus familiaris (dog)	PSMF1	XP_534374.2
Rattus norvegicus (Norway rat)	Psmf1	NP_001094475.1
Danio rerio (zebrafish)	psmf1	NP_001002547.2
Drosophila melanogaster (fruit fly)	PI31	NP_725093.1
Mus musculus (house mouse)	Psmf1	NP_997611.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP007418	XP_308420.3
Pan troglodytes (chimpanzee)	PSMF1	XP_001152935.1
Gallus gallus (chicken)	PSMF1	NP_001026753.1

Gene Ontology
Bibliography

Related articles in PubMed

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Chromosomal deletions and inversions mediated by TALENs and CRISPR/Cas in zebrafish.
Xiao A, Wang Z, Hu Y, Wu Y, Luo Z, Yang Z, Zu Y, Li W, Huang P, Tong X, Zhu Z, Lin S, Zhang B
Nucleic acids research41(14)e141(2013 Aug)

RNA-seq liver transcriptome analysis reveals an activated MHC-I pathway and an inhibited MHC-II pathway at the early stage of vaccine immunization in zebrafish.
Yang D, Liu Q, Yang M, Wu H, Wang Q, Xiao J, Zhang Y
BMC genomics13319(2012 Jul)

Hematopoietic gene expression profile in zebrafish kidney marrow.
Song HD, Sun XJ, Deng M, Zhang GW, Zhou Y, Wu XY, Sheng Y, Chen Y, Ruan Z, Jiang CL, Fan HY, Zon LI, Kanki JP, Liu TX, Look AT, Chen Z
Proceedings of the National Academy of Sciences of the United States of America101(46)16240-5(2004 Nov)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following psmf1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the psmf1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa00408	NM_001002547.2 Latest version!	Danio rerio proteasome inhibitor subunit 1 (psmf1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

psmf1 ( NM_001002547.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001002547.2 Danio rerio proteasome inhibitor subunit 1 (psmf1), mRNA.

Price & Availability↑

CloneID	ODa00408
Clone ID Related Accession (Same CDS sequence)	NM_001002547.2
Accession Version	NM_001002547.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 819bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	proteasome inhibitor PI31 subunit
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX001037.13, EH484771.1 and CD604800.1. On Jul 20, 2010 this sequence version replaced NM_001002547.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: EH473760.1, GFIL01031653.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGGCAGGAC TGGAGCTGCT CTTTAACTGC GTATCAAACT CTTTAACGTG TTCTCAGGAT 
GCTCTGATTT GTTTTGTACA CTGGGAAATA GTGAAAAGTG GCTATAAATG TATGGGCATT 
GGAGATGAGC CTAAAGATGG AGAGAAGAAG ACAGAATTGC TTCCTTCAGG CTGGAATGAA 
AGCAAAGAGC TTTATGCGCT CAGATACAGA TCAAATGATG ACAAATCCAA CCTACTGCTC 
AAAGCCTTCA CTGTGGATTC AAGCCTGATC TTCAATTTAA TGGATTCCAC GACAGAAAAA 
GTGACTGATC TCACAGTGAA CCTGAGCGAG TATGTTGACG AGGCCAATCT GCACACATTT 
GAAAGCGTGT TTAAGAACAC AGATGAGTTG ACTGCGAAAC TGAAGTCCTC GCTGCTGCCT 
TCCAAAAAAG AGGAGCGTCA AGGAAAGACA GAGAAGAAGA CAGAAAGAGA ACGAGCATCC 
AACTTAAGGG ACCCAGACAG TGATCCTCTC CTGATCCCAA CCAGAGGCCC TCCAGCCAGA 
CACCCTGCAA ACTGGCCTGA CCCCATGGCT CCGTTTGCAG CTGGTGGTGC AGATCTGGAC 
CCTTTTGGTG GAAGAGCCGG AGGAATGATT GTTGATCCAT TACGGGCCGG GTTTCCTCGC 
TCAGGCTTCG ACCCGTCCTC TGGTATTCCT GGAGTCCTTC CTCCAGGTGC GGTGCCTCCA 
GGTGCCCGCT TTGACCCCTT CGGTCCAGTC GGGCGACACA GACCCGGGCC AGACCCTGAT 
CACATGCCCC CTCCAGGATA TGATGACATG TTCATGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001002547.2
CDS	332..1150
Translation	MAGLELLFNCVSNSLTCSQDALICFVHWEIVKSGYKCMGIGDEPKDGEKKTELLPSGWNESKELYALRYRSNDDKSNLLLKAFTVDSSLIFNLMDSTTEKVTDLTVNLSEYVDEANLHTFESVFKNTDELTAKLKSSLLPSKKEERQGKTEKKTERERASNLRDPDSDPLLIPTRGPPARHPANWPDPMAPFAAGGADLDPFGGRAGGMIVDPLRAGFPRSGFDPSSGIPGVLPPGAVPPGARFDPFGPVGRHRPGPDPDHMPPPGYDDMFM

Target ORF information:

RefSeq Version	NM_001002547.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio proteasome inhibitor subunit 1 (psmf1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001002547.2

ORF Insert Sequence:

ATGGCAGGAC TGGAGCTGCT CTTTAACTGC GTATCAAACT CTTTAACGTG TTCTCAGGAT 
GCTCTGATTT GTTTTGTACA CTGGGAAATA GTGAAAAGTG GCTATAAATG TATGGGCATT 
GGAGATGAGC CTAAAGATGG AGAGAAGAAG ACAGAATTGC TTCCTTCAGG CTGGAATGAA 
AGCAAAGAGC TTTATGCGCT CAGATACAGA TCAAATGATG ACAAATCCAA CCTACTGCTC 
AAAGCCTTCA CTGTGGATTC AAGCCTGATC TTCAATTTAA TGGATTCCAC GACAGAAAAA 
GTGACTGATC TCACAGTGAA CCTGAGCGAG TATGTTGACG AGGCCAATCT GCACACATTT 
GAAAGCGTGT TTAAGAACAC AGATGAGTTG ACTGCGAAAC TGAAGTCCTC GCTGCTGCCT 
TCCAAAAAAG AGGAGCGTCA AGGAAAGACA GAGAAGAAGA CAGAAAGAGA ACGAGCATCC 
AACTTAAGGG ACCCAGACAG TGATCCTCTC CTGATCCCAA CCAGAGGCCC TCCAGCCAGA 
CACCCTGCAA ACTGGCCTGA CCCCATGGCT CCGTTTGCAG CTGGTGGTGC AGATCTGGAC 
CCTTTTGGTG GAAGAGCCGG AGGAATGATT GTTGATCCAT TACGGGCCGG GTTTCCTCGC 
TCAGGCTTCG ACCCGTCCTC TGGTATTCCT GGAGTCCTTC CTCCAGGTGC GGTGCCTCCA 
GGTGCCCGCT TTGACCCCTT CGGTCCAGTC GGGCGACACA GACCCGGGCC AGACCCTGAT 
CACATGCCCC CTCCAGGATA TGATGACATG TTCATGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Chromosomal deletions and inversions mediated by TALENs and CRISPR/Cas in zebrafish.
Nucleic acids research41(14)e141(2013 Aug)
Xiao A,Wang Z,Hu Y,Wu Y,Luo Z,Yang Z,Zu Y,Li W,Huang P,Tong X,Zhu Z,Lin S,Zhang B

RNA-seq liver transcriptome analysis reveals an activated MHC-I pathway and an inhibited MHC-II pathway at the early stage of vaccine immunization in zebrafish.
BMC genomics13319(2012 Jul)
Yang D,Liu Q,Yang M,Wu H,Wang Q,Xiao J,Zhang Y

Hematopoietic gene expression profile in zebrafish kidney marrow.
Proceedings of the National Academy of Sciences of the United States of America101(46)16240-5(2004 Nov)
Song HD,Sun XJ,Deng M,Zhang GW,Zhou Y,Wu XY,Sheng Y,Chen Y,Ruan Z,Jiang CL,Fan HY,Zon LI,Kanki JP,Liu TX,Look AT,Chen Z

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psmf1 cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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